Literature DB >> 23005256

Predictions for cholesterol interaction sites on the A2A adenosine receptor.

Ji Young Lee1, Edward Lyman.   

Abstract

Molecular dynamics simulations of the A(2A) adenosine receptor totaling 1.4 μs show clear evidence for specific sites mediating interactions between adenosine-bound A(2A) and cholesterol. The strongest evidence is for three binding sites. Two are in the extracellular leaflet, with one site interacting with helices VII and I, and the other with helices II and III. One site is located in the intracellular leaflet, interacting with helices III and IV. One of our three predicted binding sites is confirmed by a just-published high-resolution structure of A(2A) cocrystallized with an antagonist.

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Year:  2012        PMID: 23005256      PMCID: PMC3652312          DOI: 10.1021/ja307532d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

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Authors:  Michelle A O'Malley; Matthew E Helgeson; Norman J Wagner; Anne S Robinson
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

Review 2.  International Union of Basic and Clinical Pharmacology. LXXXI. Nomenclature and classification of adenosine receptors--an update.

Authors:  Bertil B Fredholm; Adriaan P IJzerman; Kenneth A Jacobson; Joel Linden; Christa E Müller
Journal:  Pharmacol Rev       Date:  2011-02-08       Impact factor: 25.468

3.  Structure of the adenosine A(2A) receptor in complex with ZM241385 and the xanthines XAC and caffeine.

Authors:  Andrew S Doré; Nathan Robertson; James C Errey; Irene Ng; Kaspar Hollenstein; Ben Tehan; Edward Hurrell; Kirstie Bennett; Miles Congreve; Francesca Magnani; Christopher G Tate; Malcolm Weir; Fiona H Marshall
Journal:  Structure       Date:  2011-09-07       Impact factor: 5.006

4.  Structure of an agonist-bound human A2A adenosine receptor.

Authors:  Fei Xu; Huixian Wu; Vsevolod Katritch; Gye Won Han; Kenneth A Jacobson; Zhan-Guo Gao; Vadim Cherezov; Raymond C Stevens
Journal:  Science       Date:  2011-03-10       Impact factor: 47.728

5.  Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis.

Authors:  Larisa Adamian; Hammad Naveed; Jie Liang
Journal:  Biochim Biophys Acta       Date:  2010-12-16

6.  The morphology and composition of cholesterol-rich micellar nanostructures determine transmembrane protein (GPCR) activity.

Authors:  Michelle A O'Malley; Matthew E Helgeson; Norman J Wagner; Anne S Robinson
Journal:  Biophys J       Date:  2011-01-19       Impact factor: 4.033

7.  A role for a specific cholesterol interaction in stabilizing the Apo configuration of the human A(2A) adenosine receptor.

Authors:  Edward Lyman; Chris Higgs; Byungchan Kim; Dmitry Lupyan; John C Shelley; Ramy Farid; Gregory A Voth
Journal:  Structure       Date:  2009-12-09       Impact factor: 5.006

Review 8.  Lipid rafts as a membrane-organizing principle.

Authors:  Daniel Lingwood; Kai Simons
Journal:  Science       Date:  2010-01-01       Impact factor: 47.728

9.  Agonist-bound adenosine A2A receptor structures reveal common features of GPCR activation.

Authors:  Guillaume Lebon; Tony Warne; Patricia C Edwards; Kirstie Bennett; Christopher J Langmead; Andrew G W Leslie; Christopher G Tate
Journal:  Nature       Date:  2011-05-18       Impact factor: 49.962

10.  G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody.

Authors:  Tomoya Hino; Takatoshi Arakawa; Hiroko Iwanari; Takami Yurugi-Kobayashi; Chiyo Ikeda-Suno; Yoshiko Nakada-Nakura; Osamu Kusano-Arai; Simone Weyand; Tatsuro Shimamura; Norimichi Nomura; Alexander D Cameron; Takuya Kobayashi; Takao Hamakubo; So Iwata; Takeshi Murata
Journal:  Nature       Date:  2012-01-29       Impact factor: 49.962

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  50 in total

1.  Cholesterol modulates the dimer interface of the β₂-adrenergic receptor via cholesterol occupancy sites.

Authors:  Xavier Prasanna; Amitabha Chattopadhyay; Durba Sengupta
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

2.  Membrane cholesterol depletion reduces downstream signaling activity of the adenosine A2A receptor.

Authors:  Claire McGraw; Lewen Yang; Ilya Levental; Edward Lyman; Anne Skaja Robinson
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-01-08       Impact factor: 3.747

3.  Lipids Alter Rhodopsin Function via Ligand-like and Solvent-like Interactions.

Authors:  Leslie A Salas-Estrada; Nicholas Leioatts; Tod D Romo; Alan Grossfield
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

4.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

5.  Impact of purification conditions and history on A2A adenosine receptor activity: The role of CHAPS and lipids.

Authors:  Andrea N Naranjo; Patrick M McNeely; John Katsaras; Anne Skaja Robinson
Journal:  Protein Expr Purif       Date:  2016-05-27       Impact factor: 1.650

6.  Can Specific Protein-Lipid Interactions Stabilize an Active State of the Beta 2 Adrenergic Receptor?

Authors:  Chris Neale; Henry D Herce; Régis Pomès; Angel E García
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

7.  Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation.

Authors:  Melanie P Muller; Tao Jiang; Chang Sun; Muyun Lihan; Shashank Pant; Paween Mahinthichaichan; Anda Trifan; Emad Tajkhorshid
Journal:  Chem Rev       Date:  2019-04-12       Impact factor: 60.622

8.  Identification of Two New Cholesterol Interaction Sites on the A2A Adenosine Receptor.

Authors:  Eric Rouviere; Clément Arnarez; Lewen Yang; Edward Lyman
Journal:  Biophys J       Date:  2017-12-05       Impact factor: 4.033

9.  Ligand-dependent cholesterol interactions with the human A(2A) adenosine receptor.

Authors:  Ji Young Lee; Rohan Patel; Edward Lyman
Journal:  Chem Phys Lipids       Date:  2013-02-27       Impact factor: 3.329

10.  A Streamlined, General Approach for Computing Ligand Binding Free Energies and Its Application to GPCR-Bound Cholesterol.

Authors:  Reza Salari; Thomas Joseph; Ruchi Lohia; Jérôme Hénin; Grace Brannigan
Journal:  J Chem Theory Comput       Date:  2018-11-13       Impact factor: 6.006

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