Literature DB >> 22987227

NMR assignments for the telokin-like domain of bacteriophage P22 coat protein.

Alessandro A Rizzo1, LaTasha C R Fraser, Sarah R Sheftic, Margaret M Suhanovsky, Carolyn M Teschke, Andrei T Alexandrescu.   

Abstract

The bacteriophage P22 virion is assembled from identical coat protein monomers in a complex reaction that is generally conserved among tailed, double-stranded DNA bacteriophages and viruses. Many coat proteins of dsDNA viruses have structures based on the HK97 fold, but in some viruses and phages there are additional domains. In the P22 coat protein, a "telokin-like" domain was recently identified, whose structure has not yet been characterized at high-resolution. Two recently published low-resolution cryo-EM reconstructions suggest markedly different folds for the telokin-like domain that lead to alternative conclusions about its function in capsid assembly and stability. Here we report (1)H, (15)N, and (13)C NMR resonance assignments for the telokin-like domain. The secondary structure predicted from the chemical shift values obtained in this work shows significant discrepancies from both cryo-EM models but agrees better with one of the models. In particular, the functionally important "D-loop" in one model shows chemical shifts and solvent exchange protection more consistent with β-sheet structure. Our work will set the basis for a high-resolution NMR structure determination of the telokin-like domain that will help improve the cryo-EM models, and in turn lead to a better understanding of how coat protein monomers assemble into the icosahedral capsids required for virulence.

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Year:  2012        PMID: 22987227      PMCID: PMC3537855          DOI: 10.1007/s12104-012-9422-x

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  11 in total

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Review 5.  'Let the phage do the work': using the phage P22 coat protein structures as a framework to understand its folding and assembly mutants.

Authors:  Carolyn M Teschke; Kristin N Parent
Journal:  Virology       Date:  2010-03-16       Impact factor: 3.616

6.  P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks.

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Journal:  Structure       Date:  2010-03-10       Impact factor: 5.006

7.  Bacteriophage P22 capsid size determination: roles for the coat protein telokin-like domain and the scaffolding protein amino-terminus.

Authors:  Margaret M Suhanovsky; Carolyn M Teschke
Journal:  Virology       Date:  2011-07-23       Impact factor: 3.616

8.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

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  7 in total

1.  An intramolecular chaperone inserted in bacteriophage P22 coat protein mediates its chaperonin-independent folding.

Authors:  Margaret M Suhanovsky; Carolyn M Teschke
Journal:  J Biol Chem       Date:  2013-10-13       Impact factor: 5.157

2.  Conservation and Divergence of the I-Domain Inserted into the Ubiquitous HK97 Coat Protein Fold in P22-Like Bacteriophages.

Authors:  Therese N Tripler; Anne R Kaplan; Andrei T Alexandrescu; Carolyn M Teschke
Journal:  J Virol       Date:  2019-04-17       Impact factor: 5.103

Review 3.  Nature's favorite building block: Deciphering folding and capsid assembly of proteins with the HK97-fold.

Authors:  Margaret M Suhanovsky; Carolyn M Teschke
Journal:  Virology       Date:  2015-04-08       Impact factor: 3.616

4.  Mechanism of Protein Denaturation: Partial Unfolding of the P22 Coat Protein I-Domain by Urea Binding.

Authors:  Rebecca L Newcomer; LaTasha C R Fraser; Carolyn M Teschke; Andrei T Alexandrescu
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

5.  A Molecular Staple: D-Loops in the I Domain of Bacteriophage P22 Coat Protein Make Important Intercapsomer Contacts Required for Procapsid Assembly.

Authors:  Nadia G D'Lima; Carolyn M Teschke
Journal:  J Virol       Date:  2015-08-12       Impact factor: 5.103

6.  Contextual Role of a Salt Bridge in the Phage P22 Coat Protein I-Domain.

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7.  Multiple functional roles of the accessory I-domain of bacteriophage P22 coat protein revealed by NMR structure and CryoEM modeling.

Authors:  Alessandro A Rizzo; Margaret M Suhanovsky; Matthew L Baker; LaTasha C R Fraser; Lisa M Jones; Don L Rempel; Michael L Gross; Wah Chiu; Andrei T Alexandrescu; Carolyn M Teschke
Journal:  Structure       Date:  2014-05-15       Impact factor: 5.006

  7 in total

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