Literature DB >> 20223221

P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks.

Kristin N Parent1, Reza Khayat, Long H Tu, Margaret M Suhanovsky, Juliana R Cortines, Carolyn M Teschke, John E Johnson, Timothy S Baker.   

Abstract

Viral capsid assembly and stability in tailed, dsDNA phage and Herpesviridae are achieved by various means including chemical crosslinks (unique to HK97), or auxiliary proteins (lambda, T4, phi29, and herpesviruses). All these viruses have coat proteins (CP) with a conserved, HK97-like core structure. We used a combination of trypsin digestion, gold labeling, cryo-electron microscopy, 3D image reconstruction, and comparative modeling to derive two independent, pseudoatomic models of bacteriophage P22 CP: before and after maturation. P22 capsid stabilization results from intersubunit interactions among N-terminal helices and an extensive "P loop," which obviate the need for crosslinks or auxiliary proteins. P22 CP also has a telokin-like Ig domain that likely stabilizes the monomer fold so that assembly may proceed via individual subunit addition rather than via preformed capsomers as occurs in HK97. Hence, the P22 CP structure may be a paradigm for understanding how monomers assemble in viruses like phi29 and HSV-1.

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Year:  2010        PMID: 20223221      PMCID: PMC2951021          DOI: 10.1016/j.str.2009.12.014

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  65 in total

Review 1.  Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs.

Authors:  T S Baker; N H Olson; S D Fuller
Journal:  Microbiol Mol Biol Rev       Date:  1999-12       Impact factor: 11.056

2.  Cryo-electron microscopic localization of protein L7/L12 within the Escherichia coli 70 S ribosome by difference mapping and Nanogold labeling.

Authors:  L Montesano-Roditis; D G Glitz; R R Traut; P L Stewart
Journal:  J Biol Chem       Date:  2001-01-30       Impact factor: 5.157

3.  Folding defects caused by single amino acid substitutions in a subunit are not alleviated by assembly.

Authors:  C M Capen; C M Teschke
Journal:  Biochemistry       Date:  2000-02-08       Impact factor: 3.162

4.  Identification and characterization of the domain structure of bacteriophage P22 coat protein.

Authors:  J Lanman; R Tuma; P E Prevelige
Journal:  Biochemistry       Date:  1999-11-02       Impact factor: 3.162

5.  Topologically linked protein rings in the bacteriophage HK97 capsid.

Authors:  W R Wikoff; L Liljas; R L Duda; H Tsuruta; R W Hendrix; J E Johnson
Journal:  Science       Date:  2000-09-22       Impact factor: 47.728

Review 6.  Bacteriophages: evolution of the majority.

Authors:  Roger W Hendrix
Journal:  Theor Popul Biol       Date:  2002-06       Impact factor: 1.570

7.  Novel fold and capsid-binding properties of the lambda-phage display platform protein gpD.

Authors:  F Yang; P Forrer; Z Dauter; J F Conway; N Cheng; M E Cerritelli; A C Steven; A Plückthun; A Wlodawer
Journal:  Nat Struct Biol       Date:  2000-03

8.  AUTO3DEM--an automated and high throughput program for image reconstruction of icosahedral particles.

Authors:  Xiaodong Yan; Robert S Sinkovits; Timothy S Baker
Journal:  J Struct Biol       Date:  2006-08-25       Impact factor: 2.867

9.  An antibody to the putative aphid recognition site on cucumber mosaic virus recognizes pentons but not hexons.

Authors:  Valorie D Bowman; Elaine S Chase; Alexander W E Franz; Paul R Chipman; Xing Zhang; Keith L Perry; Timothy S Baker; Thomas J Smith
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

Review 10.  Towards atomic resolution structural determination by single-particle cryo-electron microscopy.

Authors:  Z Hong Zhou
Journal:  Curr Opin Struct Biol       Date:  2008-04-09       Impact factor: 6.809

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  72 in total

1.  Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM.

Authors:  Gabriel C Lander; Anne-Claire Baudoux; Farooq Azam; Clinton S Potter; Bridget Carragher; John E Johnson
Journal:  Structure       Date:  2012-03-07       Impact factor: 5.006

2.  Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.

Authors:  Alina Ionel; Javier A Velázquez-Muriel; Daniel Luque; Ana Cuervo; José R Castón; José M Valpuesta; Jaime Martín-Benito; José L Carrascosa
Journal:  J Biol Chem       Date:  2010-10-20       Impact factor: 5.157

3.  A conformational switch involved in maturation of Staphylococcus aureus bacteriophage 80α capsids.

Authors:  Michael S Spilman; Altaira D Dearborn; Jenny R Chang; Priyadarshan K Damle; Gail E Christie; Terje Dokland
Journal:  J Mol Biol       Date:  2010-12-01       Impact factor: 5.469

4.  The host outer membrane proteins OmpA and OmpC are associated with the Shigella phage Sf6 virion.

Authors:  Haiyan Zhao; Reuben D Sequeira; Nadezhda A Galeva; Liang Tang
Journal:  Virology       Date:  2010-11-10       Impact factor: 3.616

5.  An intramolecular chaperone inserted in bacteriophage P22 coat protein mediates its chaperonin-independent folding.

Authors:  Margaret M Suhanovsky; Carolyn M Teschke
Journal:  J Biol Chem       Date:  2013-10-13       Impact factor: 5.157

6.  Sortase-Mediated Ligation as a Modular Approach for the Covalent Attachment of Proteins to the Exterior of the Bacteriophage P22 Virus-like Particle.

Authors:  Dustin Patterson; Benjamin Schwarz; John Avera; Brian Western; Matthew Hicks; Paul Krugler; Matthew Terra; Masaki Uchida; Kimberly McCoy; Trevor Douglas
Journal:  Bioconjug Chem       Date:  2017-06-30       Impact factor: 4.774

7.  Stepwise expansion of the bacteriophage ϕ6 procapsid: possible packaging intermediates.

Authors:  Daniel Nemecek; Naiqian Cheng; Jian Qiao; Leonard Mindich; Alasdair C Steven; J Bernard Heymann
Journal:  J Mol Biol       Date:  2011-10-12       Impact factor: 5.469

8.  Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus.

Authors:  Dong-Hua Chen; Matthew L Baker; Corey F Hryc; Frank DiMaio; Joanita Jakana; Weimin Wu; Matthew Dougherty; Cameron Haase-Pettingell; Michael F Schmid; Wen Jiang; David Baker; Jonathan A King; Wah Chiu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-10       Impact factor: 11.205

9.  Structure of a headful DNA-packaging bacterial virus at 2.9 Å resolution by electron cryo-microscopy.

Authors:  Haiyan Zhao; Kunpeng Li; Anna Y Lynn; Keith E Aron; Guimei Yu; Wen Jiang; Liang Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-20       Impact factor: 11.205

10.  Transient contacts on the exterior of the HK97 procapsid that are essential for capsid assembly.

Authors:  Dan-ju Tso; Roger W Hendrix; Robert L Duda
Journal:  J Mol Biol       Date:  2014-03-20       Impact factor: 5.469

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