Literature DB >> 22983972

Cross-site soil microbial communities under tillage regimes: fungistasis and microbial biomarkers.

Timo P Sipilä1, Kim Yrjälä, Laura Alakukku, Ansa Palojärvi.   

Abstract

The exploitation of soil ecosystem services by agricultural management strategies requires knowledge of microbial communities in different management regimes. Crop cover by no-till management protects the soil surface, reducing the risk of erosion and nutrient leaching, but might increase straw residue-borne and soilborne plant-pathogenic fungi. A cross-site study of soil microbial communities and Fusarium fungistasis was conducted on six long-term agricultural fields with no-till and moldboard-plowed treatments. Microbial communities were studied at the topsoil surface (0 to 5 cm) and bottom (10 to 20 cm) by general bacterial and actinobacterial terminal restriction fragment length polymorphism (T-RFLP) and phospholipid fatty acid (PLFA) analyses. Fusarium culmorum soil fungistasis describing soil receptivity to plant-pathogenic fungi was explored by using the surface layer method. Soil depth had a significant impact on general bacterial as well as actinobacterial communities and PLFA profiles in no-till treatment, with a clear spatial distinction of communities (P < 0.05), whereas the depth-related separation of microbial communities was not observed in plowed fields. The fungal biomass was higher in no-till surface soil than in plowed soil (P < 0.07). Soil total microbial biomass and fungal biomass correlated with fungistasis (P < 0.02 for the sum of PLFAs; P < 0.001 for PLFA 18:2ω6). Our cross-site study demonstrated that agricultural management strategies can have a major impact on soil microbial community structures, indicating that it is possible to influence the soil processes with management decisions. The interactions between plant-pathogenic fungi and soil microbial communities are multifaceted, and a high level of fungistasis could be linked to the high microbial biomass in soil but not to the specific management strategy.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22983972      PMCID: PMC3497356          DOI: 10.1128/AEM.02005-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  17 in total

1.  Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils.

Authors:  Martina S Girvan; Juliet Bullimore; Jules N Pretty; A Mark Osborn; Andrew S Ball
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

Review 2.  Microbial populations responsible for specific soil suppressiveness to plant pathogens.

Authors:  David M Weller; Jos M Raaijmakers; Brian B McSpadden Gardener; Linda S Thomashow
Journal:  Annu Rev Phytopathol       Date:  2002-05-13       Impact factor: 13.078

3.  Phylogenetic and multivariate analyses to determine the effects of different tillage and residue management practices on soil bacterial communities.

Authors:  Javier A Ceja-Navarro; Flor N Rivera-Orduña; Leonardo Patiño-Zúñiga; Antón Vila-Sanjurjo; José Crossa; Bram Govaerts; Luc Dendooven
Journal:  Appl Environ Microbiol       Date:  2010-04-09       Impact factor: 4.792

4.  Ordination and significance testing of microbial community composition derived from terminal restriction fragment length polymorphisms: application of multivariate statistics.

Authors:  Gavin N Rees; Darren S Baldwin; Garth O Watson; Shane Perryman; Daryl L Nielsen
Journal:  Antonie Van Leeuwenhoek       Date:  2004-11       Impact factor: 2.271

5.  The contribution of species richness and composition to bacterial services.

Authors:  Thomas Bell; Jonathan A Newman; Bernard W Silverman; Sarah L Turner; Andrew K Lilley
Journal:  Nature       Date:  2005-08-25       Impact factor: 49.962

6.  Disease-suppressive soil and root-colonizing bacteria.

Authors:  M N Schroth; J G Hancock
Journal:  Science       Date:  1982-06-25       Impact factor: 47.728

7.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

8.  In vitro suppression of fungi caused by combinations of apparently non-antagonistic soil bacteria.

Authors:  Wietse de Boer; Anne-Marieke Wagenaar; Paulien J A Klein Gunnewiek; Johannes A van Veen
Journal:  FEMS Microbiol Ecol       Date:  2007-01       Impact factor: 4.194

9.  Linking sequence to function in soil bacteria: sequence-directed isolation of novel bacteria contributing to soilborne plant disease suppression.

Authors:  María-Soledad Benítez; Brian B McSpadden Gardener
Journal:  Appl Environ Microbiol       Date:  2008-12-16       Impact factor: 4.792

10.  Volatile organic compounds: a potential direct long-distance mechanism for antagonistic action of Fusarium oxysporum strain MSA 35.

Authors:  Daniela Minerdi; Simone Bossi; Maria Lodovica Gullino; Angelo Garibaldi
Journal:  Environ Microbiol       Date:  2009-04       Impact factor: 5.491

View more
  5 in total

1.  Bacterial Community Diversity in Soil Under two Tillage Practices as Determined by Pyrosequencing.

Authors:  Aditi Sengupta; Warren A Dick
Journal:  Microb Ecol       Date:  2015-05-02       Impact factor: 4.552

2.  Tillage Changes Vertical Distribution of Soil Bacterial and Fungal Communities.

Authors:  Ruibo Sun; Wenyan Li; Wenxu Dong; Yinping Tian; Chunsheng Hu; Binbin Liu
Journal:  Front Microbiol       Date:  2018-04-09       Impact factor: 5.640

3.  Community structure of soil fungi in a novel perennial crop monoculture, annual agriculture, and native prairie reconstruction.

Authors:  Thomas P McKenna; Timothy E Crews; Laura Kemp; Benjamin A Sikes
Journal:  PLoS One       Date:  2020-01-30       Impact factor: 3.240

4.  Legacy effects of anaerobic soil disinfestation on soil bacterial community composition and production of pathogen-suppressing volatiles.

Authors:  Maaike van Agtmaal; Gera J van Os; W H Gera Hol; Maria P J Hundscheid; Willemien T Runia; Cornelis A Hordijk; Wietse de Boer
Journal:  Front Microbiol       Date:  2015-07-10       Impact factor: 5.640

5.  Tillage System and Crop Sequence Affect Soil Disease Suppressiveness and Carbon Status in Boreal Climate.

Authors:  Ansa Palojärvi; Miriam Kellock; Päivi Parikka; Lauri Jauhiainen; Laura Alakukku
Journal:  Front Microbiol       Date:  2020-10-23       Impact factor: 5.640

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.