Literature DB >> 22965918

Haloalkane dehalogenases: biotechnological applications.

Tana Koudelakova1, Sarka Bidmanova, Pavel Dvorak, Antonin Pavelka, Radka Chaloupkova, Zbynek Prokop, Jiri Damborsky.   

Abstract

Haloalkane dehalogenases (EC 3.8.1.5, HLDs) are α/β-hydrolases which act to cleave carbon-halogen bonds. Due to their unique catalytic mechanism, broad substrate specificity and high robustness, the members of this enzyme family have been employed in several practical applications: (i) biocatalytic preparation of optically pure building-blocks for organic synthesis; (ii) recycling of by-products from chemical processes; (iii) bioremediation of toxic environmental pollutants; (iv) decontamination of warfare agents; (v) biosensing of environmental pollutants; and (vi) protein tagging for cell imaging and protein analysis. This review discusses the application of HLDs in the context of the biochemical properties of individual enzymes. Further extension of HLD uses within the field of biotechnology will require currently limiting factors - such as low expression, product inhibition, insufficient enzyme selectivity, low affinity and catalytic efficiency towards selected substrates, and instability in the presence of organic co-solvents - to be overcome. We propose that strategies based on protein engineering and isolation of novel HLDs from extremophilic microorganisms may offer solutions.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22965918     DOI: 10.1002/biot.201100486

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  27 in total

1.  Crystallographic analysis of new psychrophilic haloalkane dehalogenases: DpcA from Psychrobacter cryohalolentis K5 and DmxA from Marinobacter sp. ELB17.

Authors:  Katsiaryna Tratsiak; Oksana Degtjarik; Ivana Drienovska; Lukas Chrast; Pavlina Rezacova; Michal Kuty; Radka Chaloupkova; Jiri Damborsky; Ivana Kuta Smatanova
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-25

2.  Conformational changes allow processing of bulky substrates by a haloalkane dehalogenase with a small and buried active site.

Authors:  Piia Kokkonen; David Bednar; Veronika Dockalova; Zbynek Prokop; Jiri Damborsky
Journal:  J Biol Chem       Date:  2018-06-01       Impact factor: 5.157

3.  A Haloalkane Dehalogenase from a Marine Microbial Consortium Possessing Exceptionally Broad Substrate Specificity.

Authors:  Tomas Buryska; Petra Babkova; Ondrej Vavra; Jiri Damborsky; Zbynek Prokop
Journal:  Appl Environ Microbiol       Date:  2018-01-02       Impact factor: 4.792

4.  A Haloalkane Dehalogenase from Saccharomonospora viridis Strain DSM 43017, a Compost Bacterium with Unusual Catalytic Residues, Unique (S)-Enantiopreference, and High Thermostability.

Authors:  Klaudia Chmelova; Eva Sebestova; Veronika Liskova; Andy Beier; David Bednar; Zbynek Prokop; Radka Chaloupkova; Jiri Damborsky
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

5.  In silico design of potentially functional artificial metallo-haloalkane dehalogenase containing catalytic zinc.

Authors:  Abu Bakar Salleh; Yahaya M Normi; Thiau-Fu Ang; Thean Chor Leow
Journal:  3 Biotech       Date:  2018-07-12       Impact factor: 2.406

6.  Bacillus subtilis Spore Surface Display of Haloalkane Dehalogenase DhaA.

Authors:  Fuli Wang; Tianyu Song; Hui Jiang; Chengxin Pei; Qibin Huang; Hailing Xi
Journal:  Curr Microbiol       Date:  2019-07-05       Impact factor: 2.188

7.  A New Catabolic Plasmid in Xanthobacter and Starkeya spp. from a 1,2-Dichloroethane-Contaminated Site.

Authors:  Jacob E Munro; Elissa F Liew; Mai-Anh Ly; Nicholas V Coleman
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

8.  Discovery of Novel Haloalkane Dehalogenase Inhibitors.

Authors:  Tomas Buryska; Lukas Daniel; Antonin Kunka; Jan Brezovsky; Jiri Damborsky; Zbynek Prokop
Journal:  Appl Environ Microbiol       Date:  2016-01-15       Impact factor: 4.792

9.  Biochemical characterization of two haloalkane dehalogenases: DccA from Caulobacter crescentus and DsaA from Saccharomonospora azurea.

Authors:  Lauren Carlucci; Edward Zhou; Vladimir N Malashkevich; Steven C Almo; Emily C Mundorff
Journal:  Protein Sci       Date:  2016-02-21       Impact factor: 6.725

10.  Sorting by interfacial tension (SIFT): Label-free enzyme sorting using droplet microfluidics.

Authors:  Daniel G Horvath; Samuel Braza; Trevor Moore; Ching W Pan; Lailai Zhu; On Shun Pak; Paul Abbyad
Journal:  Anal Chim Acta       Date:  2019-08-17       Impact factor: 6.558

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