Literature DB >> 22965097

Genome sequence of Pseudomonas stutzeri strain JM300 (DSM 10701), a soil isolate and model organism for natural transformation.

Antonio Busquets1, Arantxa Peña, Margarita Gomila, Rafael Bosch, Balbina Nogales, Elena García-Valdés, Jorge Lalucat, Antoni Bennasar.   

Abstract

Pseudomonas stutzeri strain JM300 (DSM 10701) is a denitrifying soil isolate and a model organism for natural transformation in bacteria. Here we report the first complete genome sequence of JM300, the reference strain of genomovar 8 for the species.

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Year:  2012        PMID： 22965097      PMCID： PMC3457215          DOI： 10.1128/JB.01257-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  14 in total

Review 1.  DNA uptake during bacterial transformation.

Authors:  Inês Chen; David Dubnau
Journal:  Nat Rev Microbiol       Date:  2004-03       Impact factor: 60.633

2.  Highly different levels of natural transformation are associated with genomic subgroups within a local population of Pseudomonas stutzeri from soil.

Authors:  Johannes Sikorski; Nicole Teschner; Wilfried Wackernagel
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

3.  The potential for intraspecific horizontal gene exchange by natural genetic transformation: sexual isolation among genomovars of Pseudomonas stutzeri.

Authors:  M G Lorenz; J Sikorski
Journal:  Microbiology       Date:  2000-12       Impact factor: 2.777

Review 4.  Bacterial gene transfer by natural genetic transformation in the environment.

Authors:  M G Lorenz; W Wackernagel
Journal:  Microbiol Rev       Date:  1994-09

5.  Draft genome of Pseudomonas stutzeri strain ZoBell (CCUG 16156), a marine isolate and model organism for denitrification studies.

Authors:  Arantxa Peña; Antonio Busquets; Margarita Gomila; Rafael Bosch; Balbina Nogales; Elena García-Valdés; Jorge Lalucat; Antonio Bennasar
Journal:  J Bacteriol       Date:  2012-03       Impact factor: 3.490

6.  Pseudomonas stutzeri and related species undergo natural transformation.

Authors:  C A Carlson; L S Pierson; J J Rosen; J L Ingraham
Journal:  J Bacteriol       Date:  1983-01       Impact factor: 3.490

7.  Comparative genetic diversity of Pseudomonas stutzeri genomovars, clonal structure, and phylogeny of the species.

Authors:  Aina Maria Cladera; Antonio Bennasar; Maria Barceló; Jorge Lalucat; Elena García-Valdés
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

8.  Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501.

Authors:  Yongliang Yan; Jian Yang; Yuetan Dou; Ming Chen; Shuzhen Ping; Junping Peng; Wei Lu; Wei Zhang; Ziying Yao; Hongquan Li; Wei Liu; Sheng He; Lizhao Geng; Xiaobing Zhang; Fan Yang; Haiying Yu; Yuhua Zhan; Danhua Li; Zhanglin Lin; Yiping Wang; Claudine Elmerich; Min Lin; Qi Jin
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-21       Impact factor: 11.205

9.  Phylogenetic analysis and siderotyping as useful tools in the taxonomy of Pseudomonas stutzeri: description of a novel genomovar.

Authors:  Magdalena Mulet; Margarita Gomila; Christelle Gruffaz; Jean-Marie Meyer; Norberto J Palleroni; Jorge Lalucat; Elena García-Valdés
Journal:  Int J Syst Evol Microbiol       Date:  2008-10       Impact factor: 2.747

10.  Aggressive assembly of pyrosequencing reads with mates.

Authors:  Jason R Miller; Arthur L Delcher; Sergey Koren; Eli Venter; Brian P Walenz; Anushka Brownley; Justin Johnson; Kelvin Li; Clark Mobarry; Granger Sutton
Journal:  Bioinformatics       Date:  2008-10-24       Impact factor: 6.937
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  15 in total

1.  Complete genome sequence of the naphthalene-degrading bacterium Pseudomonas stutzeri AN10 (CCUG 29243).

Authors:  Isabel Brunet-Galmés; Antonio Busquets; Arantxa Peña; Margarita Gomila; Balbina Nogales; Elena García-Valdés; Jorge Lalucat; Antonio Bennasar; Rafael Bosch
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

2.  Purification and characterization of a dehalogenase from Pseudomonas stutzeri DEH130 isolated from the marine sponge Hymeniacidon perlevis.

Authors:  Jinyou Zhang; Xupeng Cao; Yanjuan Xin; Song Xue; Wei Zhang
Journal:  World J Microbiol Biotechnol       Date:  2013-03-31       Impact factor: 3.312

3.  Retraction ATPase Motors from Three Orthologous Type IVa Pilus Systems Support Promiscuous Retraction of the Vibrio cholerae Competence Pilus.

Authors:  Evan Couser; Jennifer L Chlebek; Ankur B Dalia
Journal:  J Bacteriol       Date:  2022-05-04       Impact factor: 3.476

4.  Whole-cell MALDI-TOF mass spectrometry and multilocus sequence analysis in the discrimination of Pseudomonas stutzeri populations: three novel genomovars.

Authors:  Claudia Scotta; Margarita Gomila; Magdalena Mulet; Jorge Lalucat; Elena García-Valdés
Journal:  Microb Ecol       Date:  2013-06-04       Impact factor: 4.552

5.  Draft Genome Sequence of the Toluene-Degrading Pseudomonas stutzeri Strain ST-9.

Authors:  Margarita Gomila; Antonio Busquets; Elena García-Valdés; Esti Michael; Rivka Cahan; Yeshayahu Nitzan; Jorge Lalucat
Journal:  Genome Announc       Date:  2015-06-04

6.  Draft Genome Sequence of Pseudomonas azotifigens Strain DSM 17556T (6H33bT), a Nitrogen Fixer Strain Isolated from a Compost Pile.

Authors:  Antonio Busquets; Arantxa Peña; Margarita Gomila; Magdalena Mulet; Joan Mayol; Elena García-Valdés; Antonio Bennasar; Marcel Huntemann; James Han; I-Min Chen; Konstantinos Mavromatis; Victor Markowitz; Krishnaveni Palaniappan; Natalia Ivanova; Andrew Schaumberg; Amrita Pati; T B K Reddy; Henrik Nordberg; Tanja Woyke; Hans-Peter Klenk; Nikos Kyrpides; Jorge Lalucat
Journal:  Genome Announc       Date:  2013-10-31

7.  Multiple phenotypic changes associated with large-scale horizontal gene transfer.

Authors:  Kevin Dougherty; Brian A Smith; Autumn F Moore; Shannon Maitland; Chris Fanger; Rachel Murillo; David A Baltrus
Journal:  PLoS One       Date:  2014-07-21       Impact factor: 3.240

8.  Draft Genome of Pseudomonas stutzeri Strain NF13, a Nitrogen Fixer Isolated from the Galapagos Rift Hydrothermal Vent.

Authors:  Arantxa Peña; Antonio Busquets; Margarita Gomila; Joan Mayol; Rafael Bosch; Balbina Nogales; Elena García-Valdés; Antonio Bennasar; Jorge Lalucat
Journal:  Genome Announc       Date:  2013-03-21

9.  Draft Genome of the Nitrogen-Fixing Bacterium Pseudomonas stutzeri Strain KOS6 Isolated from Industrial Hydrocarbon Sludge.

Authors:  Tatiana V Grigoryeva; Aleksandr V Laikov; Rimma P Naumova; Aleksandr I Manolov; Andrey K Larin; Irina Y Karpova; Tatiana A Semashko; Dmitry G Alexeev; Elena S Kostryukova; Rudolf Müller; Vadim M Govorun
Journal:  Genome Announc       Date:  2013-01-31

10.  Draft Genome Sequence of Pseudomonas stutzeri Strain B1SMN1, a Nitrogen-Fixing and Naphthalene-Degrading Strain Isolated from Wastewater.

Authors:  Antonio Busquets; Arantxa Peña; Margarita Gomila; Joan Mayol; Rafael Bosch; Balbina Nogales; Elena García-Valdés; Antonio Bennasar; Jorge Lalucat
Journal:  Genome Announc       Date:  2013-08-08
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