Literature DB >> 22962262

Ion transport through a graphene nanopore.

Guohui Hu1, Mao Mao, Sandip Ghosal.   

Abstract

Molecular dynamics simulation is utilized to investigate the ionic transport of NaCl in solution through a graphene nanopore under an applied electric field. Results show the formation of concentration polarization layers in the vicinity of the graphene sheet. The nonuniformity of the ion distribution gives rise to an electric pressure which drives vortical motions in the fluid if the electric field is sufficiently strong to overcome the influence of viscosity and thermal fluctuations. The relative importance of hydrodynamic transport and thermal fluctuations in determining the pore conductivity is investigated. A second important effect that is observed is the mass transport of water through the nanopore, with an average velocity proportional to the applied voltage and independent of the pore diameter. The flux arises as a consequence of the asymmetry in the ion distribution which can be attributed to differing mobilities of the sodium and chlorine ions and to the polarity of water molecules. The accumulation of liquid molecules in the vicinity of the nanopore due to re-orientation of the water dipoles by the local electric field is seen to result in a local increase in the liquid density. Results confirm that the electric conductance is proportional to the nanopore diameter for the parameter regimes that we simulated. The occurrence of fluid vortices is found to result in an increase in the effective electrical conductance.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22962262      PMCID: PMC3446844          DOI: 10.1088/0957-4484/23/39/395501

Source DB:  PubMed          Journal:  Nanotechnology        ISSN: 0957-4484            Impact factor:   3.874


  31 in total

1.  DNA translocation through graphene nanopores.

Authors:  Grégory F Schneider; Stefan W Kowalczyk; Victor E Calado; Grégory Pandraud; Henny W Zandbergen; Lieven M K Vandersypen; Cees Dekker
Journal:  Nano Lett       Date:  2010-08-11       Impact factor: 11.189

2.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

3.  Translocation of double-strand DNA through a silicon oxide nanopore.

Authors:  A J Storm; J H Chen; H W Zandbergen; C Dekker
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-05-06

Review 4.  Nanopore sequencing technology: research trends and applications.

Authors:  Minsoung Rhee; Mark A Burns
Journal:  Trends Biotechnol       Date:  2006-10-19       Impact factor: 19.536

5.  Effect of salt concentration on the electrophoretic speed of a polyelectrolyte through a nanopore.

Authors:  Sandip Ghosal
Journal:  Phys Rev Lett       Date:  2007-06-07       Impact factor: 9.161

Review 6.  Theoretical and computational models of biological ion channels.

Authors:  Benoît Roux; Toby Allen; Simon Bernèche; Wonpil Im
Journal:  Q Rev Biophys       Date:  2004-02       Impact factor: 5.318

7.  Electrokinetic-flow-induced viscous drag on a tethered DNA inside a nanopore.

Authors:  Sandip Ghosal
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-12-26

Review 8.  Nanoscale wetting under electric field from molecular simulations.

Authors:  Christopher D Daub; Dusan Bratko; Alenka Luzar
Journal:  Top Curr Chem       Date:  2012

9.  Computational investigation of DNA detection using graphene nanopores.

Authors:  Chaitanya Sathe; Xueqing Zou; Jean-Pierre Leburton; Klaus Schulten
Journal:  ACS Nano       Date:  2011-10-13       Impact factor: 15.881

Review 10.  The potential and challenges of nanopore sequencing.

Authors:  Daniel Branton; David W Deamer; Andre Marziali; Hagan Bayley; Steven A Benner; Thomas Butler; Massimiliano Di Ventra; Slaven Garaj; Andrew Hibbs; Xiaohua Huang; Stevan B Jovanovich; Predrag S Krstic; Stuart Lindsay; Xinsheng Sean Ling; Carlos H Mastrangelo; Amit Meller; John S Oliver; Yuriy V Pershin; J Michael Ramsey; Robert Riehn; Gautam V Soni; Vincent Tabard-Cossa; Meni Wanunu; Matthew Wiggin; Jeffery A Schloss
Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

View more
  8 in total

1.  Maxwell-Hall access resistance in graphene nanopores.

Authors:  Subin Sahu; Michael Zwolak
Journal:  Phys Chem Chem Phys       Date:  2018-02-14       Impact factor: 3.676

2.  Colloquium: Ionic phenomena in nanoscale pores through 2D materials.

Authors:  Subin Sahu; Michael Zwolak
Journal:  Rev Mod Phys       Date:  2019       Impact factor: 54.494

3.  Water and ion permeability of a claudin model: A computational study.

Authors:  Rozita Laghaei; Alan S L Yu; Rob D Coalson
Journal:  Proteins       Date:  2016-02-01

4.  Surface modification of graphene nanopores for protein translocation.

Authors:  Y P Shan; P B Tiwari; P Krishnakumar; I Vlassiouk; W Z Li; X W Wang; Y Darici; S M Lindsay; H D Wang; S Smirnov; J He
Journal:  Nanotechnology       Date:  2013-11-14       Impact factor: 3.874

5.  Hydrodynamic flow in the vicinity of a nanopore induced by an applied voltage.

Authors:  Mao Mao; Sandip Ghosal; Guohui Hu
Journal:  Nanotechnology       Date:  2013-05-20       Impact factor: 3.874

6.  Electric control of ionic transport in sub-nm nanopores.

Authors:  Anping Ji; Yunfei Chen
Journal:  RSC Adv       Date:  2021-04-13       Impact factor: 3.361

7.  Ion transport through a nanoporous C2N membrane: the effect of electric field and layer number.

Authors:  You-Sheng Yu; Lu-Yi Huang; Xiang Lu; Hong-Ming Ding
Journal:  RSC Adv       Date:  2018-10-30       Impact factor: 4.036

8.  Exploring the pore charge dependence of K+ and Cl- permeation across a graphene monolayer: a molecular dynamics study.

Authors:  Carlo Guardiani; William A T Gibby; Miraslau L Barabash; Dmitry G Luchinsky; Peter V E McClintock
Journal:  RSC Adv       Date:  2019-07-01       Impact factor: 3.361

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.