Literature DB >> 22956496

Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancer.

Shannon R Morey Kinney1, Sriharsa Pradhan.   

Abstract

5-Hydroxymethylcytosine (5hmC) is an oxidative product of 5-methylcytosine (5mC), catalyzed by the ten eleven translocation (TET) family of enzymes. Although 5hmC was discovered several decades ago, it was only after its recent identification in murine brain and stem cell DNA that it has become a major focus of epigenomic research. Part of the reason for this delay is due to the difficulty in detecting both global and locus-specific 5hmC levels. Several studies have addressed this issue with the development of novel techniques to locate and measure 5hmC, which led to multiple reports detailing 5hmC patterns in stem cells and global 5hmC levels during embryogenesis. Based on these studies of 5hmC levels and reports of tissue-specific TET expression, these enzymes are thought to play a role in mammalian development and differentiation. In addition, the TET enzymes are mutated in several types of cancer, affecting their activity and likely altering genomic 5hmC and 5mC patterns. Furthermore, oxidation of 5mC appears to be a step in several active DNA demethylation pathways, which may be important for normal processes, as well as global hypomethylation during cancer development and progression. Much has been revealed about this interesting DNA modification in recent years, but more research is needed for understanding the role of TET proteins and 5hmC in gene regulation and disease.

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Year:  2013        PMID: 22956496     DOI: 10.1007/978-1-4419-9967-2_3

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  25 in total

1.  Epigenetics, vitamin supplements and cellular reprogramming.

Authors:  Martin F Pera
Journal:  Nat Genet       Date:  2013-12       Impact factor: 38.330

2.  Identification of TET1 Partners That Control Its DNA-Demethylating Function.

Authors:  Pierre-François Cartron; Arulraj Nadaradjane; Fiona Lepape; Lisenn Lalier; Betty Gardie; François M Vallette
Journal:  Genes Cancer       Date:  2013-05

Review 3.  Causes of genome instability: the effect of low dose chemical exposures in modern society.

Authors:  Sabine A S Langie; Gudrun Koppen; Daniel Desaulniers; Fahd Al-Mulla; Rabeah Al-Temaimi; Amedeo Amedei; Amaya Azqueta; William H Bisson; Dustin G Brown; Gunnar Brunborg; Amelia K Charles; Tao Chen; Annamaria Colacci; Firouz Darroudi; Stefano Forte; Laetitia Gonzalez; Roslida A Hamid; Lisbeth E Knudsen; Luc Leyns; Adela Lopez de Cerain Salsamendi; Lorenzo Memeo; Chiara Mondello; Carmel Mothersill; Ann-Karin Olsen; Sofia Pavanello; Jayadev Raju; Emilio Rojas; Rabindra Roy; Elizabeth P Ryan; Patricia Ostrosky-Wegman; Hosni K Salem; A Ivana Scovassi; Neetu Singh; Monica Vaccari; Frederik J Van Schooten; Mahara Valverde; Jordan Woodrick; Luoping Zhang; Nik van Larebeke; Micheline Kirsch-Volders; Andrew R Collins
Journal:  Carcinogenesis       Date:  2015-06       Impact factor: 4.944

4.  Notch Pathway Is Activated via Genetic and Epigenetic Alterations and Is a Therapeutic Target in Clear Cell Renal Cancer.

Authors:  Tushar D Bhagat; Yiyu Zou; Shizheng Huang; Jihwan Park; Matthew B Palmer; Caroline Hu; Weijuan Li; Niraj Shenoy; Orsolya Giricz; Gaurav Choudhary; Yiting Yu; Yi-An Ko; María C Izquierdo; Ae Seo Deok Park; Nishanth Vallumsetla; Remi Laurence; Robert Lopez; Masako Suzuki; James Pullman; Justin Kaner; Benjamin Gartrell; A Ari Hakimi; John M Greally; Bharvin Patel; Karim Benhadji; Kith Pradhan; Amit Verma; Katalin Susztak
Journal:  J Biol Chem       Date:  2016-12-01       Impact factor: 5.157

Review 5.  A Tox21 Approach to Altered Epigenetic Landscapes: Assessing Epigenetic Toxicity Pathways Leading to Altered Gene Expression and Oncogenic Transformation In Vitro.

Authors:  Craig L Parfett; Daniel Desaulniers
Journal:  Int J Mol Sci       Date:  2017-06-01       Impact factor: 5.923

Review 6.  DNMT3A: the DioNysian MonsTer of acute myeloid leukaemia.

Authors:  Emma Conway O'Brien; John Brewin; Timothy Chevassut
Journal:  Ther Adv Hematol       Date:  2014-12

Review 7.  Epigenetics and vascular diseases.

Authors:  Matthew S Stratton; Floriana Maria Farina; Leonardo Elia
Journal:  J Mol Cell Cardiol       Date:  2019-06-15       Impact factor: 5.000

8.  Pol β gap filling, DNA ligation and substrate-product channeling during base excision repair opposite oxidized 5-methylcytosine modifications.

Authors:  Melike Çağlayan
Journal:  DNA Repair (Amst)       Date:  2020-08-14

Review 9.  Integrating DNA methylation dynamics into a framework for understanding epigenetic codes.

Authors:  Keith E Szulwach; Peng Jin
Journal:  Bioessays       Date:  2013-11-18       Impact factor: 4.345

10.  Polycomb-mediated silencing in neuroendocrine prostate cancer.

Authors:  Pier-Luc Clermont; Dong Lin; Francesco Crea; Rebecca Wu; Hui Xue; Yuwei Wang; Kelsie L Thu; Wan L Lam; Colin C Collins; Yuzhuo Wang; Cheryl D Helgason
Journal:  Clin Epigenetics       Date:  2015-04-03       Impact factor: 6.551

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