Literature DB >> 22949188

Purification, crystallization and preliminary X-ray characterization of the Acetivibrio cellulolyticus type I cohesin ScaC in complex with the ScaB dockerin.

Kate Cameron1, Victor D Alves, Pedro Bule, Luís M A Ferreira, Carlos M G A Fontes, Shabir Najmudin.   

Abstract

The cellulosome, a highly elaborate extracellular multi-enzyme complex of cellulases and hemicellulases, is responsible for the efficient degradation of plant cell-wall carbohydrates by anaerobic microorganisms. Cohesin and dockerin recognition pairs are integral to the architecture of the cellulosome. Thus, type I cohesin:dockerins are important for attaching the modular enzymatic components to primary scaffoldins to form the cellulosome. In contrast, type II dockerins located in primary scaffoldins bind to anchoring scaffoldins, thus contributing to the cell-surface attachment of the entire complex. Since anchoring scaffoldins usually contain more than one type II cohesin, they contribute to the assembly of polycellulosomes. Acetivibrio cellulolyticus possesses an extremely complex cellulosome arrangement which is organized by a primary enzyme-binding scaffoldin (ScaA), two anchoring scaffoldins (ScaC and ScaD) and an unusual adaptor scaffoldin (ScaB). A ScaB dockerin mutated to inactivate one of the two putative cohesin-binding interfaces complexed with the ScaC cohesin from A. cellulolyticus has been purified and crystallized and data were collected from tetragonal and monoclinic crystal forms to resolutions of 1.5 and 6.0 Å, respectively.

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Year:  2012        PMID: 22949188      PMCID: PMC3433191          DOI: 10.1107/S1744309112031922

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Escherichia coli expression, purification, crystallization, and structure determination of bacterial cohesin-dockerin complexes.

Authors:  Joana L A Brás; Ana Luisa Carvalho; Aldino Viegas; Shabir Najmudin; Victor D Alves; José A M Prates; Luís M A Ferreira; Maria J Romão; Harry J Gilbert; Carlos M G A Fontes
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

2.  Mechanism of bacterial cell-surface attachment revealed by the structure of cellulosomal type II cohesin-dockerin complex.

Authors:  Jarrett J Adams; Gour Pal; Zongchao Jia; Steven P Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-29       Impact factor: 11.205

3.  Automated data collection for macromolecular crystallography.

Authors:  Graeme Winter; Katherine E McAuley
Journal:  Methods       Date:  2011-07-07       Impact factor: 3.608

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  The cellulosome system of Acetivibrio cellulolyticus includes a novel type of adaptor protein and a cell surface anchoring protein.

Authors:  Qi Xu; Wenchen Gao; Shi-You Ding; Rina Kenig; Yuval Shoham; Edward A Bayer; Raphael Lamed
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

6.  Evidence for a dual binding mode of dockerin modules to cohesins.

Authors:  Ana Luísa Carvalho; Fernando M V Dias; Tibor Nagy; José A M Prates; Mark R Proctor; Nicola Smith; Edward A Bayer; Gideon J Davies; Luís M A Ferreira; Maria J Romão; Carlos M G A Fontes; Harry J Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-20       Impact factor: 11.205

Review 7.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

8.  Xyloglucan is recognized by carbohydrate-binding modules that interact with beta-glucan chains.

Authors:  Shabir Najmudin; Catarina I P D Guerreiro; Ana L Carvalho; José A M Prates; Márcia A S Correia; Victor D Alves; Luís M A Ferreira; Maria J Romão; Harry J Gilbert; David N Bolam; Carlos M G A Fontes
Journal:  J Biol Chem       Date:  2005-11-28       Impact factor: 5.157

9.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  BALBES: a molecular-replacement pipeline.

Authors:  Fei Long; Alexei A Vagin; Paul Young; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
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  3 in total

1.  Cell-surface Attachment of Bacterial Multienzyme Complexes Involves Highly Dynamic Protein-Protein Anchors.

Authors:  Kate Cameron; Shabir Najmudin; Victor D Alves; Edward A Bayer; Steven P Smith; Pedro Bule; Helen Waller; Luís M A Ferreira; Harry J Gilbert; Carlos M G A Fontes
Journal:  J Biol Chem       Date:  2015-04-08       Impact factor: 5.157

2.  Purification, crystallization and preliminary X-ray characterization of the third ScaB cohesin in complex with an ScaA X-dockerin from Acetivibrio cellulolyticus.

Authors:  Kate Cameron; Victor D Alves; Pedro Bule; Luís M A Ferreira; Carlos M G A Fontes; Shabir Najmudin
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-25       Impact factor: 1.056

3.  Overexpression, crystallization and preliminary X-ray characterization of Ruminococcus flavefaciens scaffoldin C cohesin in complex with a dockerin from an uncharacterized CBM-containing protein.

Authors:  Pedro Bule; Vered Ruimy-Israeli; Vânia Cardoso; Edward A Bayer; Carlos M G A Fontes; Shabir Najmudin
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-07-23       Impact factor: 1.056

  3 in total

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