Literature DB >> 22942787

Nanoinformatics: developing new computing applications for nanomedicine.

V Maojo1, M Fritts, F Martin-Sanchez, D De la Iglesia, R E Cachau, M Garcia-Remesal, J Crespo, J A Mitchell, A Anguita, N Baker, J M Barreiro, S E Benitez, G De la Calle, J C Facelli, P Ghazal, A Geissbuhler, F Gonzalez-Nilo, N Graf, P Grangeat, I Hermosilla, R Hussein, J Kern, S Koch, Y Legre, V Lopez-Alonso, G Lopez-Campos, L Milanesi, V Moustakis, C Munteanu, P Otero, A Pazos, D Perez-Rey, G Potamias, F Sanz, C Kulikowski.   

Abstract

Nanoinformatics has recently emerged to address the need of computing applications at the nano level. In this regard, the authors have participated in various initiatives to identify its concepts, foundations and challenges. While nanomaterials open up the possibility for developing new devices in many industrial and scientific areas, they also offer breakthrough perspectives for the prevention, diagnosis and treatment of diseases. In this paper, we analyze the different aspects of nanoinformatics and suggest five research topics to help catalyze new research and development in the area, particularly focused on nanomedicine. We also encompass the use of informatics to further the biological and clinical applications of basic research in nanoscience and nanotechnology, and the related concept of an extended "nanotype" to coalesce information related to nanoparticles. We suggest how nanoinformatics could accelerate developments in nanomedicine, similarly to what happened with the Human Genome and other -omics projects, on issues like exchanging modeling and simulation methods and tools, linking toxicity information to clinical and personal databases or developing new approaches for scientific ontologies, among many others.

Entities:  

Year:  2012        PMID: 22942787      PMCID: PMC3430140          DOI: 10.1007/s00607-012-0191-2

Source DB:  PubMed          Journal:  Comput Sci Eng        ISSN: 1521-9615            Impact factor:   2.080


  21 in total

1.  The micro-macro spectrum of medical informatics challenges: from molecular medicine to transforming health care in a globalizing society.

Authors:  C A Kulikowski
Journal:  Methods Inf Med       Date:  2002       Impact factor: 2.176

2.  Bioinformatics and clinical informatics: the imperative to collaborate.

Authors:  I S Kohane
Journal:  J Am Med Inform Assoc       Date:  2000 Sep-Oct       Impact factor: 4.497

3.  Medical informatics and bioinformatics: European efforts to facilitate synergy.

Authors:  V Maojo; I Iakovidis; F Martin-Sanchez; J Crespo; C Kulikowski
Journal:  J Biomed Inform       Date:  2001-12       Impact factor: 6.317

4.  Announcing the worldwide Protein Data Bank.

Authors:  Helen Berman; Kim Henrick; Haruki Nakamura
Journal:  Nat Struct Biol       Date:  2003-12

5.  Synergy between medical informatics and bioinformatics: facilitating genomic medicine for future health care.

Authors:  F Martin-Sanchez; I Iakovidis; S Nørager; V Maojo; P de Groen; J Van der Lei; T Jones; K Abraham-Fuchs; R Apweiler; A Babic; R Baud; V Breton; P Cinquin; P Doupi; M Dugas; R Eils; R Engelbrecht; P Ghazal; P Jehenson; C Kulikowski; K Lampe; G De Moor; S Orphanoudakis; N Rossing; B Sarachan; A Sousa; G Spekowius; G Thireos; G Zahlmann; J Zvárová; I Hermosilla; F J Vicente
Journal:  J Biomed Inform       Date:  2004-02       Impact factor: 6.317

Review 6.  Nanoinformatics and DNA-based computing: catalyzing nanomedicine.

Authors:  Victor Maojo; Fernando Martin-Sanchez; Casimir Kulikowski; Alfonso Rodriguez-Paton; Martin Fritts
Journal:  Pediatr Res       Date:  2010-05       Impact factor: 3.756

7.  The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration.

Authors:  Barry Smith; Michael Ashburner; Cornelius Rosse; Jonathan Bard; William Bug; Werner Ceusters; Louis J Goldberg; Karen Eilbeck; Amelia Ireland; Christopher J Mungall; Neocles Leontis; Philippe Rocca-Serra; Alan Ruttenberg; Susanna-Assunta Sansone; Richard H Scheuermann; Nigam Shah; Patricia L Whetzel; Suzanna Lewis
Journal:  Nat Biotechnol       Date:  2007-11       Impact factor: 54.908

Review 8.  Complex mathematical models of biology at the nanoscale.

Authors:  Sharon Bewick; Ruoting Yang; Mingjun Zhang
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2009 Nov-Dec

Review 9.  Bioinformatics in support of molecular medicine.

Authors:  R B Altman
Journal:  Proc AMIA Symp       Date:  1998

10.  GoPubMed: exploring PubMed with the Gene Ontology.

Authors:  Andreas Doms; Michael Schroeder
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

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  6 in total

Review 1.  Convergence of nanotechnology and cancer prevention: are we there yet?

Authors:  David G Menter; Sherri L Patterson; Craig D Logsdon; Scott Kopetz; Anil K Sood; Ernest T Hawk
Journal:  Cancer Prev Res (Phila)       Date:  2014-07-24

2.  Nanoinformatics knowledge infrastructures: bringing efficient information management to nanomedical research.

Authors:  D de la Iglesia; R E Cachau; M García-Remesal; V Maojo
Journal:  Comput Sci Discov       Date:  2013-11-27

3.  A machine learning approach to identify clinical trials involving nanodrugs and nanodevices from ClinicalTrials.gov.

Authors:  Diana de la Iglesia; Miguel García-Remesal; Alberto Anguita; Miguel Muñoz-Mármol; Casimir Kulikowski; Víctor Maojo
Journal:  PLoS One       Date:  2014-10-27       Impact factor: 3.240

Review 4.  Applications of Phyto-Nanotechnology for the Treatment of Neurodegenerative Disorders.

Authors:  Tanima Bhattacharya; Giselle Amanda Borges E Soares; Hitesh Chopra; Md Mominur Rahman; Ziaul Hasan; Shasank S Swain; Simona Cavalu
Journal:  Materials (Basel)       Date:  2022-01-21       Impact factor: 3.623

Review 5.  Medical informatics in croatia - a historical survey.

Authors:  Gjuro Dezelic; Josipa Kern; Mladen Petrovecki; Vesna Ilakovac; Mira Hercigonja-Szekeres
Journal:  Acta Inform Med       Date:  2014-01-25

6.  Bioinformatics in Latin America and SoIBio impact, a tale of spin-off and expansion around genomes and protein structures.

Authors:  Javier De Las Rivas; Cesar Bonavides-Martínez; Francisco Jose Campos-Laborie
Journal:  Brief Bioinform       Date:  2019-03-22       Impact factor: 11.622

  6 in total

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