Literature DB >> 9929182

Bioinformatics in support of molecular medicine.

R B Altman1.   

Abstract

Bioinformatics studies two important information flows in modern biology. The first is the flow of genetic information from the DNA of an individual organism up to the characteristics of a population of such organisms (with an eventual passage of information back to the genetic pool, as encoded within DNA). The second is the flow of experimental information from observed biological phenomena to models that explain them, and then to new experiments in order to test these models. The discipline of bioinformatics has its roots in a number of activities, including the organization of DNA sequence and protein three-dimensional structural data collections in the 1960's and 1970's. It has become a booming academic and industrial enterprise with the introduction of biological experiments that rapidly produce massive amounts of data (such as the multiple genome sequencing projects, the large scale analysis of gene expression, and the large scale analysis of protein-protein interactions). Basic biological science has always had an impact on clinical medicine (and clinical medical information systems), and is creating a new generation of epidemiologic, diagnostic, prognostic, and treatment modalities. Bioinformatics efforts that appear to be wholly geared towards basic science are likely to become relevant to clinical informatics in the coming decade. For example, DNA sequence information and sequence annotations will appear in the medical chart with increasing frequency. The algorithms developed for research in bioinformatics will soon become part of clinical information systems.

Mesh:

Year:  1998        PMID: 9929182      PMCID: PMC2232090     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  32 in total

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Journal:  J Comput Biol       Date:  1995       Impact factor: 1.479

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Journal:  Genomics       Date:  1990-04       Impact factor: 5.736

Review 3.  Novel methods for molecular dynamics simulations.

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Journal:  Curr Opin Struct Biol       Date:  1996-04       Impact factor: 6.809

Review 4.  Mapping the protein universe.

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Journal:  Science       Date:  1996-08-02       Impact factor: 47.728

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6.  The status of online Mendelian inheritance in man (OMIM) medio 1994.

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Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

7.  The International Classification of Diseases: ninth revision (ICD-9)

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Journal:  Ann Intern Med       Date:  1978-03       Impact factor: 25.391

8.  Progress in medical information management. Systematized nomenclature of medicine (SNOMED).

Authors:  R A Côté; S Robboy
Journal:  JAMA       Date:  1980 Feb 22-29       Impact factor: 56.272

9.  How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins.

Authors:  A M Lesk; C Chothia
Journal:  J Mol Biol       Date:  1980-01-25       Impact factor: 5.469

Review 10.  Sculpting proteins interactively: continual energy minimization embedded in a graphical modeling system.

Authors:  M C Surles; J S Richardson; D C Richardson; F P Brooks
Journal:  Protein Sci       Date:  1994-02       Impact factor: 6.725

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  8 in total

1.  Bioinformatics and medical informatics: collaborations on the road to genomic medicine?

Authors:  Victor Maojo; Casimir A Kulikowski
Journal:  J Am Med Inform Assoc       Date:  2003-08-04       Impact factor: 4.497

2.  An evaluation of the current state of genomic data privacy protection technology and a roadmap for the future.

Authors:  Bradley A Malin
Journal:  J Am Med Inform Assoc       Date:  2004-10-18       Impact factor: 4.497

3.  A longitudinal social network analysis of the editorial boards of medical informatics and bioinformatics journals.

Authors:  Bradley Malin; Kathleen Carley
Journal:  J Am Med Inform Assoc       Date:  2007-02-28       Impact factor: 4.497

4.  Training multidisciplinary biomedical informatics students: three years of experience.

Authors:  Erik M van Mulligen; Montserrat Cases; Kristina Hettne; Eva Molero; Marc Weeber; Kevin A Robertson; Baldomero Oliva; Guillermo de la Calle; Victor Maojo
Journal:  J Am Med Inform Assoc       Date:  2007-12-20       Impact factor: 4.497

5.  Re-identification of DNA through an automated linkage process.

Authors:  B Malin; L Sweeney
Journal:  Proc AMIA Symp       Date:  2001

6.  Nanoinformatics: developing new computing applications for nanomedicine.

Authors:  V Maojo; M Fritts; F Martin-Sanchez; D De la Iglesia; R E Cachau; M Garcia-Remesal; J Crespo; J A Mitchell; A Anguita; N Baker; J M Barreiro; S E Benitez; G De la Calle; J C Facelli; P Ghazal; A Geissbuhler; F Gonzalez-Nilo; N Graf; P Grangeat; I Hermosilla; R Hussein; J Kern; S Koch; Y Legre; V Lopez-Alonso; G Lopez-Campos; L Milanesi; V Moustakis; C Munteanu; P Otero; A Pazos; D Perez-Rey; G Potamias; F Sanz; C Kulikowski
Journal:  Comput Sci Eng       Date:  2012-03-07       Impact factor: 2.080

7.  Rise and demise of bioinformatics? Promise and progress.

Authors:  Christos A Ouzounis
Journal:  PLoS Comput Biol       Date:  2012-04-26       Impact factor: 4.475

Review 8.  Transcriptomic Studies of Malaria: a Paradigm for Investigation of Systemic Host-Pathogen Interactions.

Authors:  Hyun Jae Lee; Athina Georgiadou; Thomas D Otto; Michael Levin; Lachlan J Coin; David J Conway; Aubrey J Cunnington
Journal:  Microbiol Mol Biol Rev       Date:  2018-04-25       Impact factor: 11.056

  8 in total

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