Literature DB >> 22935013

Evaluating different fixation protocols for spectral cytopathology, part 2: cultured cells.

Antonella I Mazur1, Ellen J Marcsisin, Benjamin Bird, Miloš Miljković, Max Diem.   

Abstract

Spectral cytopathology (SCP) is a robust and reproducible diagnostic technique that employs infrared spectroscopy and multivariate statistical methods, such as principal component analysis to interrogate unstained cellular samples and discriminate changes on the biochemical level. In the past decade, SCP has taken considerable strides in its application for disease diagnosis. Cultured cell lines have proven to be useful model systems to provide detailed biological information to this field; however, the effects of sample fixation and storage of cultured cells are still not entirely understood in SCP. Conventional cytopathology utilizes fixation and staining methods that have been established and widely accepted for nearly a century and are focused on maintaining the morphology of a cell. Conversely, SCP practices must implement fixation protocols that preserve the sample's biochemical composition and maintain its spectral integrity so not to introduce spectral changes that may mask variance significant to disease. It is not only necessary to evaluate the effects on fixed exfoliated cells but also fixed cultured cells because although they are similar systems, they exhibit distinct differences. We report efforts to study the effects of fixation methodologies commonly used in traditional cytopathology and SCP including both fixed and unfixed routines applied to cultured HeLa cells, an adherent cervical cancer cell line. Data suggest parallel results to findings in Part 1 of this series for exfoliated cells, where the exposure time in fixative and duration of sample storage via desiccation contribute to minor spectral changes only. The results presented here reinforce observations from Part 1 indicating that changes induced by disease are much greater than changes observed as a result of alternate fixation methodologies. Principal component analysis of HeLa cells fixed via the same conditions and protocols as exfoliated cells (Part 1) yield nearly identical results. More importantly, the overall conclusion is that it is necessary that all samples subjected to comparative analysis should be prepared identically because although changes are minute, they are present.

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Year:  2012        PMID: 22935013      PMCID: PMC3463708          DOI: 10.1021/ac3017407

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  17 in total

1.  Infrared methods for monitoring the protonation state of carboxylic amino acids in the photocycle of bacteriorhodopsin.

Authors:  A K Dioumaev
Journal:  Biochemistry (Mosc)       Date:  2001-11       Impact factor: 2.487

2.  Noise adjusted principal component reconstruction to optimize infrared microspectroscopy of individual live cells.

Authors:  Ellen J Marcsisin; Christina M Uttero; Antonella I Mazur; Miloš Miljković; Benjamin Bird; Max Diem
Journal:  Analyst       Date:  2012-03-01       Impact factor: 4.616

3.  Cell-cycle-dependent variations in FTIR micro-spectra of single proliferating HeLa cells: principal component and artificial neural network analysis.

Authors:  Susie Boydston-White; Melissa Romeo; Tatyana Chernenko; Angela Regina; Milos Miljković; Max Diem
Journal:  Biochim Biophys Acta       Date:  2006-05-06

4.  Infrared micro-spectroscopic studies of epithelial cells.

Authors:  Melissa Romeo; Brian Mohlenhoff; Michael Jennings; Max Diem
Journal:  Biochim Biophys Acta       Date:  2006-05-19

5.  Vibrational spectroscopy studies of formalin-fixed cervix tissues.

Authors:  C M Krishna; G D Sockalingum; B M Vadhiraja; K Maheedhar; A C K Rao; L Rao; L Venteo; M Pluot; D J Fernandes; M S Vidyasagar; V B Kartha; M Manfait
Journal:  Biopolymers       Date:  2007-02-15       Impact factor: 2.505

6.  Infrared spectroscopic studies of solvent-induced conformational changes in globular proteins.

Authors:  A L Jacobson; P J Krueger
Journal:  Biochim Biophys Acta       Date:  1975-06-26

Review 7.  Infrared spectroscopy of proteins.

Authors:  Andreas Barth
Journal:  Biochim Biophys Acta       Date:  2007-06-28

8.  Correcting attenuated total reflection-Fourier transform infrared spectra for water vapor and carbon dioxide.

Authors:  Susanne W Bruun; Achim Kohler; Isabelle Adt; Ganesh D Sockalingum; Michel Manfait; Harald Martens
Journal:  Appl Spectrosc       Date:  2006-09       Impact factor: 2.388

9.  Fixation protocols for subcellular imaging by synchrotron-based Fourier transform infrared microspectroscopy.

Authors:  E Gazi; J Dwyer; N P Lockyer; J Miyan; P Gardner; C Hart; M Brown; N W Clarke
Journal:  Biopolymers       Date:  2005-01       Impact factor: 2.505

10.  Impact of fixation on in vitro cell culture lines monitored with Raman spectroscopy.

Authors:  Melissa M Mariani; Peter Lampen; Jürgen Popp; Bayden R Wood; Volker Deckert
Journal:  Analyst       Date:  2009-04-28       Impact factor: 4.616

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  2 in total

1.  Importance of tissue preparation methods in FTIR micro-spectroscopical analysis of biological tissues: 'traps for new users'.

Authors:  Vladislava Zohdi; Donna R Whelan; Bayden R Wood; James T Pearson; Keith R Bambery; M Jane Black
Journal:  PLoS One       Date:  2015-02-24       Impact factor: 3.240

2.  From Mouse to Human: Comparative Analysis between Grey and White Matter by Synchrotron-Fourier Transformed Infrared Microspectroscopy.

Authors:  Paula Sanchez-Molina; Martin Kreuzer; Núria Benseny-Cases; Tony Valente; Beatriz Almolda; Berta González; Bernardo Castellano; Alex Perálvarez-Marín
Journal:  Biomolecules       Date:  2020-07-24
  2 in total

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