Literature DB >> 22928710

Comparative chemogenomics to examine the mechanism of action of dna-targeted platinum-acridine anticancer agents.

Kahlin Cheung-Ong1, Kyung Tae Song, Zhidong Ma, Daniel Shabtai, Anna Y Lee, David Gallo, Lawrence E Heisler, Grant W Brown, Ulrich Bierbach, Guri Giaever, Corey Nislow.   

Abstract

Platinum-based drugs have been used to successfully treat diverse cancers for several decades. Cisplatin, the original compound of this class, cross-links DNA, resulting in cell cycle arrest and cell death via apoptosis. Cisplatin is effective against several tumor types, yet it exhibits toxic side effects and tumors often develop resistance. To mitigate these liabilities while maintaining potency, we generated a library of non-classical platinum-acridine hybrid agents and assessed their mechanisms of action using a validated genome-wide screening approach in Saccharomyces cerevisiae and in the distantly related yeast Schizosaccharomyces pombe. Chemogenomic profiles from both S. cerevisiae and S. pombe demonstrate that several of the platinum-acridines damage DNA differently than cisplatin based on their requirement for distinct modules of DNA repair.

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Year:  2012        PMID: 22928710      PMCID: PMC3500413          DOI: 10.1021/cb300320d

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  36 in total

1.  Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions.

Authors:  Robert P St Onge; Ramamurthy Mani; Julia Oh; Michael Proctor; Eula Fung; Ronald W Davis; Corey Nislow; Frederick P Roth; Guri Giaever
Journal:  Nat Genet       Date:  2007-01-07       Impact factor: 38.330

2.  The chemical genomic portrait of yeast: uncovering a phenotype for all genes.

Authors:  Maureen E Hillenmeyer; Eula Fung; Jan Wildenhain; Sarah E Pierce; Shawn Hoon; William Lee; Michael Proctor; Robert P St Onge; Mike Tyers; Daphne Koller; Russ B Altman; Ronald W Davis; Corey Nislow; Guri Giaever
Journal:  Science       Date:  2008-04-18       Impact factor: 47.728

3.  Design, synthesis, and biological activity of a novel non-cisplatin-type platinum-acridine pharmacophore.

Authors:  E T Martins; H Baruah; J Kramarczyk; G Saluta; C S Day; G L Kucera; U Bierbach
Journal:  J Med Chem       Date:  2001-12-06       Impact factor: 7.446

4.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

5.  Platinum-acridinylthiourea conjugates show cell line-specific cytotoxic enhancement in H460 lung carcinoma cells compared to cisplatin.

Authors:  Suzanne M Hess; Amanda M Mounce; Russel C Sequeira; Todd M Augustus; Margaret C Ackley; Ulrich Bierbach
Journal:  Cancer Chemother Pharmacol       Date:  2005-05-13       Impact factor: 3.333

6.  Bis(acridinylthiourea)platinum(II) complexes: synthesis, DNA affinity, and biological activity in glioblastoma cells.

Authors:  Todd M Augustus; Joel Anderson; Suzanne M Hess; Ulrich Bierbach
Journal:  Bioorg Med Chem Lett       Date:  2003-03-10       Impact factor: 2.823

Review 7.  The yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe: models for cell biology research.

Authors:  Susan L Forsburg
Journal:  Gravit Space Biol Bull       Date:  2005-06

8.  Enrichment map: a network-based method for gene-set enrichment visualization and interpretation.

Authors:  Daniele Merico; Ruth Isserlin; Oliver Stueker; Andrew Emili; Gary D Bader
Journal:  PLoS One       Date:  2010-11-15       Impact factor: 3.240

9.  Unexpected reactivity of the 9-aminoacridine chromophore in guanidylation reactions.

Authors:  Zhidong Ma; Cynthia S Day; Ulrich Bierbach
Journal:  J Org Chem       Date:  2007-06-07       Impact factor: 4.354

10.  Cytoscape 2.8: new features for data integration and network visualization.

Authors:  Michael E Smoot; Keiichiro Ono; Johannes Ruscheinski; Peng-Liang Wang; Trey Ideker
Journal:  Bioinformatics       Date:  2010-12-12       Impact factor: 6.937

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  14 in total

1.  Assembly of Slx4 signaling complexes behind DNA replication forks.

Authors:  Attila Balint; TaeHyung Kim; David Gallo; Jose Renato Cussiol; Francisco M Bastos de Oliveira; Askar Yimit; Jiongwen Ou; Ryuichiro Nakato; Alexey Gurevich; Katsuhiko Shirahige; Marcus B Smolka; Zhaolei Zhang; Grant W Brown
Journal:  EMBO J       Date:  2015-06-25       Impact factor: 11.598

2.  DNA Adduct Detection after Post-Labeling Technique with PCR Amplification (DNA-ADAPT-qPCR) Identifies the Pre-ribosomal RNA Gene as a Direct Target of Platinum-Acridine Anticancer Agents.

Authors:  Xiyuan Yao; Ulrich Bierbach
Journal:  Chemistry       Date:  2021-09-23       Impact factor: 5.020

3.  Using fluorescent post-labeling to probe the subcellular localization of DNA-targeted platinum anticancer agents.

Authors:  Song Ding; Xin Qiao; Jimmy Suryadi; Glen S Marrs; Gregory L Kucera; Ulrich Bierbach
Journal:  Angew Chem Int Ed Engl       Date:  2013-02-20       Impact factor: 15.336

4.  Discovery of a Chiral DNA-Targeted Platinum-Acridine Agent with Potent Enantioselective Anticancer Activity.

Authors:  Shenjie Zhang; Xiyuan Yao; Noah H Watkins; P Keegan Rose; Sofia R Caruso; Cynthia S Day; Ulrich Bierbach
Journal:  Angew Chem Int Ed Engl       Date:  2020-09-29       Impact factor: 15.336

5.  Cellular Recognition and Repair of Monofunctional-Intercalative Platinum--DNA Adducts.

Authors:  Fang Liu; Jimmy Suryadi; Ulrich Bierbach
Journal:  Chem Res Toxicol       Date:  2015-10-16       Impact factor: 3.739

6.  Redesigning the DNA-targeted chromophore in platinum-acridine anticancer agents: a structure-activity relationship study.

Authors:  Amanda J Pickard; Fang Liu; Thomas F Bartenstein; Laura G Haines; Keith E Levine; Gregory L Kucera; Ulrich Bierbach
Journal:  Chemistry       Date:  2014-10-10       Impact factor: 5.236

7.  Design of enzymatically cleavable prodrugs of a potent platinum-containing anticancer agent.

Authors:  Song Ding; Amanda J Pickard; Gregory L Kucera; Ulrich Bierbach
Journal:  Chemistry       Date:  2014-10-10       Impact factor: 5.236

8.  Ruthenium dihydroxybipyridine complexes are tumor activated prodrugs due to low pH and blue light induced ligand release.

Authors:  Kyle T Hufziger; Fathima Shazna Thowfeik; David J Charboneau; Ismael Nieto; William G Dougherty; W Scott Kassel; Timothy J Dudley; Edward J Merino; Elizabeth T Papish; Jared J Paul
Journal:  J Inorg Biochem       Date:  2013-10-14       Impact factor: 4.155

Review 9.  Transition Metal Intercalators as Anticancer Agents-Recent Advances.

Authors:  Krishant M Deo; Benjamin J Pages; Dale L Ang; Christopher P Gordon; Janice R Aldrich-Wright
Journal:  Int J Mol Sci       Date:  2016-10-31       Impact factor: 5.923

10.  An algorithm for chemical genomic profiling that minimizes batch effects: bucket evaluations.

Authors:  Daniel Shabtai; Guri Giaever; Corey Nislow
Journal:  BMC Bioinformatics       Date:  2012-09-25       Impact factor: 3.169

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