Literature DB >> 22921005

Mini-review: what nuclear magnetic resonance can tell us about protective tissues.

Olga Serra1, Subhasish Chatterjee, Wenlin Huang, Ruth E Stark.   

Abstract

The epidermis and periderm protect plants from water and solute loss, pathogen invasion, and UV radiation. The cell walls of these protective tissues deposit the insoluble lipid biopolyesters cutin and suberin, respectively. These biopolymers interact in turn with polysaccharides, waxes and aromatic compounds to create complex assemblies that are not yet well defined at the molecular level. Non-destructive approaches must be tailored to the insoluble and noncrystalline character of these assemblies to establish the polymer and inter-component interactions needed to create functional barriers and structural supports. In the present mini-review, we illustrate the contribution of solid-state NMR methodology to compare the architecture of intact fruit cuticular polymers in wild-type and single-gene mutant tomatoes. We also show the potential of NMR-based metabolomics to identify the soluble metabolites that contribute to barrier formation in different varieties of potato tubers. Finally, we outline the challenges of these spectroscopic approaches, which include limited spectral resolution in solid state, differential swelling capabilities in solution, and incomplete dissolution in ionic liquids. Given the many genetically modified plants with altered suberin and cutin polymers that are now available, NMR nonetheless offers a promising tool to gain molecular insight into the complexity of these protective materials.
Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

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Year:  2012        PMID: 22921005      PMCID: PMC3428714          DOI: 10.1016/j.plantsci.2012.06.013

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  48 in total

Review 1.  Biophysical and biochemical characteristics of cutin, a plant barrier biopolymer.

Authors:  Antonio Heredia
Journal:  Biochim Biophys Acta       Date:  2003-03-17

Review 2.  NMR-based plant metabolomics: where do we stand, where do we go?

Authors:  Hye Kyong Kim; Young Hae Choi; Robert Verpoorte
Journal:  Trends Biotechnol       Date:  2011-03-23       Impact factor: 19.536

3.  Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation.

Authors:  Antonio J Matas; Trevor H Yeats; Gregory J Buda; Yi Zheng; Subhasish Chatterjee; Takayuki Tohge; Lalit Ponnala; Avital Adato; Asaph Aharoni; Ruth Stark; Alisdair R Fernie; Zhangjun Fei; James J Giovannoni; Jocelyn K C Rose
Journal:  Plant Cell       Date:  2011-11-01       Impact factor: 11.277

4.  Biosynthesis, molecular structure, and domain architecture of potato suberin: a (13)C NMR study using isotopically labeled precursors.

Authors:  B Yan; R E Stark
Journal:  J Agric Food Chem       Date:  2000-08       Impact factor: 5.279

5.  NMR studies of molecular structure in fruit cuticle polyesters.

Authors:  X Fang; F Qiu; B Yan; H Wang; A J Mort; R E Stark
Journal:  Phytochemistry       Date:  2001-07       Impact factor: 4.072

6.  Cutin deficiency in the tomato fruit cuticle consistently affects resistance to microbial infection and biomechanical properties, but not transpirational water loss.

Authors:  Tal Isaacson; Dylan K Kosma; Antonio J Matas; Gregory J Buda; Yonghua He; Bingwu Yu; Arika Pravitasari; James D Batteas; Ruth E Stark; Matthew A Jenks; Jocelyn K C Rose
Journal:  Plant J       Date:  2009-07-06       Impact factor: 6.417

7.  Structure of the polyphenolic component of suberin isolated from potato (Solanum tuberosum var. Nikola).

Authors:  Maija-Liisa Mattinen; Ilari Filpponen; Riikka Järvinen; Bin Li; Heikki Kallio; Pekka Lehtinen; Dimitris Argyropoulos
Journal:  J Agric Food Chem       Date:  2009-10-28       Impact factor: 5.279

8.  CYP86A33-targeted gene silencing in potato tuber alters suberin composition, distorts suberin lamellae, and impairs the periderm's water barrier function.

Authors:  Olga Serra; Marçal Soler; Carolin Hohn; Vincent Sauveplane; Franck Pinot; Rochus Franke; Lukas Schreiber; Salomé Prat; Marisa Molinas; Mercè Figueras
Journal:  Plant Physiol       Date:  2008-12-24       Impact factor: 8.340

9.  The developmental pattern of tomato fruit wax accumulation and its impact on cuticular transpiration barrier properties: effects of a deficiency in a beta-ketoacyl-coenzyme A synthase (LeCER6).

Authors:  Jana Leide; Ulrich Hildebrandt; Kerstin Reussing; Markus Riederer; Gerd Vogg
Journal:  Plant Physiol       Date:  2007-04-27       Impact factor: 8.340

10.  Isolation and biophysical study of fruit cuticles.

Authors:  Subhasish Chatterjee; Sayantani Sarkar; Julia Oktawiec; Zhantong Mao; Olivia Niitsoo; Ruth E Stark
Journal:  J Vis Exp       Date:  2012-03-30       Impact factor: 1.355

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  10 in total

1.  Protein structure networks provide insight into active site flexibility in esterase/lipases from the carnivorous plant Drosera capensis.

Authors:  Vy T Duong; Megha H Unhelkar; John E Kelly; Suhn H Kim; Carter T Butts; Rachel W Martin
Journal:  Integr Biol (Camb)       Date:  2018-12-19       Impact factor: 2.192

Review 2.  The formation and function of plant cuticles.

Authors:  Trevor H Yeats; Jocelyn K C Rose
Journal:  Plant Physiol       Date:  2013-07-26       Impact factor: 8.340

3.  Solid-State (13)C NMR Delineates the Architectural Design of Biopolymers in Native and Genetically Altered Tomato Fruit Cuticles.

Authors:  Subhasish Chatterjee; Antonio J Matas; Tal Isaacson; Cindie Kehlet; Jocelyn K C Rose; Ruth E Stark
Journal:  Biomacromolecules       Date:  2015-12-24       Impact factor: 6.988

Review 4.  The magic angle view to food: magic-angle spinning (MAS) NMR spectroscopy in food science.

Authors:  Henrik Max Jensen; Hanne Christine Bertram
Journal:  Metabolomics       Date:  2019-03-13       Impact factor: 4.290

Review 5.  Role of HXXXD-motif/BAHD acyltransferases in the biosynthesis of extracellular lipids.

Authors:  Isabel Molina; Dylan Kosma
Journal:  Plant Cell Rep       Date:  2014-12-16       Impact factor: 4.570

6.  Acyl-lipid metabolism.

Authors:  Yonghua Li-Beisson; Basil Shorrosh; Fred Beisson; Mats X Andersson; Vincent Arondel; Philip D Bates; Sébastien Baud; David Bird; Allan Debono; Timothy P Durrett; Rochus B Franke; Ian A Graham; Kenta Katayama; Amélie A Kelly; Tony Larson; Jonathan E Markham; Martine Miquel; Isabel Molina; Ikuo Nishida; Owen Rowland; Lacey Samuels; Katherine M Schmid; Hajime Wada; Ruth Welti; Changcheng Xu; Rémi Zallot; John Ohlrogge
Journal:  Arabidopsis Book       Date:  2013-01-29

Review 7.  Tailoring NMR experiments for structural characterization of amorphous biological solids: A practical guide.

Authors:  John E Kelly; Christine Chrissian; Ruth E Stark
Journal:  Solid State Nucl Magn Reson       Date:  2020-08-27       Impact factor: 2.293

8.  Deconstructing a plant macromolecular assembly: chemical architecture, molecular flexibility, and mechanical performance of natural and engineered potato suberins.

Authors:  Olga Serra; Subhasish Chatterjee; Mercè Figueras; Marisa Molinas; Ruth E Stark
Journal:  Biomacromolecules       Date:  2014-02-25       Impact factor: 6.988

Review 9.  Importance of suberin biopolymer in plant function, contributions to soil organic carbon and in the production of bio-derived energy and materials.

Authors:  Anne E Harman-Ware; Samuel Sparks; Bennett Addison; Udaya C Kalluri
Journal:  Biotechnol Biofuels       Date:  2021-03-20       Impact factor: 6.040

Review 10.  Infrared and Raman spectroscopic features of plant cuticles: a review.

Authors:  José A Heredia-Guerrero; José J Benítez; Eva Domínguez; Ilker S Bayer; Roberto Cingolani; Athanassia Athanassiou; Antonio Heredia
Journal:  Front Plant Sci       Date:  2014-06-25       Impact factor: 5.753

  10 in total

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