Literature DB >> 22913516

Structural determination of the phosphorylation domain of the ryanodine receptor.

Parveen Sharma1, Noboru Ishiyama, Usha Nair, Wenping Li, Aiping Dong, Tetsuaki Miyake, Aaron Wilson, Tim Ryan, David H MacLennan, Thomas Kislinger, Mitsuhiko Ikura, Sirano Dhe-Paganon, Anthony O Gramolini.   

Abstract

The ryanodine receptor (RyR) is a large, homotetrameric sarcoplasmic reticulum membrane protein that is essential for Ca(2+) cycling in both skeletal and cardiac muscle. Genetic mutations in RyR1 are associated with severe conditions including malignant hyperthermia (MH) and central core disease. One phosphorylation site (Ser 2843) has been identified in a segment of RyR1 flanked by two RyR motifs, which are found exclusively in all RyR isoforms as closely associated tandem (or paired) motifs, and are named after the protein itself. These motifs also contain six known MH mutations. In this study, we designed, expressed and purified the tandem RyR motifs, and show that this domain contains a putative binding site for the Ca(2+)/calmodulin-dependent protein kinase β isoform. We present a 2.2 Å resolution crystal structure of the RyR domain revealing a two-fold, symmetric, extended four-helix bundle stabilized by a β sheet. Using mathematical modelling, we fit our crystal structure within a tetrameric electron microscopy (EM) structure of native RyR1, and propose that this domain is localized in the RyR clamp region, which is absent in its cousin protein inositol 1,4,5-trisphosphate receptor.
© 2012 The Authors Journal compilation © 2012 FEBS.

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Year:  2012        PMID: 22913516      PMCID: PMC3712973          DOI: 10.1111/j.1742-4658.2012.08755.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  53 in total

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Review 2.  Cellular basis of triggered arrhythmias in heart failure.

Authors:  Steven M Pogwizd; Donald M Bers
Journal:  Trends Cardiovasc Med       Date:  2004-02       Impact factor: 6.677

3.  Internal structure and visualization of transmembrane domains of the RyR1 calcium release channel by cryo-EM.

Authors:  Montserrat Samsó; Terence Wagenknecht; P D Allen
Journal:  Nat Struct Mol Biol       Date:  2005-05-22       Impact factor: 15.369

4.  Ryanodine receptor phosphorylation by calcium/calmodulin-dependent protein kinase II promotes life-threatening ventricular arrhythmias in mice with heart failure.

Authors:  Ralph J van Oort; Mark D McCauley; Sayali S Dixit; Laetitia Pereira; Yi Yang; Jonathan L Respress; Qiongling Wang; Angela C De Almeida; Darlene G Skapura; Mark E Anderson; Donald M Bers; Xander H T Wehrens
Journal:  Circulation       Date:  2010-11-15       Impact factor: 29.690

5.  Malignant hyperthermia in Japan: mutation screening of the entire ryanodine receptor type 1 gene coding region by direct sequencing.

Authors:  Carlos A Ibarra M; Shiwen Wu; Kumiko Murayama; Narihiro Minami; Yasuko Ichihara; Hirosato Kikuchi; Satoru Noguchi; Yukiko K Hayashi; Ryoichi Ochiai; Ichizo Nishino
Journal:  Anesthesiology       Date:  2006-06       Impact factor: 7.892

6.  Purified ryanodine receptor from skeletal muscle sarcoplasmic reticulum is the Ca2+-permeable pore of the calcium release channel.

Authors:  T Imagawa; J S Smith; R Coronado; K P Campbell
Journal:  J Biol Chem       Date:  1987-12-05       Impact factor: 5.157

7.  Specific association of calmodulin-dependent protein kinase and related substrates with the junctional sarcoplasmic reticulum of skeletal muscle.

Authors:  A Chu; C Sumbilla; G Inesi; S D Jay; K P Campbell
Journal:  Biochemistry       Date:  1990-06-26       Impact factor: 3.162

8.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

9.  Molecular cloning of cDNA encoding human and rabbit forms of the Ca2+ release channel (ryanodine receptor) of skeletal muscle sarcoplasmic reticulum.

Authors:  F Zorzato; J Fujii; K Otsu; M Phillips; N M Green; F A Lai; G Meissner; D H MacLennan
Journal:  J Biol Chem       Date:  1990-02-05       Impact factor: 5.157

10.  Ca2+ signaling in HEK-293 and skeletal muscle cells expressing recombinant ryanodine receptors harboring malignant hyperthermia and central core disease mutations.

Authors:  Marisa Brini; Sabrina Manni; Nicola Pierobon; Guo Guang Du; Parveen Sharma; David H MacLennan; Ernesto Carafoli
Journal:  J Biol Chem       Date:  2005-02-02       Impact factor: 5.157

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  21 in total

1.  Architecture and conformational switch mechanism of the ryanodine receptor.

Authors:  Rouslan G Efremov; Alexander Leitner; Ruedi Aebersold; Stefan Raunser
Journal:  Nature       Date:  2014-12-01       Impact factor: 49.962

Review 2.  Ca2+ Release Channels Join the 'Resolution Revolution'.

Authors:  Ran Zalk; Andrew R Marks
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Review 3.  Muscle glycogen stores and fatigue.

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Review 4.  Ryanodine Receptor Structure and Function in Health and Disease.

Authors:  Gaetano Santulli; Daniel Lewis; Amedee des Georges; Andrew R Marks; Joachim Frank
Journal:  Subcell Biochem       Date:  2018

5.  Structural Basis for Gating and Activation of RyR1.

Authors:  Amédée des Georges; Oliver B Clarke; Ran Zalk; Qi Yuan; Kendall J Condon; Robert A Grassucci; Wayne A Hendrickson; Andrew R Marks; Joachim Frank
Journal:  Cell       Date:  2016-09-22       Impact factor: 41.582

6.  Modeling a ryanodine receptor N-terminal domain connecting the central vestibule and the corner clamp region.

Authors:  Li Zhu; Xiaowei Zhong; S R Wayne Chen; Nilesh Banavali; Zheng Liu
Journal:  J Biol Chem       Date:  2012-11-30       Impact factor: 5.157

7.  Two potential calmodulin-binding sequences in the ryanodine receptor contribute to a mobile, intra-subunit calmodulin-binding domain.

Authors:  Xiaojun Huang; Ying Liu; Ruiwu Wang; Xiaowei Zhong; Yingjie Liu; Andrea Koop; S R Wayne Chen; Terence Wagenknecht; Zheng Liu
Journal:  J Cell Sci       Date:  2013-07-18       Impact factor: 5.285

Review 8.  Structures of the colossal RyR1 calcium release channel.

Authors:  Oliver B Clarke; Wayne A Hendrickson
Journal:  Curr Opin Struct Biol       Date:  2016-09-27       Impact factor: 6.809

9.  Conformational dynamics inside amino-terminal disease hotspot of ryanodine receptor.

Authors:  Xiaowei Zhong; Ying Liu; Li Zhu; Xing Meng; Ruiwu Wang; Filip Van Petegem; Terence Wagenknecht; S R Wayne Chen; Zheng Liu
Journal:  Structure       Date:  2013-10-17       Impact factor: 5.006

10.  CaMKII-dependent phosphorylation of RyR2 promotes targetable pathological RyR2 conformational shift.

Authors:  Hitoshi Uchinoumi; Yi Yang; Tetsuro Oda; Na Li; Katherina M Alsina; Jose L Puglisi; Ye Chen-Izu; Razvan L Cornea; Xander H T Wehrens; Donald M Bers
Journal:  J Mol Cell Cardiol       Date:  2016-06-16       Impact factor: 5.000

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