Literature DB >> 22911467

High-resolution 3D HNCOCA experiment applied to a 28 kDa paramagnetic protein.

B Brutscher1, F Cordier, J P Simorre, M Caffrey, D Marion.   

Abstract

A new triple-resonance 3D HNCOCA pulse scheme is presented, designed to identify the backbone nuclei (H(N), N, CO, C(α)) of doubly labelled proteins. The two carbon frequencies are labelled along the same indirect dimension and the corresponding dwell times can be independently scaled in order to account for the relaxation properties and chemical shift ranges of the CO and C(α). If one takes advantage of the symmetry properties of the spectra in the course of the peak picking, this 3D scheme has the same sensitivity as the 4D experiment, but with an improved resolution. The sequence is illustrated on a 0.5 mM sample of Rhodobacter capsulatus cytochrome c' a homodimeric paramagnetic protein of 2×14 kDa. A resonance assignment strategy, based on a low-concentration (13)C/(15)N-labelled sample and a more concentrated (15)N-labelled sample, is proposed for proteins where the expression system shows a limited efficiency.

Entities:  

Year:  1995        PMID: 22911467     DOI: 10.1007/BF00208811

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  5 in total

1.  Computer assignment of the backbone resonances of labelled proteins using two-dimensional correlation experiments.

Authors:  N Morelle; B Brutscher; J P Simorre; D Marion
Journal:  J Biomol NMR       Date:  1995-02       Impact factor: 2.835

2.  Assignment of the 13C and 13CO resonances for Rhodobacter capsulatus ferrocytochrome c2 using double-resonance and triple-resonance NMR spectroscopy.

Authors:  M Caffrey; B Brutscher; J P Simorre; J Fitch; M Cusanovich; D Marion
Journal:  Eur J Biochem       Date:  1994-04-01

3.  Assignment of NMR spectra of proteins using triple-resonance two-dimensional experiments.

Authors:  J P Simorre; B Brutscher; M S Caffrey; D Marion
Journal:  J Biomol NMR       Date:  1994-05       Impact factor: 2.835

4.  3D 13C-15N-heteronuclear two-spin coherence spectroscopy for polypeptide backbone assignments in 13C-15N-double-labeled proteins.

Authors:  T Szyperski; G Wider; J H Bushweller; K Wüthrich
Journal:  J Biomol NMR       Date:  1993-01       Impact factor: 2.835

5.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

  5 in total
  16 in total

Review 1.  Radial sampling for fast NMR: Concepts and practices over three decades.

Authors:  Brian E Coggins; Ronald A Venters; Pei Zhou
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-07-30       Impact factor: 9.795

2.  Multiple quadrature detection in reduced dimensionality experiments.

Authors:  Wiktor Koźmiński; Igor Zhukov
Journal:  J Biomol NMR       Date:  2003-06       Impact factor: 2.835

3.  GFT NMR experiments for polypeptide backbone and 13Cbeta chemical shift assignment.

Authors:  Seho Kim; Thomas Szyperski
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

4.  (3,2)D GFT-NMR experiments for fast data collection from proteins.

Authors:  Youlin Xia; Guang Zhu; Sudha Veeraraghavan; Xiaolian Gao
Journal:  J Biomol NMR       Date:  2004-08       Impact factor: 2.835

5.  Combined frequency- and time-domain NMR spectroscopy. Application to fast protein resonance assignment.

Authors:  Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2004-05       Impact factor: 2.835

6.  PR-CALC: a program for the reconstruction of NMR spectra from projections.

Authors:  Brian E Coggins; Pei Zhou
Journal:  J Biomol NMR       Date:  2006-03       Impact factor: 2.835

7.  Covariance NMR in higher dimensions: application to 4D NOESY spectroscopy of proteins.

Authors:  David A Snyder; Fengli Zhang; Rafael Brüschweiler
Journal:  J Biomol NMR       Date:  2007-09-18       Impact factor: 2.835

8.  A reduced dimensionality NMR pulse sequence and an efficient protocol for unambiguous assignment in intrinsically disordered proteins.

Authors:  Jithender G Reddy; Ramakrishna V Hosur
Journal:  J Biomol NMR       Date:  2014-05-23       Impact factor: 2.835

9.  Clean absorption mode NMR data acquisition based on time-proportional phase incrementation.

Authors:  Yibing Wu; Arindam Ghosh; Thomas Szyperski
Journal:  J Struct Funct Genomics       Date:  2009-06-05

10.  Novel projected 4D triple resonance experiments for polypeptide backbone chemical shift assignment.

Authors:  Youlin Xia; Cheryl H Arrowsmith; Thomas Szyperski
Journal:  J Biomol NMR       Date:  2002-09       Impact factor: 2.835

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