Literature DB >> 1337001

Sequential assignment of the backbone nuclei (1H, 15N and 13C) of c-H-ras p21 (1-166).GDP using a novel 4D NMR strategy.

S L Campbell-Burk1, P J Domaille, M A Starovasnik, W Boucher, E D Laue.   

Abstract

The c-H-ras p21 protein is the product of the human ras proto-oncogene, a member of a ubiquitous eukaryotic gene family which is highly conserved in evolution. These proteins play an important role in the control of cellular growth. We report here the sequential assignment of the backbone nuclei in a truncated form of the 21-kD gene product, using our recently proposed 4D NMR strategy (Boucher et al., 1992). These assignments are the first step towards a full investigation of the structure, dynamics and interactions of wild-type and oncogenic ras p21 using NMR spectroscopy. Some of the data were presented at the 33rd ENC held at Asilomar, California, U.S.A., in April 1992.

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Year:  1992        PMID: 1337001     DOI: 10.1007/bf02192852

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  26 in total

1.  Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins.

Authors:  M V Milburn; L Tong; A M deVos; A Brünger; Z Yamaizumi; S Nishimura; S H Kim
Journal:  Science       Date:  1990-02-23       Impact factor: 47.728

2.  Three-dimensional structure of an oncogene protein: catalytic domain of human c-H-ras p21.

Authors:  A M de Vos; L Tong; M V Milburn; P M Matias; J Jancarik; S Noguchi; S Nishimura; K Miura; E Ohtsuka; S H Kim
Journal:  Science       Date:  1988-02-19       Impact factor: 47.728

Review 3.  ras genes.

Authors:  M Barbacid
Journal:  Annu Rev Biochem       Date:  1987       Impact factor: 23.643

4.  Proton NMR studies of transforming and nontransforming H-ras p21 mutants.

Authors:  I Schlichting; J John; M Frech; P Chardin; A Wittinghofer; H Zimmermann; P Rösch
Journal:  Biochemistry       Date:  1990-01-16       Impact factor: 3.162

5.  Overcoming the overlap problem in the assignment of 1H NMR spectra of larger proteins by use of three-dimensional heteronuclear 1H-15N Hartmann-Hahn-multiple quantum coherence and nuclear Overhauser-multiple quantum coherence spectroscopy: application to interleukin 1 beta.

Authors:  D Marion; P C Driscoll; L E Kay; P T Wingfield; A Bax; A M Gronenborn; G M Clore
Journal:  Biochemistry       Date:  1989-07-25       Impact factor: 3.162

6.  X-ray crystal structures of transforming p21 ras mutants suggest a transition-state stabilization mechanism for GTP hydrolysis.

Authors:  G G Privé; M V Milburn; L Tong; A M de Vos; Z Yamaizumi; S Nishimura; S H Kim
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-15       Impact factor: 11.205

7.  Conformation change of effector-region residues in antiparallel beta-sheet of human c-Ha-ras protein on GDP----GTP gamma S exchange: a two-dimensional NMR study.

Authors:  K Yamasaki; G Kawai; Y Ito; Y Muto; J Fujita; T Miyazawa; S Nishimura; S Yokoyama
Journal:  Biochem Biophys Res Commun       Date:  1989-08-15       Impact factor: 3.575

8.  Structural and dynamic differences between normal and transforming N-ras gene products: a 31P and isotope-edited 1H NMR study.

Authors:  S Campbell-Burk
Journal:  Biochemistry       Date:  1989-11-28       Impact factor: 3.162

9.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

10.  Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.35 A resolution: implications for the mechanism of GTP hydrolysis.

Authors:  E F Pai; U Krengel; G A Petsko; R S Goody; W Kabsch; A Wittinghofer
Journal:  EMBO J       Date:  1990-08       Impact factor: 11.598

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  8 in total

1.  RefDB: a database of uniformly referenced protein chemical shifts.

Authors:  Haiyan Zhang; Stephen Neal; David S Wishart
Journal:  J Biomol NMR       Date:  2003-03       Impact factor: 2.835

2.  NMR View: A computer program for the visualization and analysis of NMR data.

Authors:  B A Johnson; R A Blevins
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

3.  Evaluation of an algorithm for the automated sequential assignment of protein backbone resonances: a demonstration of the connectivity tracing assignment tools (CONTRAST) software package.

Authors:  J B Olson; J L Markley
Journal:  J Biomol NMR       Date:  1994-05       Impact factor: 2.835

4.  The effect of 17O on the relaxation of an amide proton within a hydrogen bond.

Authors:  C J Halkides; A G Redfield
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

5.  The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data.

Authors:  D S Wishart; B D Sykes
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

6.  An automated procedure for the assignment of protein 1HN, 15N, 13C alpha, 1H alpha, 13C beta and 1H beta resonances.

Authors:  M S Friedrichs; L Mueller; M Wittekind
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

7.  A nomenclature and data model to describe NMR experiments.

Authors:  Rasmus H Fogh; Wim F Vranken; Wayne Boucher; Tim J Stevens; Ernest D Laue
Journal:  J Biomol NMR       Date:  2006-09-22       Impact factor: 2.835

8.  Site-specific monoubiquitination activates Ras by impeding GTPase-activating protein function.

Authors:  Rachael Baker; Steven M Lewis; Atsuo T Sasaki; Emily M Wilkerson; Jason W Locasale; Lewis C Cantley; Brian Kuhlman; Henrik G Dohlman; Sharon L Campbell
Journal:  Nat Struct Mol Biol       Date:  2012-11-25       Impact factor: 15.369

  8 in total

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