Literature DB >> 22911006

Three-dimensional (1)H-TOCSY-relayed ct-[(13)C, (1)H]-HMQC for aromatic spin system identification in uniformly (13)C-labeled proteins.

O Zerbe1, T Szyperski, M Ottiger, K Wüthrich.   

Abstract

Three-dimensional (1)H-TOCSY-relayed ct-[(13)C,(1)H]-HMQC is a novel experiment for aromatic spin system identification in uniformly (13)C-labeled proteins, which is implemented so that it correlates the chemical shift of a given aromatic proton with those of the directly attached carbon and all vicinal protons. The ct-HMQC scheme is used both for overlay of the indirect (1)H and (13)C chemical shift evolution periods and for the generation of (1)H-(1)H antiphase magnetization to accelerate the (1)H-TOCSY magnetization transfer at short mixing times. As an illustration, data recorded for the 18 kDa protein cyclophilin A are presented. Since transverse relaxation of (13)C-(1)H zero-quantum and double-quantum coherences is to first order insensitive to (13)C-(1)H heteronuclear dipolar relaxation, the new experiment should work also for proteins with molecular weights above 20 kDa.

Entities:  

Year:  1996        PMID: 22911006     DOI: 10.1007/BF00203820

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  10 in total

Review 1.  Heteronuclear filters in two-dimensional [1H,1H]-NMR spectroscopy: combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions.

Authors:  G Otting; K Wüthrich
Journal:  Q Rev Biophys       Date:  1990-02       Impact factor: 5.318

Review 2.  Proton-detected heteronuclear edited and correlated nuclear magnetic resonance and nuclear Overhauser effect in solution.

Authors:  R H Griffey; A G Redfield
Journal:  Q Rev Biophys       Date:  1987-02       Impact factor: 5.318

3.  Solution structure of a low molecular weight protein tyrosine phosphatase.

Authors:  T M Logan; M M Zhou; D G Nettesheim; R P Meadows; R L Van Etten; S W Fesik
Journal:  Biochemistry       Date:  1994-09-20       Impact factor: 3.162

4.  Improved three-dimensional 1H-13C-1H correlation spectroscopy of a 13C-labeled protein using constant-time evolution.

Authors:  M Ikura; L E Kay; A Bax
Journal:  J Biomol NMR       Date:  1991-09       Impact factor: 2.835

5.  Secondary structure and topology of Acanthamoeba profilin I as determined by heteronuclear nuclear magnetic resonance spectroscopy.

Authors:  S J Archer; V K Vinson; T D Pollard; D A Torchia
Journal:  Biochemistry       Date:  1993-07-06       Impact factor: 3.162

6.  NMR structure determination of the Escherichia coli DnaJ molecular chaperone: secondary structure and backbone fold of the N-terminal region (residues 2-108) containing the highly conserved J domain.

Authors:  T Szyperski; M Pellecchia; D Wall; C Georgopoulos; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

7.  Spin-locked multiple quantum coherence for signal enhancement in heteronuclear multidimensional NMR experiments.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Solution structure of the DNA-binding domain of the heat shock transcription factor determined by multidimensional heteronuclear magnetic resonance spectroscopy.

Authors:  F F Damberger; J G Pelton; C J Harrison; H C Nelson; D E Wemmer
Journal:  Protein Sci       Date:  1994-10       Impact factor: 6.725

9.  3D 13C-15N-heteronuclear two-spin coherence spectroscopy for polypeptide backbone assignments in 13C-15N-double-labeled proteins.

Authors:  T Szyperski; G Wider; J H Bushweller; K Wüthrich
Journal:  J Biomol NMR       Date:  1993-01       Impact factor: 2.835

10.  Determination of the NMR solution structure of the cyclophilin A-cyclosporin A complex.

Authors:  C Spitzfaden; W Braun; G Wider; H Widmer; K Wüthrich
Journal:  J Biomol NMR       Date:  1994-07       Impact factor: 2.835

  10 in total
  16 in total

1.  NMR assignment of the A form of the pheromone-binding protein of Bombyx mori.

Authors:  R Horst; F Damberger; G Peng; L Nikonova; W S Leal; K Wüthrich
Journal:  J Biomol NMR       Date:  2001-01       Impact factor: 2.835

2.  The NMR structure of the class I human ubiquitin-conjugating enzyme 2b.

Authors:  Takaaki Miura; Werner Klaus; Alfred Ross; Peter Güntert; Hans Senn
Journal:  J Biomol NMR       Date:  2002-01       Impact factor: 2.835

3.  Solution structure and stability of the anti-sigma factor AsiA: implications for novel functions.

Authors:  Jeffrey L Urbauer; Mario F Simeonov; Ramona J Bieber Urbauer; Karen Adelman; Joshua M Gilmore; Edward N Brody
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-05       Impact factor: 11.205

4.  Reduced-dimensionality NMR spectroscopy for high-throughput protein resonance assignment.

Authors:  Thomas Szyperski; Deok C Yeh; Dinesh K Sukumaran; Hunter N B Moseley; Gaetano T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

5.  4D APSY-HBCB(CG)CDHD experiment for automated assignment of aromatic amino acid side chains in proteins.

Authors:  Barbara Krähenbühl; Sebastian Hiller; Gerhard Wider
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

6.  Sequence-specific 1H, 13C and 15N assignment of the TMP-resistant dihydrofolate reductase mutant DHFR(F98Y) in the ternary complex with TMP and NADPH.

Authors:  S Altmann; A M Labhardt; H Senn; K Wüthrich
Journal:  J Biomol NMR       Date:  1997-06       Impact factor: 2.835

7.  (1)H, (15)N and (13)C resonance assignment of human gammaS-crystallin, a 21 kDa eye-lens protein.

Authors:  Carine Baraguey; Fériel Skouri-Panet; François Bontems; Annette Tardieu; Gérard Chassaing; Olivier Lequin
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

8.  NMR structure of a KlbA intein precursor from Methanococcus jannaschii.

Authors:  Margaret A Johnson; Maurice W Southworth; Torsten Herrmann; Lear Brace; Francine B Perler; Kurt Wüthrich
Journal:  Protein Sci       Date:  2007-07       Impact factor: 6.725

9.  Complete heteronuclear NMR resonance assignments and secondary structure of core binding factor beta (1-141).

Authors:  X Huang; N A Speck; J H Bushweller
Journal:  J Biomol NMR       Date:  1998-10       Impact factor: 2.835

10.  Solution structure and properties of AlgH from Pseudomonas aeruginosa.

Authors:  Jeffrey L Urbauer; Aaron B Cowley; Hayley P Broussard; Henry T Niedermaier; Ramona J Bieber Urbauer
Journal:  Proteins       Date:  2015-04-29
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