Literature DB >> 22910849

AURELIA, a program for computer-aided analysis of multidimensional NMR spectra.

K P Neidig1, M Geyer, A Görler, C Antz, R Saffrich, W Beneicke, H R Kalbitzer.   

Abstract

AURELIA is an advanced program for the computer-aided evaluation of two-, three- and four-dimensional NMR spectra of any type of molecule. It can be used for the analysis of spectra of small molecules as well as for evaluation of complicated spectra of biological macromolecules such as proteins. AURELIA is highly interactive and offers a large number of tools, such as artefact reduction, cluster and multiplet analysis, spin system searches, resonance assignments, automated calculation of volumes in multidimensional spectra, calculation of distances with different approaches, including the full relaxation matrix approach, Bayesian analysis of peak features, correlation of molecular structures with NMR data, comparison of spectra via spectral algebra and pattern match techniques, automated sequential assignments on the basis of triple resonance spectra, and automatic strip calculation. In contrast to most other programs, many tasks are performed automatically.

Entities:  

Year:  1995        PMID: 22910849     DOI: 10.1007/BF00197807

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  29 in total

1.  Efficient analysis of protein 2D NMR spectra using the software package EASY.

Authors:  C Eccles; P Güntert; M Billeter; K Wüthrich
Journal:  J Biomol NMR       Date:  1991-07       Impact factor: 2.835

2.  Computer-aided assignment of the 1H-NMR spectrum of the viral-protein-genome-linked polypeptide from cowpea mosaic virus.

Authors:  F J van de Ven; P O Lycksell; A van Kammen; C W Hilbers
Journal:  Eur J Biochem       Date:  1990-07-05

3.  A computer-based protocol for semiautomated assignments and 3D structure determination of proteins.

Authors:  R P Meadows; E T Olejniczak; S W Fesik
Journal:  J Biomol NMR       Date:  1994-01       Impact factor: 2.835

4.  Bayesian signal extraction from noisy FT NMR spectra.

Authors:  A Rouh; A Louis-Joseph; J Y Lallemand
Journal:  J Biomol NMR       Date:  1994-07       Impact factor: 2.835

5.  Automated and semiautomated analysis of homo- and heteronuclear multidimensional nuclear magnetic resonance spectra of proteins: the program Pronto.

Authors:  M Kjaer; K V Andersen; F M Poulsen
Journal:  Methods Enzymol       Date:  1994       Impact factor: 1.600

6.  Sequential assignment of 2D-NMR spectra of proteins using genetic algorithms.

Authors:  R Wehrens; C Lucasius; L Buydens; G Kateman
Journal:  J Chem Inf Comput Sci       Date:  1993 Mar-Apr

7.  Automated sequencing of amino acid spin systems in proteins using multidimensional HCC(CO)NH-TOCSY spectroscopy and constraint propagation methods from artificial intelligence.

Authors:  D Zimmerman; C Kulikowski; L Wang; B Lyons; G T Montelione
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

8.  Sequential resonance assignments in protein 1H nuclear magnetic resonance spectra. Basic pancreatic trypsin inhibitor.

Authors:  G Wagner; K Wüthrich
Journal:  J Mol Biol       Date:  1982-03-05       Impact factor: 5.469

9.  Main-chain-directed strategy for the assignment of 1H NMR spectra of proteins.

Authors:  S W Englander; A J Wand
Journal:  Biochemistry       Date:  1987-09-22       Impact factor: 3.162

10.  Protein three-dimensional structure determination and sequence-specific assignment of 13C and 15N-separated NOE data. A novel real-space ab initio approach.

Authors:  P J Kraulis
Journal:  J Mol Biol       Date:  1994-11-04       Impact factor: 5.469

View more
  27 in total

1.  Sequential NMR assignment of the RAS-binding domain of Byr2.

Authors:  F Huber; W Gronwald; S Wohlgemuth; C Herrmann; M Geyer; A Wittinghofer; H R Kalbitzer
Journal:  J Biomol NMR       Date:  2000-04       Impact factor: 2.835

2.  Ansig for Windows: an interactive computer program for semiautomatic assignment of protein NMR spectra.

Authors:  M Helgstrand; P Kraulis; P Allard; T Härd
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

3.  Conformational flexibility in calcitonin: the dynamic properties of human and salmon calcitonin in solution.

Authors:  P Amodeo; A Motta; G Strazzullo; M A Castiglione Morelli
Journal:  J Biomol NMR       Date:  1999-02       Impact factor: 2.835

4.  Sequence-specific resonance assignment of the Ras-binding domain of AF6.

Authors:  G Steiner; W Kremer; T Linnemann; C Herrmann; M Geyer; H R Kalbitzer
Journal:  J Biomol NMR       Date:  2000-09       Impact factor: 2.835

5.  Sequence-specific resonance assignment of the second Ran-binding domain of human RanBP2.

Authors:  Rolf Döker; Xiaodong Zhao; Werner Kremer; BraslavskyCarolinaInes Villa; Jürgen Kuhlmann; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2002-02       Impact factor: 2.835

6.  Sequential assignment and secondary structure of saratin, an inhibitor of von Willebrand factor-dependent platelet adhesion to collagen.

Authors:  T Maurer; J Bomke; M Frech; T Rysiok; H B Kalbitzer
Journal:  J Biomol NMR       Date:  2001-09       Impact factor: 2.835

7.  Sequential assignment and secondary structure of the 14 kDa chemotactic protein CheY2 from Sinorhizobium meliloti.

Authors:  H Riepl; B Scharf; R Schmitt; H R Kalbitzer; T Maure
Journal:  J Biomol NMR       Date:  2001-03       Impact factor: 2.835

8.  Automated assignment of NOESY NMR spectra using a knowledge based method (KNOWNOE).

Authors:  Wolfram Gronwald; Sherif Moussa; Ralph Elsner; Astrid Jung; Bernhard Ganslmeier; Jochen Trenner; Werner Kremer; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2002-08       Impact factor: 2.835

9.  Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

10.  Mars -- robust automatic backbone assignment of proteins.

Authors:  Young-Sang Jung; Markus Zweckstetter
Journal:  J Biomol NMR       Date:  2004-09       Impact factor: 2.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.