| Literature DB >> 22904960 |
Hoong-Kun Fun, Tze Shyang Chia, Mashooq A Bhat, Mohamed A Al-Omar, Hatem A Abdel-Aziz.
Abstract
In the title compound, C(20)H(19)N(3)OS, the central benzene ring makes dihedral angles of 45.36 (9) and 55.33 (9)° with the thio-phene ring and the dimethyl-substituted benzene ring, respectively. The dihedral angle between the thio-phene ring and dimethyl-substituted benzene ring is 83.60 (9)°. The thio-phene ring and the benzene ring are twisted from the mean plane of the C(=O)-N-N=C bridge [maximum deviation = 0.0860 (13) Å], with dihedral angles of 23.86 (9) and 24.77 (8)°, respectively. An intra-molecular N-H⋯O hydrogen bond generates an S(6) ring. In the crystal, mol-ecules are linked by N-H⋯O and C-H⋯O hydrogen bonds to the same acceptor atom, forming sheets lying parallel to the bc plane. The crystal packing also features C-H⋯π inter-actions.Entities:
Year: 2012 PMID: 22904960 PMCID: PMC3414973 DOI: 10.1107/S160053681203259X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H19N3OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1664 reflections |
| θ = 2.9–24.3° | |
| µ = 0.20 mm−1 | |
| β = 105.344 (2)° | Needle, yellow |
| 0.34 × 0.07 × 0.04 mm | |
| Bruker APEX DUO CCD diffractometer | 5082 independent reflections |
| Radiation source: fine-focus sealed tube | 3338 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 30.0°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 14626 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5082 reflections | (Δ/σ)max < 0.001 |
| 236 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.35 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.10235 (4) | 0.29345 (3) | 0.79119 (6) | 0.02004 (13) | |
| O1 | 0.44269 (10) | 0.16844 (8) | 0.95045 (15) | 0.0164 (3) | |
| N1 | 0.63024 (13) | 0.11358 (11) | 1.0630 (2) | 0.0221 (4) | |
| N2 | 0.38625 (12) | 0.23505 (10) | 1.1518 (2) | 0.0152 (3) | |
| N3 | 0.30320 (11) | 0.26223 (9) | 1.03158 (19) | 0.0152 (3) | |
| C1 | 0.72104 (15) | −0.01298 (12) | 1.0366 (2) | 0.0219 (4) | |
| H1A | 0.6781 | −0.0443 | 1.0854 | 0.026* | |
| C2 | 0.79626 (16) | −0.05289 (12) | 0.9882 (3) | 0.0225 (4) | |
| H2A | 0.8060 | −0.1114 | 1.0056 | 0.027* | |
| C3 | 0.85748 (15) | −0.00697 (12) | 0.9138 (2) | 0.0209 (4) | |
| H3A | 0.9097 | −0.0344 | 0.8817 | 0.025* | |
| C4 | 0.84361 (14) | 0.07824 (12) | 0.8855 (2) | 0.0173 (4) | |
| C5 | 0.76785 (14) | 0.12003 (11) | 0.9365 (2) | 0.0164 (4) | |
| C6 | 0.70796 (14) | 0.07299 (12) | 1.0141 (2) | 0.0171 (4) | |
| C7 | 0.60869 (14) | 0.10490 (11) | 1.2183 (2) | 0.0170 (4) | |
| C8 | 0.67460 (15) | 0.06586 (12) | 1.3575 (2) | 0.0203 (4) | |
| H8A | 0.7349 | 0.0443 | 1.3442 | 0.024* | |
| C9 | 0.65339 (16) | 0.05829 (12) | 1.5130 (3) | 0.0239 (4) | |
| H9A | 0.6989 | 0.0310 | 1.6044 | 0.029* | |
| C10 | 0.56674 (16) | 0.08987 (12) | 1.5376 (2) | 0.0233 (4) | |
| H10A | 0.5523 | 0.0841 | 1.6447 | 0.028* | |
| C11 | 0.50153 (15) | 0.13000 (11) | 1.4038 (2) | 0.0188 (4) | |
| H11A | 0.4420 | 0.1519 | 1.4203 | 0.023* | |
| C12 | 0.52102 (14) | 0.13927 (11) | 1.2440 (2) | 0.0150 (4) | |
| C13 | 0.44837 (13) | 0.18131 (11) | 1.1041 (2) | 0.0142 (4) | |
| C14 | 0.25109 (14) | 0.31569 (11) | 1.0879 (2) | 0.0163 (4) | |
| H14A | 0.2759 | 0.3391 | 1.1983 | 0.020* | |
| C15 | 0.15535 (14) | 0.34032 (11) | 0.9847 (2) | 0.0156 (4) | |
| C16 | 0.09047 (15) | 0.39305 (12) | 1.0313 (3) | 0.0207 (4) | |
| H16A | 0.1061 | 0.4246 | 1.1340 | 0.025* | |
| C17 | −0.00236 (15) | 0.39559 (13) | 0.9101 (3) | 0.0234 (4) | |
| H17A | −0.0560 | 0.4289 | 0.9222 | 0.028* | |
| C18 | −0.00604 (15) | 0.34505 (12) | 0.7747 (3) | 0.0227 (4) | |
| H18A | −0.0625 | 0.3390 | 0.6811 | 0.027* | |
| C19 | 0.90953 (17) | 0.12491 (14) | 0.7978 (3) | 0.0294 (5) | |
| H19A | 0.9586 | 0.0863 | 0.7748 | 0.044* | |
| H19B | 0.9430 | 0.1704 | 0.8716 | 0.044* | |
| H19C | 0.8698 | 0.1483 | 0.6901 | 0.044* | |
| C20 | 0.75020 (17) | 0.21221 (12) | 0.9033 (3) | 0.0241 (4) | |
| H20A | 0.7177 | 0.2355 | 0.9857 | 0.036* | |
| H20B | 0.7081 | 0.2205 | 0.7875 | 0.036* | |
| H20C | 0.8133 | 0.2407 | 0.9149 | 0.036* | |
| H1N2 | 0.3987 (16) | 0.2551 (13) | 1.257 (3) | 0.024 (6)* | |
| H1N1 | 0.5850 (19) | 0.1361 (15) | 0.985 (3) | 0.035 (7)* |
| S1 | 0.0187 (3) | 0.0212 (2) | 0.0189 (2) | 0.0013 (2) | 0.00243 (18) | −0.00158 (19) |
| O1 | 0.0181 (7) | 0.0193 (6) | 0.0122 (6) | 0.0016 (5) | 0.0045 (5) | −0.0001 (5) |
| N1 | 0.0172 (9) | 0.0300 (9) | 0.0203 (9) | 0.0093 (7) | 0.0073 (7) | 0.0073 (7) |
| N2 | 0.0136 (8) | 0.0194 (8) | 0.0116 (7) | 0.0030 (6) | 0.0013 (6) | −0.0016 (6) |
| N3 | 0.0127 (8) | 0.0180 (7) | 0.0134 (7) | 0.0012 (6) | 0.0008 (6) | 0.0013 (6) |
| C1 | 0.0206 (10) | 0.0214 (10) | 0.0231 (10) | −0.0019 (8) | 0.0047 (8) | 0.0026 (8) |
| C2 | 0.0260 (11) | 0.0164 (9) | 0.0239 (10) | 0.0038 (8) | 0.0046 (9) | 0.0002 (8) |
| C3 | 0.0191 (10) | 0.0230 (10) | 0.0201 (10) | 0.0064 (8) | 0.0044 (8) | −0.0023 (8) |
| C4 | 0.0163 (10) | 0.0212 (9) | 0.0141 (9) | −0.0002 (7) | 0.0036 (7) | −0.0004 (7) |
| C5 | 0.0172 (10) | 0.0169 (9) | 0.0128 (9) | 0.0003 (7) | −0.0001 (7) | −0.0004 (7) |
| C6 | 0.0136 (9) | 0.0208 (9) | 0.0163 (9) | 0.0013 (7) | 0.0029 (7) | −0.0004 (7) |
| C7 | 0.0164 (9) | 0.0165 (9) | 0.0174 (9) | 0.0001 (7) | 0.0036 (7) | −0.0006 (7) |
| C8 | 0.0159 (10) | 0.0215 (9) | 0.0203 (10) | 0.0031 (8) | −0.0012 (8) | 0.0011 (8) |
| C9 | 0.0267 (11) | 0.0222 (10) | 0.0171 (10) | 0.0029 (9) | −0.0042 (8) | 0.0003 (8) |
| C10 | 0.0319 (12) | 0.0239 (10) | 0.0126 (9) | 0.0030 (9) | 0.0030 (8) | 0.0005 (8) |
| C11 | 0.0201 (10) | 0.0188 (9) | 0.0174 (9) | 0.0025 (8) | 0.0050 (8) | −0.0007 (7) |
| C12 | 0.0142 (9) | 0.0157 (8) | 0.0143 (9) | −0.0016 (7) | 0.0025 (7) | −0.0005 (7) |
| C13 | 0.0127 (9) | 0.0142 (8) | 0.0160 (9) | −0.0022 (7) | 0.0042 (7) | −0.0002 (7) |
| C14 | 0.0171 (10) | 0.0170 (9) | 0.0141 (9) | −0.0004 (7) | 0.0029 (7) | −0.0003 (7) |
| C15 | 0.0151 (9) | 0.0169 (9) | 0.0155 (9) | 0.0003 (7) | 0.0053 (7) | 0.0029 (7) |
| C16 | 0.0209 (10) | 0.0226 (10) | 0.0195 (10) | 0.0042 (8) | 0.0068 (8) | −0.0013 (8) |
| C17 | 0.0177 (10) | 0.0257 (10) | 0.0280 (11) | 0.0076 (8) | 0.0083 (8) | 0.0073 (9) |
| C18 | 0.0151 (10) | 0.0250 (10) | 0.0253 (11) | −0.0001 (8) | 0.0009 (8) | 0.0060 (8) |
| C19 | 0.0262 (12) | 0.0360 (12) | 0.0306 (12) | 0.0019 (10) | 0.0156 (10) | 0.0064 (9) |
| C20 | 0.0335 (12) | 0.0182 (9) | 0.0225 (10) | 0.0016 (9) | 0.0107 (9) | 0.0003 (8) |
| S1—C18 | 1.709 (2) | C8—C9 | 1.380 (3) |
| S1—C15 | 1.7243 (19) | C8—H8A | 0.9500 |
| O1—C13 | 1.248 (2) | C9—C10 | 1.384 (3) |
| N1—C7 | 1.382 (2) | C9—H9A | 0.9500 |
| N1—C6 | 1.417 (2) | C10—C11 | 1.382 (3) |
| N1—H1N1 | 0.85 (3) | C10—H10A | 0.9500 |
| N2—C13 | 1.354 (2) | C11—C12 | 1.406 (3) |
| N2—N3 | 1.382 (2) | C11—H11A | 0.9500 |
| N2—H1N2 | 0.89 (2) | C12—C13 | 1.475 (3) |
| N3—C14 | 1.287 (2) | C14—C15 | 1.442 (3) |
| C1—C2 | 1.381 (3) | C14—H14A | 0.9500 |
| C1—C6 | 1.391 (3) | C15—C16 | 1.368 (3) |
| C1—H1A | 0.9500 | C16—C17 | 1.415 (3) |
| C2—C3 | 1.387 (3) | C16—H16A | 0.9500 |
| C2—H2A | 0.9500 | C17—C18 | 1.355 (3) |
| C3—C4 | 1.385 (3) | C17—H17A | 0.9500 |
| C3—H3A | 0.9500 | C18—H18A | 0.9500 |
| C4—C5 | 1.411 (3) | C19—H19A | 0.9800 |
| C4—C19 | 1.510 (3) | C19—H19B | 0.9800 |
| C5—C6 | 1.399 (3) | C19—H19C | 0.9800 |
| C5—C20 | 1.505 (3) | C20—H20A | 0.9800 |
| C7—C8 | 1.406 (3) | C20—H20B | 0.9800 |
| C7—C12 | 1.417 (3) | C20—H20C | 0.9800 |
| C18—S1—C15 | 91.42 (10) | C9—C10—H10A | 120.5 |
| C7—N1—C6 | 125.71 (17) | C10—C11—C12 | 121.68 (18) |
| C7—N1—H1N1 | 115.0 (17) | C10—C11—H11A | 119.2 |
| C6—N1—H1N1 | 117.7 (16) | C12—C11—H11A | 119.2 |
| C13—N2—N3 | 119.15 (15) | C11—C12—C7 | 119.14 (17) |
| C13—N2—H1N2 | 121.9 (15) | C11—C12—C13 | 119.70 (17) |
| N3—N2—H1N2 | 118.9 (15) | C7—C12—C13 | 121.12 (16) |
| C14—N3—N2 | 114.37 (15) | O1—C13—N2 | 121.08 (17) |
| C2—C1—C6 | 120.20 (18) | O1—C13—C12 | 123.01 (16) |
| C2—C1—H1A | 119.9 | N2—C13—C12 | 115.90 (15) |
| C6—C1—H1A | 119.9 | N3—C14—C15 | 120.51 (17) |
| C1—C2—C3 | 119.58 (18) | N3—C14—H14A | 119.7 |
| C1—C2—H2A | 120.2 | C15—C14—H14A | 119.7 |
| C3—C2—H2A | 120.2 | C16—C15—C14 | 126.67 (17) |
| C4—C3—C2 | 120.99 (19) | C16—C15—S1 | 111.12 (15) |
| C4—C3—H3A | 119.5 | C14—C15—S1 | 121.70 (14) |
| C2—C3—H3A | 119.5 | C15—C16—C17 | 112.75 (18) |
| C3—C4—C5 | 120.02 (17) | C15—C16—H16A | 123.6 |
| C3—C4—C19 | 119.07 (18) | C17—C16—H16A | 123.6 |
| C5—C4—C19 | 120.90 (17) | C18—C17—C16 | 112.26 (18) |
| C6—C5—C4 | 118.19 (17) | C18—C17—H17A | 123.9 |
| C6—C5—C20 | 121.03 (17) | C16—C17—H17A | 123.9 |
| C4—C5—C20 | 120.76 (17) | C17—C18—S1 | 112.46 (16) |
| C1—C6—C5 | 120.97 (18) | C17—C18—H18A | 123.8 |
| C1—C6—N1 | 119.99 (17) | S1—C18—H18A | 123.8 |
| C5—C6—N1 | 118.97 (17) | C4—C19—H19A | 109.5 |
| N1—C7—C8 | 121.51 (18) | C4—C19—H19B | 109.5 |
| N1—C7—C12 | 120.46 (17) | H19A—C19—H19B | 109.5 |
| C8—C7—C12 | 117.96 (17) | C4—C19—H19C | 109.5 |
| C9—C8—C7 | 121.33 (19) | H19A—C19—H19C | 109.5 |
| C9—C8—H8A | 119.3 | H19B—C19—H19C | 109.5 |
| C7—C8—H8A | 119.3 | C5—C20—H20A | 109.5 |
| C8—C9—C10 | 120.95 (18) | C5—C20—H20B | 109.5 |
| C8—C9—H9A | 119.5 | H20A—C20—H20B | 109.5 |
| C10—C9—H9A | 119.5 | C5—C20—H20C | 109.5 |
| C11—C10—C9 | 118.90 (18) | H20A—C20—H20C | 109.5 |
| C11—C10—H10A | 120.5 | H20B—C20—H20C | 109.5 |
| C13—N2—N3—C14 | −177.33 (16) | C9—C10—C11—C12 | 0.1 (3) |
| C6—C1—C2—C3 | −1.3 (3) | C10—C11—C12—C7 | 1.5 (3) |
| C1—C2—C3—C4 | −0.7 (3) | C10—C11—C12—C13 | 178.95 (17) |
| C2—C3—C4—C5 | 1.6 (3) | N1—C7—C12—C11 | −179.49 (18) |
| C2—C3—C4—C19 | −177.56 (18) | C8—C7—C12—C11 | −2.7 (3) |
| C3—C4—C5—C6 | −0.4 (3) | N1—C7—C12—C13 | 3.1 (3) |
| C19—C4—C5—C6 | 178.70 (18) | C8—C7—C12—C13 | 179.91 (17) |
| C3—C4—C5—C20 | −178.59 (18) | N3—N2—C13—O1 | 13.8 (3) |
| C19—C4—C5—C20 | 0.6 (3) | N3—N2—C13—C12 | −165.63 (15) |
| C2—C1—C6—C5 | 2.5 (3) | C11—C12—C13—O1 | −155.40 (18) |
| C2—C1—C6—N1 | 179.59 (18) | C7—C12—C13—O1 | 22.0 (3) |
| C4—C5—C6—C1 | −1.6 (3) | C11—C12—C13—N2 | 24.0 (2) |
| C20—C5—C6—C1 | 176.56 (18) | C7—C12—C13—N2 | −158.62 (17) |
| C4—C5—C6—N1 | −178.73 (17) | N2—N3—C14—C15 | −170.89 (16) |
| C20—C5—C6—N1 | −0.6 (3) | N3—C14—C15—C16 | 176.61 (19) |
| C7—N1—C6—C1 | 49.4 (3) | N3—C14—C15—S1 | 5.5 (3) |
| C7—N1—C6—C5 | −133.4 (2) | C18—S1—C15—C16 | 0.06 (15) |
| C6—N1—C7—C8 | 12.2 (3) | C18—S1—C15—C14 | 172.39 (16) |
| C6—N1—C7—C12 | −171.05 (18) | C14—C15—C16—C17 | −171.90 (18) |
| N1—C7—C8—C9 | 179.14 (19) | S1—C15—C16—C17 | 0.0 (2) |
| C12—C7—C8—C9 | 2.4 (3) | C15—C16—C17—C18 | 0.0 (3) |
| C7—C8—C9—C10 | −0.8 (3) | C16—C17—C18—S1 | 0.1 (2) |
| C8—C9—C10—C11 | −0.5 (3) | C15—S1—C18—C17 | −0.07 (16) |
| H··· | ||||
| N2—H1 | 0.89 (2) | 1.96 (2) | 2.808 (2) | 160 (2) |
| N1—H1 | 0.85 (2) | 2.02 (3) | 2.704 (2) | 137 (2) |
| C1—H1 | 0.95 | 2.58 | 3.410 (2) | 146 |
| C3—H3 | 0.95 | 2.98 | 3.732 (2) | 137 |
| C9—H9 | 0.95 | 2.84 | 3.649 (2) | 144 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the S1/C15–C18 and C1–C6 rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H1 | 0.89 (2) | 1.96 (2) | 2.808 (2) | 160 (2) |
| N1—H1 | 0.85 (2) | 2.02 (3) | 2.704 (2) | 137 (2) |
| C1—H1 | 0.95 | 2.58 | 3.410 (2) | 146 |
| C3—H3 | 0.95 | 2.98 | 3.732 (2) | 137 |
| C9—H9 | 0.95 | 2.84 | 3.649 (2) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .