| Literature DB >> 22606092 |
Mashooq A Bhat, Hatem A Abdel-Aziz, Hazem A Ghabbour, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
In the title compound, C(16)H(21)N(3)O, the mol-ecule adopts an E conformation about the central C=N double bond. The 2-methyl-pent-2-ene group is disordered over two sets of sites, with a refined occupancy ratio of 0.785 (8):0.215 (8). The dihedral angle between the essentially planar [the r.m.s. value for the major component is 0.021 (7) and its maximum deviation is 0.025 (4) Å; the r.m.s. value for the minor component is 0.03 (4) and its maximum deviation is 0.05 (3) Å] major and minor components of the 2-methyl-but-2-ene group is 35.9 (13)°. In the crystal, C-H⋯O and N-H⋯O hydrogen bonds link the molecules, with the same O atom acting as the acceptor. This results in C(1) (1)(4) and C(1) (1)(5) [001] chains.Entities:
Year: 2012 PMID: 22606092 PMCID: PMC3344089 DOI: 10.1107/S1600536812009075
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H21N3O | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 1053 reflections |
| θ = 11.3–69.5° | |
| µ = 0.56 mm−1 | |
| β = 101.854 (3)° | Block, colourless |
| 0.90 × 0.27 × 0.17 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 2978 independent reflections |
| Radiation source: fine-focus sealed tube | 2376 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 69.7°, θmin = 5.2° |
| Absorption correction: multi-scan ( | |
| 16548 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2978 reflections | Δρmax = 0.13 e Å−3 |
| 239 parameters | Δρmin = −0.14 e Å−3 |
| 12 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0032 (6) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| O1 | 0.30512 (6) | 0.61845 (10) | 0.31148 (14) | 0.0640 (3) | |
| N1 | 0.06078 (9) | 0.62725 (17) | 0.5444 (3) | 0.0897 (5) | |
| N2 | 0.40983 (7) | 0.76093 (12) | 0.49025 (19) | 0.0656 (4) | |
| N3 | 0.33659 (7) | 0.74425 (12) | 0.52777 (18) | 0.0602 (4) | |
| C1 | 0.09771 (12) | 0.54801 (19) | 0.4767 (3) | 0.0905 (7) | |
| H1A | 0.0724 | 0.4805 | 0.4511 | 0.109* | |
| C2 | 0.17110 (10) | 0.55920 (16) | 0.4418 (3) | 0.0746 (5) | |
| H2A | 0.1942 | 0.5007 | 0.3941 | 0.090* | |
| C3 | 0.20985 (8) | 0.65855 (13) | 0.47852 (19) | 0.0558 (4) | |
| C4 | 0.17217 (9) | 0.74139 (15) | 0.5489 (2) | 0.0686 (5) | |
| H4A | 0.1959 | 0.8099 | 0.5756 | 0.082* | |
| C5 | 0.09864 (10) | 0.72159 (19) | 0.5792 (3) | 0.0822 (6) | |
| H5A | 0.0742 | 0.7785 | 0.6274 | 0.099* | |
| C6 | 0.28809 (8) | 0.67137 (13) | 0.43211 (19) | 0.0534 (4) | |
| C7 | 0.45447 (9) | 0.82229 (15) | 0.6011 (2) | 0.0645 (4) | |
| H7A | 0.4366 | 0.8509 | 0.6957 | 0.077* | |
| C8 | 0.53221 (10) | 0.84735 (17) | 0.5801 (3) | 0.0746 (5) | |
| H8A | 0.5485 | 0.8169 | 0.4846 | 0.089* | |
| C9 | 0.58251 (11) | 0.91090 (18) | 0.6876 (3) | 0.0837 (6) | |
| C10 | 0.66541 (16) | 0.9344 (4) | 0.6696 (6) | 0.0871 (10) | 0.785 (8) |
| H10A | 0.6713 | 1.0139 | 0.6600 | 0.105* | 0.785 (8) |
| H10B | 0.7002 | 0.9109 | 0.7762 | 0.105* | 0.785 (8) |
| C11 | 0.69190 (18) | 0.8806 (3) | 0.5187 (5) | 0.0900 (11) | 0.785 (8) |
| H11A | 0.6929 | 0.8008 | 0.5341 | 0.108* | 0.785 (8) |
| H11B | 0.6550 | 0.8975 | 0.4118 | 0.108* | 0.785 (8) |
| C12 | 0.77113 (18) | 0.9196 (3) | 0.5033 (6) | 0.0828 (10) | 0.785 (8) |
| H12A | 0.7710 | 0.9863 | 0.4439 | 0.099* | 0.785 (8) |
| C13 | 0.8396 (4) | 0.8782 (5) | 0.5571 (15) | 0.0811 (19) | 0.785 (8) |
| C14 | 0.9134 (3) | 0.9352 (6) | 0.5393 (11) | 0.1003 (15) | 0.785 (8) |
| H14A | 0.9011 | 1.0045 | 0.4798 | 0.150* | 0.785 (8) |
| H14B | 0.9416 | 0.8891 | 0.4739 | 0.150* | 0.785 (8) |
| H14C | 0.9448 | 0.9486 | 0.6529 | 0.150* | 0.785 (8) |
| C15 | 0.8582 (5) | 0.7702 (6) | 0.6537 (11) | 0.162 (3) | 0.785 (8) |
| H15A | 0.8121 | 0.7420 | 0.6863 | 0.242* | 0.785 (8) |
| H15B | 0.8977 | 0.7823 | 0.7564 | 0.242* | 0.785 (8) |
| H15C | 0.8766 | 0.7175 | 0.5797 | 0.242* | 0.785 (8) |
| C10A | 0.6475 (6) | 0.9475 (14) | 0.5992 (19) | 0.0871 (10) | 0.215 (8) |
| H10C | 0.6314 | 0.9371 | 0.4743 | 0.105* | 0.215 (8) |
| H10D | 0.6577 | 1.0258 | 0.6210 | 0.105* | 0.215 (8) |
| C11A | 0.7184 (8) | 0.8848 (17) | 0.663 (4) | 0.169 (13) | 0.215 (8) |
| H11C | 0.7112 | 0.8104 | 0.6156 | 0.203* | 0.215 (8) |
| H11D | 0.7257 | 0.8787 | 0.7887 | 0.203* | 0.215 (8) |
| C12A | 0.7911 (7) | 0.9321 (12) | 0.620 (4) | 0.123 (7) | 0.215 (8) |
| H12B | 0.7971 | 1.0081 | 0.6089 | 0.148* | 0.215 (8) |
| C13A | 0.8464 (13) | 0.8625 (17) | 0.599 (5) | 0.080 (8) | 0.215 (8) |
| C14A | 0.9212 (14) | 0.901 (3) | 0.562 (6) | 0.170 (16) | 0.215 (8) |
| H14D | 0.9258 | 0.9793 | 0.5797 | 0.255* | 0.215 (8) |
| H14E | 0.9232 | 0.8837 | 0.4434 | 0.255* | 0.215 (8) |
| H14F | 0.9633 | 0.8641 | 0.6388 | 0.255* | 0.215 (8) |
| C15A | 0.8294 (13) | 0.7391 (13) | 0.588 (4) | 0.137 (8) | 0.215 (8) |
| H15D | 0.7743 | 0.7273 | 0.5742 | 0.206* | 0.215 (8) |
| H15E | 0.8562 | 0.7036 | 0.6925 | 0.206* | 0.215 (8) |
| H15F | 0.8468 | 0.7084 | 0.4895 | 0.206* | 0.215 (8) |
| C16 | 0.56438 (16) | 0.9641 (3) | 0.8453 (4) | 0.1287 (12) | |
| H16A | 0.5169 | 0.9337 | 0.8683 | 0.193* | |
| H16B | 0.5584 | 1.0424 | 0.8265 | 0.193* | |
| H16C | 0.6061 | 0.9505 | 0.9432 | 0.193* | |
| H1N3 | 0.3250 (10) | 0.7786 (15) | 0.617 (2) | 0.063 (5)* |
| O1 | 0.0566 (6) | 0.0690 (7) | 0.0683 (7) | −0.0046 (5) | 0.0170 (5) | −0.0065 (5) |
| N1 | 0.0508 (8) | 0.1053 (13) | 0.1165 (14) | −0.0154 (8) | 0.0259 (8) | −0.0068 (10) |
| N2 | 0.0505 (7) | 0.0773 (9) | 0.0744 (8) | −0.0136 (6) | 0.0255 (6) | −0.0094 (7) |
| N3 | 0.0465 (7) | 0.0721 (9) | 0.0658 (8) | −0.0116 (6) | 0.0201 (6) | −0.0093 (6) |
| C1 | 0.0625 (10) | 0.0804 (13) | 0.1331 (18) | −0.0218 (10) | 0.0307 (11) | −0.0046 (12) |
| C2 | 0.0580 (9) | 0.0658 (10) | 0.1026 (13) | −0.0102 (8) | 0.0223 (9) | −0.0010 (9) |
| C3 | 0.0449 (7) | 0.0622 (9) | 0.0593 (8) | −0.0041 (6) | 0.0088 (6) | 0.0055 (7) |
| C4 | 0.0483 (8) | 0.0737 (11) | 0.0836 (11) | −0.0076 (7) | 0.0132 (7) | −0.0115 (8) |
| C5 | 0.0489 (9) | 0.0978 (14) | 0.1012 (14) | −0.0048 (9) | 0.0183 (9) | −0.0194 (11) |
| C6 | 0.0462 (7) | 0.0559 (8) | 0.0584 (8) | −0.0027 (6) | 0.0113 (6) | 0.0051 (6) |
| C7 | 0.0512 (8) | 0.0720 (10) | 0.0741 (10) | −0.0121 (7) | 0.0217 (7) | −0.0097 (8) |
| C8 | 0.0554 (9) | 0.0845 (12) | 0.0895 (12) | −0.0165 (8) | 0.0281 (8) | −0.0174 (9) |
| C9 | 0.0561 (10) | 0.0823 (13) | 0.1158 (15) | −0.0172 (9) | 0.0251 (10) | −0.0202 (11) |
| C10 | 0.0477 (14) | 0.0936 (18) | 0.117 (3) | −0.0193 (15) | 0.0097 (16) | −0.015 (2) |
| C11 | 0.0575 (16) | 0.111 (2) | 0.107 (2) | −0.0183 (15) | 0.0294 (15) | −0.0033 (18) |
| C12 | 0.0540 (15) | 0.0843 (19) | 0.113 (2) | −0.0069 (13) | 0.0249 (15) | 0.0191 (18) |
| C13 | 0.078 (3) | 0.077 (3) | 0.093 (4) | 0.007 (2) | 0.026 (2) | 0.018 (3) |
| C14 | 0.0549 (18) | 0.110 (4) | 0.140 (3) | 0.004 (2) | 0.030 (2) | 0.001 (3) |
| C15 | 0.162 (6) | 0.127 (5) | 0.209 (7) | 0.022 (4) | 0.068 (5) | 0.075 (5) |
| C10A | 0.0477 (14) | 0.0936 (18) | 0.117 (3) | −0.0193 (15) | 0.0097 (16) | −0.015 (2) |
| C11A | 0.081 (9) | 0.146 (15) | 0.29 (3) | 0.031 (9) | 0.064 (14) | 0.12 (2) |
| C12A | 0.064 (7) | 0.086 (8) | 0.22 (2) | −0.013 (6) | 0.039 (11) | 0.026 (12) |
| C13A | 0.072 (8) | 0.069 (9) | 0.11 (2) | 0.023 (6) | 0.037 (10) | 0.034 (8) |
| C14A | 0.095 (14) | 0.12 (2) | 0.28 (4) | 0.012 (12) | 0.001 (16) | −0.03 (2) |
| C15A | 0.121 (14) | 0.070 (9) | 0.20 (2) | 0.029 (9) | −0.008 (12) | −0.009 (10) |
| C16 | 0.0951 (17) | 0.160 (3) | 0.137 (2) | −0.0471 (18) | 0.0378 (15) | −0.071 (2) |
| O1—C6 | 1.2283 (18) | C12—C13 | 1.290 (7) |
| N1—C5 | 1.318 (3) | C12—H12A | 0.9300 |
| N1—C1 | 1.326 (3) | C13—C14 | 1.497 (6) |
| N2—C7 | 1.280 (2) | C13—C15 | 1.510 (7) |
| N2—N3 | 1.3903 (17) | C14—H14A | 0.9600 |
| N3—C6 | 1.341 (2) | C14—H14B | 0.9600 |
| N3—H1N3 | 0.873 (18) | C14—H14C | 0.9600 |
| C1—C2 | 1.377 (2) | C15—H15A | 0.9600 |
| C1—H1A | 0.9300 | C15—H15B | 0.9600 |
| C2—C3 | 1.379 (2) | C15—H15C | 0.9600 |
| C2—H2A | 0.9300 | C10A—C11A | 1.454 (14) |
| C3—C4 | 1.375 (2) | C10A—H10C | 0.9700 |
| C3—C6 | 1.4985 (18) | C10A—H10D | 0.9700 |
| C4—C5 | 1.380 (2) | C11A—C12A | 1.497 (13) |
| C4—H4A | 0.9300 | C11A—H11C | 0.9700 |
| C5—H5A | 0.9300 | C11A—H11D | 0.9700 |
| C7—C8 | 1.439 (2) | C12A—C13A | 1.320 (16) |
| C7—H7A | 0.9300 | C12A—H12B | 0.9300 |
| C8—C9 | 1.331 (3) | C13A—C14A | 1.474 (16) |
| C8—H8A | 0.9300 | C13A—C15A | 1.518 (17) |
| C9—C16 | 1.485 (3) | C14A—H14D | 0.9600 |
| C9—C10 | 1.516 (2) | C14A—H14E | 0.9600 |
| C9—C10A | 1.517 (3) | C14A—H14F | 0.9600 |
| C10—C11 | 1.505 (4) | C15A—H15D | 0.9600 |
| C10—H10A | 0.9700 | C15A—H15E | 0.9600 |
| C10—H10B | 0.9700 | C15A—H15F | 0.9600 |
| C11—C12 | 1.496 (4) | C16—H16A | 0.9600 |
| C11—H11A | 0.9700 | C16—H16B | 0.9600 |
| C11—H11B | 0.9700 | C16—H16C | 0.9600 |
| C5—N1—C1 | 116.07 (15) | C12—C13—C15 | 126.1 (5) |
| C7—N2—N3 | 113.78 (13) | C14—C13—C15 | 110.0 (6) |
| C6—N3—N2 | 118.96 (13) | C13—C14—H14A | 109.5 |
| C6—N3—H1N3 | 122.3 (12) | C13—C14—H14B | 109.5 |
| N2—N3—H1N3 | 118.6 (12) | H14A—C14—H14B | 109.5 |
| N1—C1—C2 | 124.24 (18) | C13—C14—H14C | 109.5 |
| N1—C1—H1A | 117.9 | H14A—C14—H14C | 109.5 |
| C2—C1—H1A | 117.9 | H14B—C14—H14C | 109.5 |
| C1—C2—C3 | 118.98 (18) | C13—C15—H15A | 109.5 |
| C1—C2—H2A | 120.5 | C13—C15—H15B | 109.5 |
| C3—C2—H2A | 120.5 | H15A—C15—H15B | 109.5 |
| C4—C3—C2 | 117.33 (14) | C13—C15—H15C | 109.5 |
| C4—C3—C6 | 124.20 (14) | H15A—C15—H15C | 109.5 |
| C2—C3—C6 | 118.40 (15) | H15B—C15—H15C | 109.5 |
| C3—C4—C5 | 119.13 (17) | C11A—C10A—C9 | 111.1 (10) |
| C3—C4—H4A | 120.4 | C11A—C10A—H10C | 109.4 |
| C5—C4—H4A | 120.4 | C9—C10A—H10C | 109.4 |
| N1—C5—C4 | 124.25 (18) | C11A—C10A—H10D | 109.4 |
| N1—C5—H5A | 117.9 | C9—C10A—H10D | 109.4 |
| C4—C5—H5A | 117.9 | H10C—C10A—H10D | 108.0 |
| O1—C6—N3 | 123.05 (13) | C10A—C11A—C12A | 115.6 (10) |
| O1—C6—C3 | 120.88 (13) | C10A—C11A—H11C | 108.4 |
| N3—C6—C3 | 116.06 (13) | C12A—C11A—H11C | 108.4 |
| N2—C7—C8 | 120.42 (15) | C10A—C11A—H11D | 108.4 |
| N2—C7—H7A | 119.8 | C12A—C11A—H11D | 108.4 |
| C8—C7—H7A | 119.8 | H11C—C11A—H11D | 107.5 |
| C9—C8—C7 | 124.73 (17) | C13A—C12A—C11A | 117.9 (14) |
| C9—C8—H8A | 117.6 | C13A—C12A—H12B | 121.0 |
| C7—C8—H8A | 117.6 | C11A—C12A—H12B | 121.0 |
| C8—C9—C16 | 123.28 (17) | C12A—C13A—C14A | 122.2 (17) |
| C8—C9—C10 | 124.9 (2) | C12A—C13A—C15A | 119.4 (16) |
| C16—C9—C10 | 111.7 (2) | C14A—C13A—C15A | 118.0 (18) |
| C8—C9—C10A | 110.0 (7) | C13A—C14A—H14D | 109.5 |
| C16—C9—C10A | 124.4 (7) | C13A—C14A—H14E | 109.5 |
| C10—C9—C10A | 22.7 (5) | H14D—C14A—H14E | 109.5 |
| C11—C10—C9 | 116.7 (3) | C13A—C14A—H14F | 109.5 |
| C11—C10—H10A | 108.1 | H14D—C14A—H14F | 109.5 |
| C9—C10—H10A | 108.1 | H14E—C14A—H14F | 109.5 |
| C11—C10—H10B | 108.1 | C13A—C15A—H15D | 109.5 |
| C9—C10—H10B | 108.1 | C13A—C15A—H15E | 109.5 |
| H10A—C10—H10B | 107.3 | H15D—C15A—H15E | 109.5 |
| C12—C11—C10 | 111.7 (3) | C13A—C15A—H15F | 109.5 |
| C12—C11—H11A | 109.3 | H15D—C15A—H15F | 109.5 |
| C10—C11—H11A | 109.3 | H15E—C15A—H15F | 109.5 |
| C12—C11—H11B | 109.3 | C9—C16—H16A | 109.5 |
| C10—C11—H11B | 109.3 | C9—C16—H16B | 109.5 |
| H11A—C11—H11B | 107.9 | H16A—C16—H16B | 109.5 |
| C13—C12—C11 | 132.1 (4) | C9—C16—H16C | 109.5 |
| C13—C12—H12A | 113.9 | H16A—C16—H16C | 109.5 |
| C11—C12—H12A | 113.9 | H16B—C16—H16C | 109.5 |
| C12—C13—C14 | 123.8 (6) | ||
| C7—N2—N3—C6 | −172.49 (15) | C7—C8—C9—C16 | 0.4 (4) |
| C5—N1—C1—C2 | −0.2 (4) | C7—C8—C9—C10 | 177.8 (3) |
| N1—C1—C2—C3 | 0.0 (4) | C7—C8—C9—C10A | −162.8 (6) |
| C1—C2—C3—C4 | 0.0 (3) | C8—C9—C10—C11 | −0.3 (6) |
| C1—C2—C3—C6 | −177.16 (18) | C16—C9—C10—C11 | 177.4 (4) |
| C2—C3—C4—C5 | 0.1 (3) | C10A—C9—C10—C11 | −54.2 (19) |
| C6—C3—C4—C5 | 177.14 (16) | C9—C10—C11—C12 | 173.7 (3) |
| C1—N1—C5—C4 | 0.3 (3) | C10—C11—C12—C13 | 96.6 (9) |
| C3—C4—C5—N1 | −0.3 (3) | C11—C12—C13—C14 | −175.3 (6) |
| N2—N3—C6—O1 | −0.3 (2) | C11—C12—C13—C15 | 1.4 (15) |
| N2—N3—C6—C3 | −179.34 (13) | C8—C9—C10A—C11A | −103 (2) |
| C4—C3—C6—O1 | −149.52 (17) | C16—C9—C10A—C11A | 94 (2) |
| C2—C3—C6—O1 | 27.5 (2) | C10—C9—C10A—C11A | 31.7 (18) |
| C4—C3—C6—N3 | 29.5 (2) | C9—C10A—C11A—C12A | −165.1 (17) |
| C2—C3—C6—N3 | −153.47 (16) | C10A—C11A—C12A—C13A | −149 (3) |
| N3—N2—C7—C8 | −179.95 (16) | C11A—C12A—C13A—C14A | −178 (3) |
| N2—C7—C8—C9 | 179.4 (2) | C11A—C12A—C13A—C15A | 10 (5) |
| H··· | ||||
| N3—H1 | 0.873 (17) | 2.052 (17) | 2.9167 (18) | 170.8 (16) |
| C4—H4 | 0.93 | 2.53 | 3.251 (2) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H1 | 0.873 (17) | 2.052 (17) | 2.9167 (18) | 170.8 (16) |
| C4—H4 | 0.93 | 2.53 | 3.251 (2) | 135 |
Symmetry code: (i) .