| Literature DB >> 22589878 |
Mashooq A Bhat, Hatem A Abdel-Aziz, Hazem A Ghabbour, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
In the title compound, C(16)H(17)N(3)O·H(2)O, the isonicotinohydrazide mol-ecule adopts an E conformation about the central C=N double bond. The dihedral angle between the pyridine and the benzene rings is 54.56 (15)°. In the crystal, mol-ecules are connected via N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds, forming a three-dimensional network.Entities:
Year: 2012 PMID: 22589878 PMCID: PMC3343969 DOI: 10.1107/S1600536812009099
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H17N3O·H2O | |
| Orthorhombic, | Cu |
| Hall symbol: P 2ac 2ab | Cell parameters from 1751 reflections |
| θ = 4.5–65.6° | |
| µ = 0.65 mm−1 | |
| Block, colourless | |
| 0.89 × 0.19 × 0.13 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 2939 independent reflections |
| Radiation source: fine-focus sealed tube | 2499 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 71.8°, θmin = 4.5° |
| Absorption correction: multi-scan ( | |
| 6473 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.22 e Å−3 | |
| 2939 reflections | Δρmin = −0.28 e Å−3 |
| 193 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.0045 (8) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack, H. D. (1983). |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.8 (4) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 1.1044 (3) | −0.05606 (15) | 0.18186 (11) | 0.0761 (6) | |
| N1 | 1.1036 (4) | 0.1562 (2) | −0.06565 (14) | 0.0839 (8) | |
| H1N1 | 0.9718 | 0.1817 | 0.2093 | 0.101* | |
| N2 | 1.0132 (3) | 0.11714 (17) | 0.22203 (11) | 0.0573 (5) | |
| N3 | 1.0056 (3) | 0.08469 (18) | 0.29864 (11) | 0.0578 (5) | |
| C1 | 1.1390 (4) | 0.1925 (2) | 0.06922 (16) | 0.0666 (7) | |
| H1A | 1.1742 | 0.2420 | 0.1080 | 0.080* | |
| C2 | 1.1526 (5) | 0.2221 (3) | −0.00740 (18) | 0.0785 (9) | |
| H2A | 1.1990 | 0.2927 | −0.0192 | 0.094* | |
| C3 | 1.0378 (5) | 0.0560 (3) | −0.04701 (17) | 0.0835 (9) | |
| H3A | 1.0012 | 0.0089 | −0.0869 | 0.100* | |
| C4 | 1.0204 (4) | 0.0177 (2) | 0.02743 (15) | 0.0670 (7) | |
| H4A | 0.9750 | −0.0538 | 0.0374 | 0.080* | |
| C5 | 1.0715 (3) | 0.0872 (2) | 0.08717 (13) | 0.0536 (5) | |
| C6 | 1.0648 (3) | 0.0424 (2) | 0.16813 (14) | 0.0555 (6) | |
| C7 | 0.9297 (3) | 0.1536 (2) | 0.34324 (14) | 0.0571 (6) | |
| H7A | 0.8811 | 0.2185 | 0.3217 | 0.069* | |
| C8 | 0.9143 (3) | 0.1369 (2) | 0.42615 (13) | 0.0515 (5) | |
| C9 | 0.9887 (4) | 0.0448 (2) | 0.46475 (15) | 0.0604 (6) | |
| H9A | 1.0450 | −0.0113 | 0.4366 | 0.072* | |
| C10 | 0.9792 (4) | 0.0366 (2) | 0.54362 (15) | 0.0689 (7) | |
| H10A | 1.0299 | −0.0253 | 0.5680 | 0.083* | |
| C11 | 0.8961 (4) | 0.1178 (2) | 0.58831 (15) | 0.0692 (7) | |
| C12 | 0.8237 (4) | 0.2085 (3) | 0.54993 (16) | 0.0699 (7) | |
| H12A | 0.7684 | 0.2649 | 0.5783 | 0.084* | |
| C13 | 0.8312 (4) | 0.2176 (2) | 0.47065 (15) | 0.0611 (6) | |
| H13A | 0.7793 | 0.2792 | 0.4465 | 0.073* | |
| C14 | 0.8851 (9) | 0.1105 (4) | 0.67642 (19) | 0.1318 (19) | |
| H14A | 0.7599 | 0.1151 | 0.6836 | 0.158* | |
| C15 | 0.9192 (7) | −0.0015 (4) | 0.7099 (2) | 0.1196 (15) | |
| H15A | 0.8882 | −0.0011 | 0.7637 | 0.179* | |
| H15B | 1.0396 | −0.0190 | 0.7048 | 0.179* | |
| H15C | 0.8521 | −0.0576 | 0.6832 | 0.179* | |
| C16 | 0.9387 (9) | 0.2120 (5) | 0.7158 (2) | 0.149 (2) | |
| H16A | 0.8925 | 0.2121 | 0.7674 | 0.223* | |
| H16B | 0.8968 | 0.2771 | 0.6883 | 0.223* | |
| H16C | 1.0624 | 0.2145 | 0.7181 | 0.223* | |
| O1W | 0.8651 (3) | 0.32125 (15) | 0.18150 (11) | 0.0822 (7) | |
| H1W1 | 0.7748 | 0.3209 | 0.1531 | 0.123* | |
| H2W1 | 0.8803 | 0.3754 | 0.2127 | 0.123* |
| O1 | 0.1132 (16) | 0.0556 (10) | 0.0594 (10) | 0.0199 (10) | 0.0095 (11) | 0.0108 (9) |
| N1 | 0.114 (2) | 0.0893 (18) | 0.0484 (12) | 0.0015 (16) | 0.0134 (14) | 0.0090 (12) |
| N2 | 0.0738 (13) | 0.0546 (12) | 0.0436 (10) | 0.0047 (10) | 0.0017 (9) | 0.0057 (8) |
| N3 | 0.0726 (13) | 0.0566 (12) | 0.0443 (10) | 0.0010 (10) | −0.0025 (9) | 0.0063 (9) |
| C1 | 0.0849 (17) | 0.0594 (15) | 0.0555 (14) | −0.0062 (13) | 0.0094 (13) | −0.0003 (12) |
| C2 | 0.107 (2) | 0.0670 (18) | 0.0617 (17) | −0.0041 (16) | 0.0213 (16) | 0.0106 (14) |
| C3 | 0.113 (3) | 0.086 (2) | 0.0525 (15) | −0.0043 (19) | −0.0001 (16) | −0.0066 (14) |
| C4 | 0.0819 (18) | 0.0642 (16) | 0.0547 (14) | −0.0060 (14) | 0.0020 (13) | 0.0000 (12) |
| C5 | 0.0623 (13) | 0.0537 (13) | 0.0448 (11) | 0.0029 (11) | 0.0079 (10) | 0.0043 (10) |
| C6 | 0.0638 (13) | 0.0541 (14) | 0.0486 (12) | 0.0022 (11) | 0.0030 (11) | 0.0030 (10) |
| C7 | 0.0697 (14) | 0.0512 (13) | 0.0504 (13) | 0.0021 (12) | −0.0057 (11) | 0.0055 (10) |
| C8 | 0.0559 (11) | 0.0526 (13) | 0.0462 (11) | 0.0002 (10) | −0.0027 (10) | 0.0009 (9) |
| C9 | 0.0750 (16) | 0.0530 (13) | 0.0531 (13) | 0.0117 (12) | 0.0005 (12) | 0.0027 (10) |
| C10 | 0.0871 (19) | 0.0657 (16) | 0.0538 (14) | 0.0139 (14) | −0.0047 (13) | 0.0083 (12) |
| C11 | 0.0913 (19) | 0.0708 (17) | 0.0455 (13) | 0.0007 (15) | 0.0039 (13) | −0.0005 (12) |
| C12 | 0.0798 (18) | 0.0674 (16) | 0.0624 (16) | 0.0095 (14) | 0.0115 (13) | −0.0081 (14) |
| C13 | 0.0659 (15) | 0.0567 (14) | 0.0607 (14) | 0.0118 (12) | −0.0004 (12) | 0.0022 (11) |
| C14 | 0.238 (6) | 0.108 (3) | 0.0494 (18) | 0.018 (4) | 0.006 (3) | 0.0001 (19) |
| C15 | 0.149 (4) | 0.149 (4) | 0.0615 (19) | −0.022 (3) | 0.008 (2) | 0.034 (2) |
| C16 | 0.204 (5) | 0.180 (5) | 0.062 (2) | −0.002 (5) | −0.027 (3) | −0.026 (3) |
| O1W | 0.1251 (18) | 0.0586 (11) | 0.0628 (11) | 0.0163 (11) | −0.0286 (12) | −0.0119 (9) |
| O1—C6 | 1.224 (3) | C9—C10 | 1.368 (3) |
| N1—C3 | 1.326 (4) | C9—H9A | 0.9300 |
| N1—C2 | 1.327 (4) | C10—C11 | 1.389 (4) |
| N2—C6 | 1.343 (3) | C10—H10A | 0.9300 |
| N2—N3 | 1.379 (3) | C11—C12 | 1.377 (4) |
| N2—H1N1 | 0.8550 | C11—C14 | 1.528 (4) |
| N3—C7 | 1.266 (3) | C12—C13 | 1.376 (4) |
| C1—C2 | 1.373 (4) | C12—H12A | 0.9300 |
| C1—C5 | 1.383 (4) | C13—H13A | 0.9300 |
| C1—H1A | 0.9300 | C14—C16 | 1.438 (6) |
| C2—H2A | 0.9300 | C14—C15 | 1.465 (6) |
| C3—C4 | 1.370 (4) | C14—H14A | 0.9800 |
| C3—H3A | 0.9300 | C15—H15A | 0.9600 |
| C4—C5 | 1.376 (4) | C15—H15B | 0.9600 |
| C4—H4A | 0.9300 | C15—H15C | 0.9600 |
| C5—C6 | 1.496 (3) | C16—H16A | 0.9600 |
| C7—C8 | 1.451 (3) | C16—H16B | 0.9600 |
| C7—H7A | 0.9300 | C16—H16C | 0.9600 |
| C8—C13 | 1.382 (3) | O1W—H1W1 | 0.8541 |
| C8—C9 | 1.398 (3) | O1W—H2W1 | 0.8437 |
| C3—N1—C2 | 116.6 (3) | C9—C10—C11 | 122.0 (3) |
| C6—N2—N3 | 119.78 (19) | C9—C10—H10A | 119.0 |
| C6—N2—H1N1 | 121.2 | C11—C10—H10A | 119.0 |
| N3—N2—H1N1 | 118.5 | C12—C11—C10 | 117.1 (2) |
| C7—N3—N2 | 115.2 (2) | C12—C11—C14 | 120.1 (3) |
| C2—C1—C5 | 118.3 (3) | C10—C11—C14 | 122.7 (3) |
| C2—C1—H1A | 120.9 | C13—C12—C11 | 121.5 (3) |
| C5—C1—H1A | 120.9 | C13—C12—H12A | 119.2 |
| N1—C2—C1 | 124.1 (3) | C11—C12—H12A | 119.2 |
| N1—C2—H2A | 117.9 | C12—C13—C8 | 121.4 (3) |
| C1—C2—H2A | 117.9 | C12—C13—H13A | 119.3 |
| N1—C3—C4 | 124.0 (3) | C8—C13—H13A | 119.3 |
| N1—C3—H3A | 118.0 | C16—C14—C15 | 120.7 (4) |
| C4—C3—H3A | 118.0 | C16—C14—C11 | 114.1 (4) |
| C3—C4—C5 | 118.7 (3) | C15—C14—C11 | 115.8 (3) |
| C3—C4—H4A | 120.7 | C16—C14—H14A | 100.3 |
| C5—C4—H4A | 120.7 | C15—C14—H14A | 100.3 |
| C4—C5—C1 | 118.4 (2) | C11—C14—H14A | 100.3 |
| C4—C5—C6 | 118.8 (2) | C14—C15—H15A | 109.5 |
| C1—C5—C6 | 122.6 (2) | C14—C15—H15B | 109.5 |
| O1—C6—N2 | 124.2 (2) | H15A—C15—H15B | 109.5 |
| O1—C6—C5 | 120.5 (2) | C14—C15—H15C | 109.5 |
| N2—C6—C5 | 115.3 (2) | H15A—C15—H15C | 109.5 |
| N3—C7—C8 | 123.5 (2) | H15B—C15—H15C | 109.5 |
| N3—C7—H7A | 118.2 | C14—C16—H16A | 109.5 |
| C8—C7—H7A | 118.2 | C14—C16—H16B | 109.5 |
| C13—C8—C9 | 117.4 (2) | H16A—C16—H16B | 109.5 |
| C13—C8—C7 | 119.6 (2) | C14—C16—H16C | 109.5 |
| C9—C8—C7 | 122.9 (2) | H16A—C16—H16C | 109.5 |
| C10—C9—C8 | 120.5 (2) | H16B—C16—H16C | 109.5 |
| C10—C9—H9A | 119.7 | H1W1—O1W—H2W1 | 119.0 |
| C8—C9—H9A | 119.7 | ||
| C6—N2—N3—C7 | −169.0 (3) | N3—C7—C8—C13 | 179.0 (3) |
| C3—N1—C2—C1 | 0.0 (5) | N3—C7—C8—C9 | 2.7 (4) |
| C5—C1—C2—N1 | 0.6 (5) | C13—C8—C9—C10 | −0.3 (4) |
| C2—N1—C3—C4 | −0.9 (5) | C7—C8—C9—C10 | 176.0 (3) |
| N1—C3—C4—C5 | 1.0 (5) | C8—C9—C10—C11 | 0.2 (5) |
| C3—C4—C5—C1 | −0.3 (4) | C9—C10—C11—C12 | −0.4 (5) |
| C3—C4—C5—C6 | −175.6 (3) | C9—C10—C11—C14 | −179.6 (4) |
| C2—C1—C5—C4 | −0.4 (4) | C10—C11—C12—C13 | 0.8 (5) |
| C2—C1—C5—C6 | 174.7 (3) | C14—C11—C12—C13 | −179.9 (4) |
| N3—N2—C6—O1 | 1.3 (4) | C11—C12—C13—C8 | −1.1 (5) |
| N3—N2—C6—C5 | −178.9 (2) | C9—C8—C13—C12 | 0.8 (4) |
| C4—C5—C6—O1 | 38.5 (4) | C7—C8—C13—C12 | −175.7 (3) |
| C1—C5—C6—O1 | −136.6 (3) | C12—C11—C14—C16 | −50.3 (7) |
| C4—C5—C6—N2 | −141.4 (3) | C10—C11—C14—C16 | 128.9 (5) |
| C1—C5—C6—N2 | 43.6 (4) | C12—C11—C14—C15 | 162.9 (4) |
| N2—N3—C7—C8 | −177.5 (2) | C10—C11—C14—C15 | −17.9 (7) |
| H··· | ||||
| N2—H1 | 0.85 | 1.90 | 2.757 (3) | 176 |
| O1 | 0.85 | 2.03 | 2.861 (3) | 164 |
| O1 | 0.84 | 2.00 | 2.779 (3) | 154 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.85 | 1.90 | 2.757 (3) | 176 |
| O1 | 0.85 | 2.03 | 2.861 (3) | 164 |
| O1 | 0.84 | 2.00 | 2.779 (3) | 154 |
Symmetry codes: (i) ; (ii) .