Literature DB >> 22904920

2-(2-Fluoro-4-hy-droxy-benz-yl)isoindoline-1,3-dione.

Hilal Vesek, Canan Kazak, Ayşen Alaman Ağar, Sümeyye Gümüş, Muhittin Aygün.   

Abstract

In the title compound, C(15)H(10)FNO(3), the dihedral angle between the isoindoline-1,3-dione and 3-fluoro-4-methyl-phenol groups is 86.88 (8)°. The isoindoline-1,3-dione fragment is almost planar, with an r.m.s. deviation of 0.0154 Å within the group. Inter-molecular C-H⋯O hydrogen bonds generate C(6) chains running parallel to the [010] direction.

Entities:  

Year:  2012        PMID: 22904920      PMCID: PMC3414933          DOI: 10.1107/S1600536812029923

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to indoline-1,3-dione and its derivatives, see: Raza et al. (2010 ▶). For discussion of the broad spectrum of properties of these compounds, see: Bhattacharya & Chakrabarti (1998 ▶). For discussion of their anti-inflammatory properties, see: Sridhar & Ramesh (2001 ▶). For discussion of their anxiogenic activities, see: Medvedev et al. (1996 ▶). For related structures, see: Asad et al. (2012 ▶); Fu et al. (2010 ▶). For classification of hydrogen-bonding patterns, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C15H10FNO3 M = 271.24 Monoclinic, a = 12.4362 (7) Å b = 13.8189 (8) Å c = 7.2376 (4) Å β = 105.784 (6)° V = 1196.92 (12) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 296 K 0.49 × 0.36 × 0.16 mm

Data collection

Agilent Xcalibur Eos diffractometer Absorption correction: analytical [CrysAlis PRO (Agilent, 2012 ▶) and Clark & Reid (1995 ▶)] T min = 0.977, T max = 0.995 6558 measured reflections 2475 independent reflections 1455 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.141 S = 1.04 2475 reflections 182 parameters 1 restraint H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812029923/mw2073sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812029923/mw2073Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812029923/mw2073Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H10FNO3F(000) = 560
Mr = 271.24Dx = 1.505 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P2ybcCell parameters from 1089 reflections
a = 12.4362 (7) Åθ = 3.3–29.3°
b = 13.8189 (8) ŵ = 0.12 mm1
c = 7.2376 (4) ÅT = 296 K
β = 105.784 (6)°Plate, yellow
V = 1196.92 (12) Å30.49 × 0.36 × 0.16 mm
Z = 4
Agilent Xcalibur Eos diffractometer2475 independent reflections
Radiation source: Enhance (Mo) X-ray Source1455 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
Detector resolution: 16.1333 pixels mm-1θmax = 26.5°, θmin = 3.3°
ω scansh = −15→15
Absorption correction: analytical [CrysAlis PRO (Agilent, 2012) and Clark & Reid (1995)]k = −10→17
Tmin = 0.977, Tmax = 0.995l = −9→9
6558 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057H-atom parameters constrained
wR(F2) = 0.141w = 1/[σ2(Fo2) + (0.0576P)2 + 0.052P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
2475 reflectionsΔρmax = 0.27 e Å3
182 parametersΔρmin = −0.25 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.015 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.51132 (13)0.39770 (13)0.2014 (2)0.0744 (5)
O10.62844 (14)0.34620 (14)0.8605 (2)0.0669 (6)
H10.60250.33780.95210.100*
O20.14305 (15)0.22946 (14)0.1784 (3)0.0688 (6)
O30.15474 (15)0.55595 (13)0.2472 (2)0.0640 (6)
C10.4371 (2)0.3540 (2)0.7088 (4)0.0587 (7)
H20.42090.34370.82530.070*
C20.3525 (2)0.36576 (18)0.5413 (4)0.0512 (7)
H60.27860.36350.54600.061*
C30.37512 (19)0.38080 (16)0.3672 (3)0.0432 (6)
C40.4864 (2)0.38324 (18)0.3694 (3)0.0489 (6)
C50.5730 (2)0.37230 (18)0.5324 (4)0.0555 (7)
H30.64720.37450.52920.067*
C60.5443 (2)0.35796 (19)0.6992 (4)0.0573 (7)
C70.2863 (2)0.39461 (19)0.1803 (3)0.0513 (7)
H7A0.29880.45600.12440.062*
H7B0.29340.34380.09200.062*
C80.1105 (2)0.31010 (19)0.1968 (4)0.0486 (7)
C90.00117 (19)0.34221 (18)0.2184 (3)0.0443 (6)
C100.00446 (19)0.44188 (18)0.2373 (3)0.0423 (6)
C110.1162 (2)0.47537 (19)0.2301 (3)0.0464 (6)
C12−0.0859 (2)0.4927 (2)0.2606 (3)0.0536 (7)
H12−0.08350.55960.27480.064*
C13−0.1802 (2)0.4405 (2)0.2620 (3)0.0603 (8)
H13−0.24300.47310.27560.072*
C14−0.1837 (2)0.3410 (2)0.2438 (4)0.0602 (8)
H14−0.24840.30790.24600.072*
C15−0.0921 (2)0.2898 (2)0.2221 (4)0.0553 (7)
H15−0.09370.22280.21070.066*
N10.17380 (16)0.39322 (15)0.2016 (3)0.0475 (5)
U11U22U33U12U13U23
F10.0609 (10)0.1071 (14)0.0657 (9)−0.0106 (9)0.0350 (8)−0.0019 (9)
O10.0467 (11)0.0929 (15)0.0528 (9)−0.0076 (10)−0.0006 (7)0.0201 (10)
O20.0605 (13)0.0456 (12)0.1070 (15)0.0039 (10)0.0341 (11)−0.0083 (11)
O30.0674 (13)0.0437 (11)0.0819 (13)−0.0074 (10)0.0220 (10)−0.0014 (10)
C10.0578 (18)0.0648 (18)0.0557 (16)−0.0048 (15)0.0195 (13)0.0081 (14)
C20.0432 (15)0.0527 (16)0.0620 (16)−0.0025 (12)0.0217 (12)0.0039 (13)
C30.0406 (14)0.0352 (13)0.0560 (14)−0.0028 (11)0.0168 (11)−0.0023 (11)
C40.0478 (16)0.0486 (16)0.0568 (15)−0.0043 (13)0.0253 (13)−0.0021 (12)
C50.0404 (15)0.0561 (18)0.0729 (18)−0.0019 (13)0.0201 (14)0.0016 (14)
C60.0463 (16)0.0572 (17)0.0596 (15)−0.0028 (13)−0.0008 (10)0.0059 (14)
C70.0428 (14)0.0555 (16)0.0582 (14)−0.0021 (13)0.0182 (12)0.0023 (13)
C80.0467 (16)0.0416 (16)0.0569 (15)−0.0002 (13)0.0132 (12)−0.0039 (12)
C90.0415 (15)0.0431 (15)0.0461 (13)0.0022 (12)0.0084 (11)−0.0006 (12)
C100.0400 (15)0.0453 (15)0.0389 (12)0.0038 (12)0.0061 (10)−0.0012 (11)
C110.0489 (16)0.0408 (16)0.0465 (13)−0.0005 (13)0.0078 (11)0.0014 (12)
C120.0541 (17)0.0522 (16)0.0524 (14)0.0086 (14)0.0108 (12)−0.0037 (13)
C130.0474 (17)0.075 (2)0.0585 (15)0.0138 (16)0.0148 (13)−0.0021 (15)
C140.0421 (16)0.076 (2)0.0631 (16)−0.0033 (15)0.0163 (13)−0.0001 (15)
C150.0466 (16)0.0528 (16)0.0664 (16)−0.0080 (14)0.0153 (13)−0.0047 (14)
N10.0387 (12)0.0445 (12)0.0589 (12)0.0009 (10)0.0126 (10)−0.0005 (10)
F1—C41.349 (3)C7—H7A0.9700
O1—C61.349 (3)C7—H7B0.9700
O1—H10.8200C8—N11.388 (3)
O2—C81.205 (3)C8—C91.478 (3)
O3—C111.205 (3)C9—C151.374 (3)
C1—C61.354 (4)C9—C101.384 (3)
C1—C21.382 (3)C10—C121.373 (3)
C1—H20.9300C10—C111.479 (3)
C2—C31.379 (3)C11—N11.388 (3)
C2—H60.9300C12—C131.380 (4)
C3—C41.380 (3)C12—H120.9300
C3—C71.508 (3)C13—C141.380 (4)
C4—C51.372 (3)C13—H130.9300
C5—C61.364 (4)C14—C151.385 (4)
C5—H30.9300C14—H140.9300
C7—N11.449 (3)C15—H150.9300
C6—O1—H1109.5O2—C8—C9129.5 (2)
C6—C1—C2118.4 (2)N1—C8—C9106.3 (2)
C6—C1—H2120.8C15—C9—C10121.7 (2)
C2—C1—H2120.8C15—C9—C8130.5 (2)
C3—C2—C1121.5 (2)C10—C9—C8107.8 (2)
C3—C2—H6119.2C12—C10—C9121.2 (2)
C1—C2—H6119.2C12—C10—C11130.7 (2)
C2—C3—C4116.5 (2)C9—C10—C11108.1 (2)
C2—C3—C7123.9 (2)O3—C11—N1124.3 (2)
C4—C3—C7119.6 (2)O3—C11—C10129.6 (2)
F1—C4—C5118.2 (2)N1—C11—C10106.1 (2)
F1—C4—C3118.0 (2)C10—C12—C13117.3 (3)
C5—C4—C3123.9 (2)C10—C12—H12121.3
C6—C5—C4116.3 (2)C13—C12—H12121.3
C6—C5—H3121.8C12—C13—C14121.6 (3)
C4—C5—H3121.8C12—C13—H13119.2
O1—C6—C1119.6 (3)C14—C13—H13119.2
O1—C6—C5117.1 (3)C13—C14—C15120.9 (3)
C1—C6—C5123.3 (2)C13—C14—H14119.5
N1—C7—C3113.3 (2)C15—C14—H14119.5
N1—C7—H7A108.9C9—C15—C14117.2 (3)
C3—C7—H7A108.9C9—C15—H15121.4
N1—C7—H7B108.9C14—C15—H15121.4
C3—C7—H7B108.9C11—N1—C8111.6 (2)
H7A—C7—H7B107.7C11—N1—C7123.9 (2)
O2—C8—N1124.2 (2)C8—N1—C7124.5 (2)
C6—C1—C2—C30.2 (4)C8—C9—C10—C11−0.5 (2)
C1—C2—C3—C40.2 (4)C12—C10—C11—O31.8 (4)
C1—C2—C3—C7−179.6 (2)C9—C10—C11—O3−177.4 (2)
C2—C3—C4—F1179.9 (2)C12—C10—C11—N1−179.3 (2)
C7—C3—C4—F1−0.3 (3)C9—C10—C11—N11.6 (2)
C2—C3—C4—C5−0.4 (4)C9—C10—C12—C13−0.7 (3)
C7—C3—C4—C5179.4 (2)C11—C10—C12—C13−179.8 (2)
F1—C4—C5—C6179.9 (2)C10—C12—C13—C141.0 (3)
C3—C4—C5—C60.2 (4)C12—C13—C14—C15−0.4 (4)
C2—C1—C6—O1−179.6 (2)C10—C9—C15—C140.7 (3)
C2—C1—C6—C5−0.4 (4)C8—C9—C15—C14−179.7 (2)
C4—C5—C6—O1179.4 (2)C13—C14—C15—C9−0.4 (4)
C4—C5—C6—C10.2 (4)O3—C11—N1—C8177.0 (2)
C2—C3—C7—N11.6 (3)C10—C11—N1—C8−2.1 (2)
C4—C3—C7—N1−178.2 (2)O3—C11—N1—C7−2.8 (4)
O2—C8—C9—C15−0.5 (4)C10—C11—N1—C7178.11 (18)
N1—C8—C9—C15179.6 (2)O2—C8—N1—C11−178.1 (2)
O2—C8—C9—C10179.2 (3)C9—C8—N1—C111.8 (3)
N1—C8—C9—C10−0.7 (2)O2—C8—N1—C71.7 (4)
C15—C9—C10—C12−0.1 (3)C9—C8—N1—C7−178.4 (2)
C8—C9—C10—C12−179.79 (19)C3—C7—N1—C1192.4 (3)
C15—C9—C10—C11179.2 (2)C3—C7—N1—C8−87.4 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···F1i0.822.523.267 (2)152
C2—H6···O2ii0.932.513.303 (3)144
C12—H12···O2iii0.932.513.403 (3)161
C15—H15···O3iv0.932.473.346 (3)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯F1i 0.822.523.267 (2)152
C2—H6⋯O2ii 0.932.513.303 (3)144
C12—H12⋯O2iii 0.932.513.403 (3)161
C15—H15⋯O3iv 0.932.473.346 (3)157

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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5.  2-(2-Oxothio-lan-3-yl)isoindoline-1,3-dione.

Authors:  Abdul Rauf Raza; Aisha Saddiqa; M Nawaz Tahir; Sadia Saddiq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-30

6.  2-(2,2,2-Trifluoro-eth-yl)isoindoline-1,3-dione.

Authors:  Xian-Shu Fu; Xiao-Ping Yu; Wei-Min Wang; Fang Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-23

7.  9-(7-Fluoro-4-oxo-4H-chromen-3-yl)-3,3,6,6-tetra-methyl-2,3,4,5,6,7,8,9-octa-hydro-1H-xanthene-1,8-dione.

Authors:  Mohammad Asad; Chuan-Wei Oo; Hasnah Osman; Hoong-Kun Fun; Suhana Arshad
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