| Literature DB >> 22904914 |
Abstract
The two aromatic rings of the title compound, C(11)H(11)N(3)O, are nearly perpendicular to one another, with a dihedral angle between their planes of 80.52 (18)°. In the crystal, the amino N atom is a hydrogen-bond donor to the pyrazine N(1) atom of an inversion-related mol-ecule and the hy-droxy O atom is a hydrogen-bond donor to the pyrazine N(4) atom of another mol-ecule. The two hydrogen bonds lead to the formation of a helical chain that runs along the b axis.Entities:
Year: 2012 PMID: 22904914 PMCID: PMC3414927 DOI: 10.1107/S1600536812031339
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H11N3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3450 reflections |
| θ = 3.0–27.5° | |
| µ = 0.09 mm−1 | |
| β = 95.746 (5)° | Prism, colorless |
| 0.26 × 0.22 × 0.17 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 1751 independent reflections |
| Radiation source: fine-focus sealed tube | 858 reflections with |
| Graphite monochromator | |
| ω scan | θmax = 25.0°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 7686 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1751 reflections | (Δ/σ)max = 0.001 |
| 144 parameters | Δρmax = 0.18 e Å−3 |
| 2 restraints | Δρmin = −0.20 e Å−3 |
| O1 | −0.0468 (3) | 0.63270 (19) | 0.2017 (3) | 0.0656 (8) | |
| N1 | 0.4697 (3) | 0.3661 (2) | 0.0705 (4) | 0.0578 (8) | |
| N2 | 0.2758 (3) | 0.2358 (2) | 0.1926 (4) | 0.0691 (9) | |
| N3 | 0.3227 (3) | 0.5014 (2) | 0.0842 (4) | 0.0654 (9) | |
| C1 | 0.4925 (4) | 0.2662 (3) | 0.0949 (5) | 0.0684 (11) | |
| H1A | 0.5772 | 0.2396 | 0.0707 | 0.082* | |
| C2 | 0.3983 (4) | 0.2013 (3) | 0.1530 (5) | 0.0724 (12) | |
| H2 | 0.4193 | 0.1322 | 0.1654 | 0.087* | |
| C3 | 0.2500 (4) | 0.3333 (3) | 0.1698 (5) | 0.0650 (10) | |
| H3A | 0.1651 | 0.3589 | 0.1953 | 0.078* | |
| C4 | 0.3470 (3) | 0.4010 (3) | 0.1077 (4) | 0.0530 (9) | |
| C5 | 0.1935 (4) | 0.5509 (3) | 0.1131 (5) | 0.0642 (10) | |
| H5A | 0.1176 | 0.5081 | 0.0658 | 0.077* | |
| H5B | 0.1875 | 0.6149 | 0.0508 | 0.077* | |
| C6 | 0.1742 (3) | 0.5727 (2) | 0.2970 (5) | 0.0521 (9) | |
| C7 | 0.2751 (4) | 0.5529 (3) | 0.4289 (5) | 0.0649 (11) | |
| H7 | 0.3577 | 0.5226 | 0.4051 | 0.078* | |
| C8 | 0.2562 (5) | 0.5771 (3) | 0.5957 (6) | 0.0791 (13) | |
| H8 | 0.3241 | 0.5620 | 0.6839 | 0.095* | |
| C9 | 0.1347 (5) | 0.6239 (3) | 0.6285 (5) | 0.0824 (13) | |
| H9 | 0.1218 | 0.6427 | 0.7396 | 0.099* | |
| C10 | 0.0329 (4) | 0.6431 (3) | 0.5000 (5) | 0.0697 (11) | |
| H10 | −0.0494 | 0.6737 | 0.5242 | 0.084* | |
| C11 | 0.0521 (4) | 0.6171 (2) | 0.3347 (5) | 0.0524 (9) | |
| H1 | −0.116 (2) | 0.661 (2) | 0.239 (5) | 0.077 (13)* | |
| H3 | 0.388 (3) | 0.538 (2) | 0.040 (4) | 0.070 (12)* |
| O1 | 0.0572 (17) | 0.0852 (18) | 0.0555 (17) | 0.0224 (13) | 0.0117 (14) | −0.0003 (13) |
| N1 | 0.0494 (18) | 0.0610 (19) | 0.065 (2) | 0.0002 (13) | 0.0146 (15) | 0.0000 (15) |
| N2 | 0.071 (2) | 0.071 (2) | 0.065 (2) | −0.0179 (17) | 0.0064 (19) | 0.0054 (16) |
| N3 | 0.054 (2) | 0.066 (2) | 0.080 (2) | 0.0043 (16) | 0.0281 (18) | 0.0083 (17) |
| C1 | 0.060 (2) | 0.069 (3) | 0.078 (3) | 0.0030 (19) | 0.015 (2) | −0.002 (2) |
| C2 | 0.074 (3) | 0.066 (2) | 0.078 (3) | −0.004 (2) | 0.010 (2) | 0.004 (2) |
| C3 | 0.051 (2) | 0.082 (3) | 0.064 (3) | −0.0058 (19) | 0.017 (2) | 0.004 (2) |
| C4 | 0.046 (2) | 0.066 (2) | 0.048 (2) | −0.0072 (16) | 0.0078 (17) | −0.0019 (17) |
| C5 | 0.054 (2) | 0.077 (2) | 0.064 (3) | 0.0078 (18) | 0.016 (2) | 0.0054 (19) |
| C6 | 0.051 (2) | 0.0549 (19) | 0.051 (2) | −0.0027 (16) | 0.0072 (18) | 0.0043 (16) |
| C7 | 0.055 (2) | 0.071 (2) | 0.068 (3) | −0.0020 (18) | 0.001 (2) | 0.001 (2) |
| C8 | 0.087 (3) | 0.084 (3) | 0.063 (3) | −0.006 (2) | −0.015 (3) | 0.004 (2) |
| C9 | 0.112 (4) | 0.087 (3) | 0.049 (3) | 0.007 (3) | 0.008 (3) | −0.012 (2) |
| C10 | 0.084 (3) | 0.077 (3) | 0.050 (3) | 0.016 (2) | 0.017 (2) | −0.001 (2) |
| C11 | 0.058 (2) | 0.051 (2) | 0.049 (2) | 0.0017 (16) | 0.0087 (19) | 0.0025 (16) |
| O1—C11 | 1.363 (4) | C5—C6 | 1.507 (5) |
| O1—H1 | 0.844 (10) | C5—H5A | 0.9700 |
| N1—C4 | 1.336 (4) | C5—H5B | 0.9700 |
| N1—C1 | 1.337 (4) | C6—C7 | 1.379 (5) |
| N2—C3 | 1.311 (4) | C6—C11 | 1.379 (5) |
| N2—C2 | 1.337 (4) | C7—C8 | 1.382 (5) |
| N3—C4 | 1.345 (4) | C7—H7 | 0.9300 |
| N3—C5 | 1.449 (4) | C8—C9 | 1.375 (6) |
| N3—H3 | 0.888 (10) | C8—H8 | 0.9300 |
| C1—C2 | 1.361 (5) | C9—C10 | 1.365 (5) |
| C1—H1A | 0.9300 | C9—H9 | 0.9300 |
| C2—H2 | 0.9300 | C10—C11 | 1.377 (5) |
| C3—C4 | 1.415 (5) | C10—H10 | 0.9300 |
| C3—H3A | 0.9300 | ||
| C11—O1—H1 | 109 (3) | N3—C5—H5B | 108.4 |
| C4—N1—C1 | 116.2 (3) | C6—C5—H5B | 108.4 |
| C3—N2—C2 | 117.3 (3) | H5A—C5—H5B | 107.5 |
| C4—N3—C5 | 123.9 (3) | C7—C6—C11 | 118.5 (3) |
| C4—N3—H3 | 117 (2) | C7—C6—C5 | 122.8 (3) |
| C5—N3—H3 | 119 (2) | C11—C6—C5 | 118.6 (3) |
| N1—C1—C2 | 123.6 (3) | C6—C7—C8 | 121.4 (4) |
| N1—C1—H1A | 118.2 | C6—C7—H7 | 119.3 |
| C2—C1—H1A | 118.2 | C8—C7—H7 | 119.3 |
| N2—C2—C1 | 120.7 (4) | C9—C8—C7 | 118.6 (4) |
| N2—C2—H2 | 119.7 | C9—C8—H8 | 120.7 |
| C1—C2—H2 | 119.7 | C7—C8—H8 | 120.7 |
| N2—C3—C4 | 122.3 (3) | C10—C9—C8 | 120.9 (4) |
| N2—C3—H3A | 118.9 | C10—C9—H9 | 119.6 |
| C4—C3—H3A | 118.9 | C8—C9—H9 | 119.6 |
| N1—C4—N3 | 116.9 (3) | C9—C10—C11 | 120.0 (4) |
| N1—C4—C3 | 120.0 (3) | C9—C10—H10 | 120.0 |
| N3—C4—C3 | 123.2 (3) | C11—C10—H10 | 120.0 |
| N3—C5—C6 | 115.4 (3) | O1—C11—C10 | 122.6 (3) |
| N3—C5—H5A | 108.4 | O1—C11—C6 | 116.8 (3) |
| C6—C5—H5A | 108.4 | C10—C11—C6 | 120.5 (4) |
| C4—N1—C1—C2 | 0.4 (6) | N3—C5—C6—C11 | −178.2 (3) |
| C3—N2—C2—C1 | 1.3 (6) | C11—C6—C7—C8 | −0.4 (5) |
| N1—C1—C2—N2 | −1.2 (7) | C5—C6—C7—C8 | 177.7 (3) |
| C2—N2—C3—C4 | −0.7 (6) | C6—C7—C8—C9 | −1.4 (6) |
| C1—N1—C4—N3 | 179.9 (3) | C7—C8—C9—C10 | 2.2 (6) |
| C1—N1—C4—C3 | 0.2 (5) | C8—C9—C10—C11 | −1.2 (6) |
| C5—N3—C4—N1 | 177.9 (3) | C9—C10—C11—O1 | 178.8 (3) |
| C5—N3—C4—C3 | −2.5 (6) | C9—C10—C11—C6 | −0.7 (6) |
| N2—C3—C4—N1 | −0.1 (6) | C7—C6—C11—O1 | −178.0 (3) |
| N2—C3—C4—N3 | −179.7 (4) | C5—C6—C11—O1 | 3.8 (4) |
| C4—N3—C5—C6 | 78.5 (5) | C7—C6—C11—C10 | 1.4 (5) |
| N3—C5—C6—C7 | 3.7 (5) | C5—C6—C11—C10 | −176.7 (3) |
| H··· | ||||
| O1—H1···N2i | 0.84 (1) | 1.96 (1) | 2.796 (4) | 174 (4) |
| N3—H3···N1ii | 0.89 (1) | 2.12 (1) | 3.007 (4) | 175 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N2i | 0.84 (1) | 1.96 (1) | 2.796 (4) | 174 (4) |
| N3—H3⋯N1ii | 0.89 (1) | 2.12 (1) | 3.007 (4) | 175 (3) |
Symmetry codes: (i) ; (ii) .