Literature DB >> 22904888

N-(2,4,6-Trimethyl-phen-yl)-1,3-thia-zol-2-amine.

Ayesha Babar, Munawar Ali Munawar, M Nawaz Tahir, Ather Farooq Khan, Muhammad Ilyas Tariq.   

Abstract

In the title compound, C(12)H(14)N(2)S, the dihedral angle between the 1,3,5-trimethyl-benzene and 1,3-thia-zol-2-amine groups is 73.15 (4)°. In the crystal, inversion dimers linked by pairs of N-H⋯N hydrogen bonds generate R(2) (2)(8) loops.

Entities:  

Year:  2012        PMID: 22904888      PMCID: PMC3414355          DOI: 10.1107/S1600536812031315

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological activities of thia­zoles, see: Wilson et al. (2001 ▶). For a related crystal structure, see: Caranoni & Capella (1982 ▶).

Experimental

Crystal data

C12H14N2S M = 218.31 Monoclinic, a = 14.2766 (6) Å b = 7.0676 (2) Å c = 13.8598 (6) Å β = 118.736 (2)° V = 1226.24 (9) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 296 K 0.32 × 0.22 × 0.18 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.929, T max = 0.959 10086 measured reflections 2717 independent reflections 2196 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.116 S = 1.05 2717 reflections 140 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812031315/hb6896sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031315/hb6896Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812031315/hb6896Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H14N2SF(000) = 464
Mr = 218.31Dx = 1.183 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2196 reflections
a = 14.2766 (6) Åθ = 1.6–27.3°
b = 7.0676 (2) ŵ = 0.23 mm1
c = 13.8598 (6) ÅT = 296 K
β = 118.736 (2)°Prism, yellow
V = 1226.24 (9) Å30.32 × 0.22 × 0.18 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer2717 independent reflections
Radiation source: fine-focus sealed tube2196 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
Detector resolution: 7.80 pixels mm-1θmax = 27.3°, θmin = 1.6°
ω scansh = −18→18
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −8→9
Tmin = 0.929, Tmax = 0.959l = −17→17
10086 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H-atom parameters constrained
wR(F2) = 0.116w = 1/[σ2(Fo2) + (0.0574P)2 + 0.3377P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2717 reflectionsΔρmax = 0.30 e Å3
140 parametersΔρmin = −0.24 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.049 (4)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.28549 (3)0.60626 (7)0.20694 (3)0.0510 (2)
N10.37642 (11)0.6678 (2)0.42680 (11)0.0489 (4)
N20.46689 (11)0.4830 (2)0.35713 (11)0.0457 (4)
C10.28129 (12)0.7598 (2)0.41025 (12)0.0417 (5)
C20.25718 (15)0.9401 (3)0.36248 (14)0.0503 (5)
C30.16150 (17)1.0218 (3)0.34372 (15)0.0619 (7)
C40.09327 (16)0.9380 (3)0.37534 (15)0.0640 (7)
C50.12224 (14)0.7638 (3)0.42681 (14)0.0579 (6)
C60.21467 (13)0.6720 (2)0.44421 (12)0.0464 (5)
C70.24324 (19)0.4809 (3)0.49949 (19)0.0689 (8)
C80.3330 (2)1.0470 (3)0.3358 (2)0.0774 (9)
C9−0.0095 (2)1.0332 (5)0.3547 (2)0.1073 (13)
C100.38520 (12)0.5850 (2)0.34340 (12)0.0385 (4)
C110.36100 (15)0.4680 (3)0.16835 (14)0.0522 (6)
C120.45154 (15)0.4168 (3)0.25688 (14)0.0499 (6)
H10.430210.664510.492000.0586*
H30.142551.138320.308250.0742*
H50.078210.706560.450480.0694*
H7A0.184600.433990.508120.1034*
H7B0.305330.492710.570440.1034*
H7C0.257970.394420.455050.1034*
H8A0.317271.179800.331410.1162*
H8B0.324951.004120.266510.1162*
H8C0.405021.025360.392460.1162*
H9A−0.058171.035670.277110.1608*
H9B0.005331.160260.382500.1608*
H9C−0.041050.963990.391500.1608*
H110.341590.433780.096360.0626*
H120.501760.340470.251280.0599*
U11U22U33U12U13U23
S10.0449 (3)0.0634 (3)0.0357 (2)0.0060 (2)0.0122 (2)0.0011 (2)
N10.0442 (7)0.0644 (9)0.0332 (6)0.0155 (7)0.0148 (5)0.0007 (6)
N20.0449 (7)0.0542 (8)0.0398 (7)0.0100 (6)0.0217 (6)0.0047 (6)
C10.0410 (8)0.0480 (9)0.0323 (7)0.0071 (7)0.0147 (6)−0.0023 (6)
C20.0594 (10)0.0491 (9)0.0441 (9)0.0067 (8)0.0263 (8)0.0009 (7)
C30.0747 (13)0.0597 (11)0.0479 (10)0.0267 (10)0.0268 (9)0.0082 (8)
C40.0539 (10)0.0921 (15)0.0403 (9)0.0287 (10)0.0182 (8)0.0018 (9)
C50.0448 (9)0.0857 (14)0.0432 (9)0.0020 (9)0.0212 (7)−0.0026 (9)
C60.0481 (9)0.0532 (9)0.0347 (7)0.0004 (7)0.0174 (7)−0.0039 (7)
C70.0830 (14)0.0585 (12)0.0719 (13)−0.0024 (10)0.0425 (12)0.0080 (10)
C80.0980 (17)0.0590 (12)0.0915 (17)−0.0005 (12)0.0585 (15)0.0086 (11)
C90.0779 (16)0.166 (3)0.0768 (16)0.0672 (19)0.0362 (13)0.0210 (17)
C100.0377 (7)0.0420 (8)0.0340 (7)0.0021 (6)0.0158 (6)0.0044 (6)
C110.0656 (11)0.0535 (10)0.0407 (8)−0.0042 (8)0.0282 (8)−0.0051 (7)
C120.0594 (10)0.0505 (10)0.0500 (9)0.0078 (8)0.0344 (8)0.0015 (7)
S1—C101.7428 (15)C6—C71.509 (3)
S1—C111.720 (2)C11—C121.335 (3)
N1—C11.421 (2)C3—H30.9300
N1—C101.354 (2)C5—H50.9300
N2—C101.305 (2)C7—H7A0.9600
N2—C121.380 (2)C7—H7B0.9600
N1—H10.8600C7—H7C0.9600
C1—C61.393 (3)C8—H8A0.9600
C1—C21.401 (2)C8—H8B0.9600
C2—C31.388 (3)C8—H8C0.9600
C2—C81.505 (4)C9—H9A0.9600
C3—C41.379 (3)C9—H9B0.9600
C4—C51.383 (3)C9—H9C0.9600
C4—C91.511 (4)C11—H110.9300
C5—C61.384 (3)C12—H120.9300
C10—S1—C1188.94 (8)C4—C3—H3119.00
C1—N1—C10122.23 (14)C4—C5—H5119.00
C10—N2—C12110.02 (15)C6—C5—H5119.00
C1—N1—H1119.00C6—C7—H7A109.00
C10—N1—H1119.00C6—C7—H7B109.00
N1—C1—C2119.41 (17)C6—C7—H7C109.00
N1—C1—C6119.75 (13)H7A—C7—H7B109.00
C2—C1—C6120.82 (17)H7A—C7—H7C109.00
C1—C2—C3117.6 (2)H7B—C7—H7C109.00
C3—C2—C8120.31 (19)C2—C8—H8A109.00
C1—C2—C8122.1 (2)C2—C8—H8B109.00
C2—C3—C4122.9 (2)C2—C8—H8C109.00
C3—C4—C9121.2 (2)H8A—C8—H8B109.00
C3—C4—C5117.7 (2)H8A—C8—H8C109.00
C5—C4—C9121.1 (2)H8B—C8—H8C110.00
C4—C5—C6122.1 (2)C4—C9—H9A110.00
C1—C6—C5118.75 (15)C4—C9—H9B110.00
C5—C6—C7120.70 (19)C4—C9—H9C109.00
C1—C6—C7120.55 (18)H9A—C9—H9B110.00
S1—C10—N2114.35 (12)H9A—C9—H9C109.00
S1—C10—N1121.78 (13)H9B—C9—H9C109.00
N1—C10—N2123.87 (14)S1—C11—H11125.00
S1—C11—C12110.05 (14)C12—C11—H11125.00
N2—C12—C11116.6 (2)N2—C12—H12122.00
C2—C3—H3119.00C11—C12—H12122.00
C11—S1—C10—N1−179.66 (15)N1—C1—C6—C5−179.71 (14)
C11—S1—C10—N2−0.05 (14)N1—C1—C6—C70.6 (2)
C10—S1—C11—C120.38 (17)C2—C1—C6—C52.0 (2)
C10—N1—C1—C2−76.7 (2)C2—C1—C6—C7−177.69 (16)
C10—N1—C1—C6104.96 (18)C1—C2—C3—C43.6 (3)
C1—N1—C10—S16.9 (2)C8—C2—C3—C4−174.12 (19)
C1—N1—C10—N2−172.72 (16)C2—C3—C4—C5−0.8 (3)
C12—N2—C10—S1−0.29 (19)C2—C3—C4—C9179.1 (2)
C12—N2—C10—N1179.31 (17)C3—C4—C5—C6−1.7 (3)
C10—N2—C12—C110.6 (3)C9—C4—C5—C6178.44 (18)
N1—C1—C2—C3177.48 (15)C4—C5—C6—C11.1 (3)
N1—C1—C2—C8−4.8 (2)C4—C5—C6—C7−179.29 (18)
C6—C1—C2—C3−4.2 (2)S1—C11—C12—N2−0.7 (3)
C6—C1—C2—C8173.51 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.862.162.944 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯N2i 0.862.162.944 (2)151

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis of thiophene-2-carboxamidines containing 2-aminothiazoles and their biological evaluation as urokinase inhibitors.

Authors:  K J Wilson; C R Illig; N Subasinghe; J B Hoffman; M J Rudolph; R Soll; C J Molloy; R Bone; D Green; T Randall; M Zhang; F A Lewandowski; Z Zhou; C Sharp; D Maguire; B Grasberger; R L DesJarlais; J Spurlino
Journal:  Bioorg Med Chem Lett       Date:  2001-04-09       Impact factor: 2.823

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
  1 in total

1.  N-(2,4-Dichloro-phen-yl)-1,3-thia-zol-2-amine.

Authors:  Ayesha Babar; Munawar Ali Munawar; M Nawaz Tahir; Fateh Ullah; Muhammad Ilyas Tariq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-15
  1 in total

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