Literature DB >> 22969593

N-(2,4-Dichloro-phen-yl)-1,3-thia-zol-2-amine.

Ayesha Babar, Munawar Ali Munawar, M Nawaz Tahir, Fateh Ullah, Muhammad Ilyas Tariq.   

Abstract

In the title mol-ecule, C(9)H(6)Cl(2)N(2)S, the mean planes of the benzene and thia-zole rings make a dihedral angle of 54.18 (8)°. In the crystal, mol-ecules are joined into dimers with an R(2) (2)(8) ring motif by pairs of N-H⋯N hydrogen bonds. These dimers are linked by C-H⋯Cl inter-actions into layers parallel to (011). The thia-zole rings form columns along the c-axis direction, with a centroid-centroid separation of 3.8581 (9) Å, indicating π-π inter-actions. An intra-molecular C-H⋯S contact also occurs.

Entities:  

Year:  2012        PMID: 22969593      PMCID: PMC3435722          DOI: 10.1107/S1600536812035301

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and crystal structure of a related compound, see: Babar et al. (2012 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C9H6Cl2N2S M = 245.12 Monoclinic, a = 13.0270 (9) Å b = 10.1183 (6) Å c = 7.7159 (5) Å β = 91.974 (3)° V = 1016.44 (11) Å3 Z = 4 Mo Kα radiation μ = 0.80 mm−1 T = 296 K 0.33 × 0.28 × 0.22 mm

Data collection

Bruker Kappa APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.778, T max = 0.844 8039 measured reflections 2245 independent reflections 1957 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.080 S = 1.04 2245 reflections 127 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812035301/yk2069sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035301/yk2069Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812035301/yk2069Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H6Cl2N2SF(000) = 496
Mr = 245.12Dx = 1.602 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 912 reflections
a = 13.0270 (9) Åθ = 1.6–27.2°
b = 10.1183 (6) ŵ = 0.80 mm1
c = 7.7159 (5) ÅT = 296 K
β = 91.974 (3)°Prism, yellow
V = 1016.44 (11) Å30.33 × 0.28 × 0.22 mm
Z = 4
Bruker Kappa APEXII CCD area-detector diffractometer2245 independent reflections
Radiation source: fine-focus sealed tube1957 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
Detector resolution: 7.80 pixels mm-1θmax = 27.2°, θmin = 1.6°
ω scansh = −16→16
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −12→12
Tmin = 0.778, Tmax = 0.844l = −9→9
8039 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0406P)2 + 0.2925P] where P = (Fo2 + 2Fc2)/3
2245 reflections(Δ/σ)max < 0.001
127 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.24571 (4)0.37457 (5)0.29544 (6)0.0545 (2)
Cl2−0.05984 (3)0.34681 (6)0.74042 (8)0.0662 (2)
S10.33053 (3)0.77775 (4)0.66934 (5)0.0405 (1)
N10.35990 (10)0.51946 (12)0.57795 (18)0.0403 (4)
N20.49723 (10)0.66580 (13)0.57830 (18)0.0400 (4)
C10.26014 (11)0.48156 (14)0.6171 (2)0.0353 (4)
C20.19932 (12)0.41107 (15)0.4977 (2)0.0369 (4)
C30.10147 (12)0.36979 (16)0.5348 (2)0.0434 (5)
C40.06296 (12)0.40070 (17)0.6935 (2)0.0451 (5)
C50.12029 (14)0.47052 (18)0.8147 (2)0.0505 (6)
C60.21843 (14)0.50928 (18)0.7763 (2)0.0463 (5)
C70.40145 (11)0.64084 (14)0.60680 (18)0.0326 (4)
C80.43848 (14)0.87355 (15)0.6496 (2)0.0455 (5)
C90.51714 (14)0.79861 (16)0.6017 (2)0.0462 (5)
H10.398180.460920.531650.0483*
H30.062250.321850.453840.0520*
H50.093310.491420.921300.0606*
H60.257720.555210.859260.0556*
H80.441700.964150.669330.0545*
H90.581880.834170.585030.0554*
U11U22U33U12U13U23
Cl10.0514 (3)0.0636 (3)0.0487 (3)−0.0090 (2)0.0058 (2)−0.0158 (2)
Cl20.0351 (2)0.0737 (3)0.0905 (4)−0.0031 (2)0.0114 (2)0.0243 (3)
S10.0421 (2)0.0346 (2)0.0453 (2)0.0064 (2)0.0081 (2)−0.0047 (2)
N10.0325 (7)0.0334 (6)0.0554 (8)−0.0019 (5)0.0082 (6)−0.0134 (6)
N20.0350 (7)0.0333 (6)0.0519 (8)−0.0022 (5)0.0059 (6)−0.0070 (6)
C10.0319 (7)0.0302 (7)0.0438 (8)0.0008 (6)0.0034 (6)−0.0011 (6)
C20.0365 (8)0.0338 (7)0.0405 (8)0.0009 (6)0.0019 (6)−0.0005 (6)
C30.0351 (8)0.0396 (8)0.0550 (10)−0.0030 (6)−0.0047 (7)0.0039 (7)
C40.0319 (8)0.0420 (9)0.0619 (11)0.0019 (7)0.0075 (7)0.0141 (8)
C50.0470 (10)0.0526 (10)0.0530 (10)0.0006 (8)0.0170 (8)−0.0013 (8)
C60.0454 (9)0.0480 (9)0.0458 (9)−0.0049 (7)0.0059 (7)−0.0078 (7)
C70.0342 (8)0.0313 (7)0.0325 (7)0.0025 (6)0.0021 (6)−0.0045 (5)
C80.0567 (10)0.0289 (7)0.0511 (9)−0.0023 (7)0.0071 (8)−0.0040 (7)
C90.0449 (9)0.0357 (8)0.0583 (10)−0.0084 (7)0.0080 (8)−0.0052 (7)
Cl1—C21.7327 (16)C2—C31.381 (2)
Cl2—C41.7399 (16)C3—C41.375 (2)
S1—C71.7425 (15)C4—C51.372 (2)
S1—C81.7191 (18)C5—C61.379 (3)
N1—C11.3979 (19)C8—C91.337 (2)
N1—C71.3574 (19)C3—H30.9300
N2—C71.2992 (19)C5—H50.9300
N2—C91.379 (2)C6—H60.9300
N1—H10.8600C8—H80.9300
C1—C61.389 (2)C9—H90.9300
C1—C21.391 (2)
C7—S1—C888.89 (7)C1—C6—C5121.76 (15)
C1—N1—C7125.53 (13)S1—C7—N2114.44 (11)
C7—N2—C9110.16 (13)S1—C7—N1123.54 (11)
C7—N1—H1117.00N1—C7—N2121.87 (13)
C1—N1—H1117.00S1—C8—C9109.99 (12)
N1—C1—C6122.05 (14)N2—C9—C8116.50 (16)
N1—C1—C2120.67 (14)C2—C3—H3121.00
C2—C1—C6117.26 (14)C4—C3—H3121.00
C1—C2—C3121.78 (14)C4—C5—H5120.00
Cl1—C2—C3118.39 (12)C6—C5—H5120.00
Cl1—C2—C1119.83 (12)C1—C6—H6119.00
C2—C3—C4118.92 (15)C5—C6—H6119.00
C3—C4—C5121.14 (15)S1—C8—H8125.00
Cl2—C4—C3118.70 (12)C9—C8—H8125.00
Cl2—C4—C5120.15 (13)N2—C9—H9122.00
C4—C5—C6119.13 (15)C8—C9—H9122.00
C8—S1—C7—N1−174.25 (13)C6—C1—C2—Cl1179.25 (12)
C8—S1—C7—N21.39 (12)C6—C1—C2—C3−0.1 (2)
C7—S1—C8—C9−0.80 (12)N1—C1—C6—C5−179.38 (15)
C7—N1—C1—C2134.53 (16)C2—C1—C6—C5−0.9 (2)
C7—N1—C1—C6−47.0 (2)Cl1—C2—C3—C4−178.59 (13)
C1—N1—C7—S1−9.7 (2)C1—C2—C3—C40.8 (2)
C1—N1—C7—N2174.96 (14)C2—C3—C4—Cl2−179.29 (12)
C9—N2—C7—S1−1.53 (17)C2—C3—C4—C5−0.5 (3)
C9—N2—C7—N1174.19 (14)Cl2—C4—C5—C6178.34 (14)
C7—N2—C9—C80.9 (2)C3—C4—C5—C6−0.5 (3)
N1—C1—C2—Cl1−2.2 (2)C4—C5—C6—C11.2 (3)
N1—C1—C2—C3178.44 (14)S1—C8—C9—N20.13 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.862.072.9302 (19)174
C3—H3···Cl2ii0.932.823.7483 (17)173
C6—H6···S10.932.873.2056 (19)103
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯N2i 0.862.072.9302 (19)174
C3—H3⋯Cl2ii 0.932.823.7483 (17)173
C6—H6⋯S10.932.873.2056 (19)103

Symmetry codes: (i) ; (ii) .

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