Literature DB >> 22904700

Dilithium disodium nickel(II) cyclo-hexa-phosphate dodeca-hydrate, Li(2)Na(2)NiP(6)O(18)·12H(2)O.

Sonia Abid, Salem S Al-Deyab, Mohamed Rzaigui.   

Abstract

The crystal structure of Li(2)Na(2)NiP(6)O(18)·12H(2)O is characterized by the presence of six-membered P(6)O(18) (6-) phosphate ring anions (inter-nal symmetry -1) having a chair conformation and three different cations, viz. Li(+), Na(+) and Ni(2+), to counterbalance the anionic charge. All atoms are in general positions except for nickel, which lies on a special position with site symmetry 2. Lithium has a tetra-hedral environment (LiO(4)), and sodium and nickel have octa-hedral environments [NaO(6) and Ni(H(2)O)(6), respectively]. The P(6)O(18) rings are linked via corner sharing by NaO(6) octa-hedra and LiO(4) tetra-hedra to form a three-dimensional framework presenting tunnels running along [010] in which the six-coordinated Ni(2+) cations are located. The structure is stabilized by a network of O-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22904700      PMCID: PMC3414093          DOI: 10.1107/S1600536812029960

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal chemistry of cyclic phosphates, see: Averbuch-Pouchot & Durif (1996 ▶). For related structures containing cyclo­hexa­phosphate rings, see: Abid et al. (2011 ▶); Amri et al. (2009 ▶); Marouani et al. (2010 ▶). For hydrogen bonding, see: Blessing (1986 ▶). For the synthesis, see: Schülke & Kayser (1985 ▶).

Experimental

Crystal data

Li2Na2NiP6O18·12H2O M = 808.58 Monoclinic, a = 17.728 (9) Å b = 10.213 (2) Å c = 14.801 (7) Å β = 112.04 (4)° V = 2484.0 (18) Å3 Z = 4 Ag Kα radiation λ = 0.56085 Å μ = 0.69 mm−1 T = 298 K 0.40 × 0.35 × 0.30 mm

Data collection

Nonius MACH-3 diffractometer Absorption correction: part of the refinement model (ΔF) (Walker & Stuart, 1983 ▶) T min = 0.769, T max = 0.819 7168 measured reflections 6076 independent reflections 4296 reflections with I > 2σ(I) R int = 0.035 2 standard reflections every 120 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.102 S = 1.07 6076 reflections 186 parameters 2 restraints H-atom parameters constrained Δρmax = 0.80 e Å−3 Δρmin = −0.61 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812029960/ff2073sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812029960/ff2073Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Li2Na2NiP6O18·12H2OF(000) = 1640
Mr = 808.58Dx = 2.162 Mg m3
Monoclinic, C2/cAg Kα radiation, λ = 0.56085 Å
Hall symbol: -C 2ycCell parameters from 25 reflections
a = 17.728 (9) Åθ = 8.3–10.8°
b = 10.213 (2) ŵ = 0.69 mm1
c = 14.801 (7) ÅT = 298 K
β = 112.04 (4)°Prism, green
V = 2484.0 (18) Å30.40 × 0.35 × 0.30 mm
Z = 4
Nonius MACH-3 diffractometer4296 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
Graphite monochromatorθmax = 28.0°, θmin = 2.3°
non–profiled ω scansh = −29→27
Absorption correction: part of the refinement model (ΔF) (Walker & Stuart, 1983)k = −1→17
Tmin = 0.769, Tmax = 0.819l = −1→24
7168 measured reflections2 standard reflections every 120 min
6076 independent reflections intensity decay: 2%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0389P)2 + 4.028P] where P = (Fo2 + 2Fc2)/3
6076 reflections(Δ/σ)max = 0.003
186 parametersΔρmax = 0.80 e Å3
2 restraintsΔρmin = −0.61 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Na10.38942 (6)0.74638 (9)0.40089 (7)0.02302 (18)
Li0.2602 (3)0.4883 (4)0.2527 (3)0.0258 (8)
O80.28521 (9)0.47433 (15)0.13696 (11)0.0182 (3)
O90.16879 (9)0.61570 (15)0.04655 (11)0.0209 (3)
O100.14882 (10)0.42811 (17)0.22717 (13)0.0249 (3)
H1100.11340.48750.20210.030*
H2100.13890.40150.27720.030*
O110.25138 (10)0.67633 (16)0.27740 (13)0.0260 (3)
H1110.21340.68240.29620.031*
H2110.24140.72910.22870.031*
O120.42660 (15)0.6531 (2)0.28051 (17)0.0437 (5)
H1120.47750.67250.30120.052*
H2120.40650.67620.22050.052*
P10.15702 (3)0.94221 (5)0.03614 (4)0.01251 (9)
P30.21812 (3)0.48781 (5)0.04013 (4)0.01248 (9)
P20.09260 (3)0.68397 (5)−0.03712 (4)0.01298 (9)
O40.07807 (9)0.62089 (15)−0.13208 (11)0.0196 (3)
O20.16821 (9)0.89346 (15)0.13535 (10)0.0177 (3)
O70.16162 (10)0.37702 (15)0.00214 (12)0.0216 (3)
O50.02574 (9)0.69398 (17)−0.00121 (12)0.0227 (3)
O60.24650 (8)0.97174 (17)0.04034 (11)0.0208 (3)
O10.10493 (10)1.05743 (15)−0.00194 (12)0.0243 (3)
O30.12913 (10)0.82657 (15)−0.04140 (11)0.0216 (3)
Ni10.50000.24488 (3)0.25000.01249 (7)
O150.48362 (9)0.09969 (14)0.33724 (11)0.0172 (3)
H1150.51840.03490.35020.021*
H2150.48380.12710.39020.021*
O140.37693 (8)0.24893 (14)0.16516 (11)0.0172 (3)
H1140.35690.32560.15400.021*
H2140.36160.21210.10870.021*
O130.47785 (9)0.38693 (15)0.33445 (11)0.0197 (3)
H1130.43550.37600.34540.024*
H2130.51620.40890.38600.024*
U11U22U33U12U13U23
Na10.0231 (4)0.0223 (4)0.0243 (4)−0.0004 (3)0.0097 (3)−0.0018 (4)
Li0.0293 (19)0.029 (2)0.0183 (18)0.0059 (17)0.0085 (15)0.0022 (16)
O80.0169 (6)0.0231 (7)0.0128 (6)0.0045 (5)0.0036 (5)0.0027 (5)
O90.0216 (6)0.0225 (7)0.0143 (6)0.0095 (5)0.0019 (5)−0.0022 (6)
O100.0241 (7)0.0267 (8)0.0248 (8)0.0044 (6)0.0104 (6)0.0044 (7)
O110.0289 (8)0.0247 (7)0.0284 (9)−0.0001 (6)0.0155 (7)0.0001 (7)
O120.0520 (13)0.0494 (12)0.0371 (11)0.0085 (10)0.0251 (10)0.0033 (10)
P10.01273 (18)0.01321 (18)0.0114 (2)−0.00086 (15)0.00431 (15)0.00013 (16)
P30.01266 (18)0.01344 (19)0.0114 (2)−0.00034 (15)0.00457 (15)0.00006 (16)
P20.01426 (19)0.01291 (18)0.0112 (2)−0.00007 (15)0.00409 (16)−0.00088 (16)
O40.0237 (7)0.0195 (6)0.0145 (6)−0.0021 (5)0.0059 (5)−0.0057 (5)
O20.0196 (6)0.0219 (6)0.0131 (6)−0.0040 (5)0.0078 (5)0.0001 (5)
O70.0271 (7)0.0190 (6)0.0192 (7)−0.0097 (6)0.0094 (6)−0.0030 (6)
O50.0182 (6)0.0324 (8)0.0196 (7)0.0028 (6)0.0096 (6)0.0047 (6)
O60.0143 (5)0.0354 (8)0.0134 (6)−0.0041 (6)0.0061 (5)0.0029 (6)
O10.0257 (7)0.0206 (7)0.0226 (8)0.0085 (6)0.0045 (6)0.0000 (6)
O30.0344 (8)0.0162 (6)0.0148 (6)−0.0090 (6)0.0100 (6)−0.0035 (5)
Ni10.01256 (13)0.01290 (14)0.01169 (14)0.0000.00419 (11)0.000
O150.0206 (6)0.0162 (6)0.0149 (6)0.0014 (5)0.0069 (5)0.0012 (5)
O140.0160 (5)0.0176 (6)0.0159 (6)0.0017 (5)0.0035 (5)−0.0010 (5)
O130.0193 (6)0.0220 (7)0.0186 (7)−0.0005 (5)0.0080 (5)−0.0051 (6)
Na1—O1i2.4205 (19)P3—O71.4754 (16)
Na1—O5ii2.384 (2)P3—O6iv1.5948 (17)
Na1—O7iii2.3737 (19)P2—O51.4735 (17)
Na1—O10iii2.556 (2)P2—O41.4782 (17)
Na1—O112.546 (2)P2—O31.6047 (16)
Na1—O122.323 (2)O2—Liiii1.927 (4)
Li—O2i1.927 (4)O7—Na1i2.3737 (19)
Li—O81.930 (5)O5—Na1v2.384 (2)
Li—O101.964 (5)O6—P3iv1.5948 (17)
Li—O111.972 (5)O1—Na1iii2.4205 (19)
O8—P31.4860 (17)Ni1—O132.0469 (16)
O9—P31.5944 (16)Ni1—O13vi2.0469 (16)
O9—P21.6088 (17)Ni1—O15vi2.0572 (15)
P1—O11.4712 (16)Ni1—O152.0572 (15)
P1—O21.4917 (17)Ni1—O14vi2.0693 (18)
P1—O31.5908 (16)Ni1—O142.0693 (18)
P1—O61.5929 (17)
O12—Na1—O7iii167.54 (8)O7—P3—O9110.00 (10)
O12—Na1—O5ii93.23 (9)O8—P3—O9106.07 (9)
O7iii—Na1—O5ii91.05 (7)O7—P3—O6iv108.36 (9)
O12—Na1—O1i100.91 (8)O8—P3—O6iv110.34 (9)
O7iii—Na1—O1i90.64 (7)O9—P3—O6iv102.15 (9)
O5ii—Na1—O1i91.76 (7)O5—P2—O4119.77 (10)
O12—Na1—O1178.89 (9)O5—P2—O3110.02 (10)
O7iii—Na1—O1196.33 (7)O4—P2—O3106.67 (9)
O5ii—Na1—O11171.92 (7)O5—P2—O9108.00 (10)
O1i—Na1—O1191.45 (7)O4—P2—O9109.84 (9)
O12—Na1—O10iii78.55 (8)O3—P2—O9100.90 (9)
O7iii—Na1—O10iii89.14 (7)P1—O2—Liiii118.66 (16)
O5ii—Na1—O10iii101.04 (7)P3—O7—Na1i123.98 (10)
O1i—Na1—O10iii167.20 (7)P2—O5—Na1v124.59 (10)
O11—Na1—O10iii75.86 (7)P1—O6—P3iv133.24 (10)
O2i—Li—O8115.4 (2)P1—O1—Na1iii121.77 (10)
O2i—Li—O10107.4 (2)P1—O3—P2131.77 (10)
O8—Li—O10110.8 (2)O13—Ni1—O13vi89.73 (9)
O2i—Li—O11113.7 (2)O13—Ni1—O15vi177.22 (6)
O8—Li—O11107.3 (2)O13vi—Ni1—O15vi91.32 (7)
O10—Li—O11101.3 (2)O13—Ni1—O1591.32 (7)
P3—O8—Li118.83 (15)O13vi—Ni1—O15177.22 (6)
P3—O9—P2129.04 (10)O15vi—Ni1—O1587.76 (9)
Li—O10—Na1i109.74 (15)O13—Ni1—O14vi90.89 (7)
Li—O11—Na1106.55 (15)O13vi—Ni1—O14vi87.49 (7)
O1—P1—O2118.46 (10)O15vi—Ni1—O14vi91.73 (6)
O1—P1—O3109.69 (10)O15—Ni1—O14vi89.92 (6)
O2—P1—O3110.66 (9)O13—Ni1—O1487.49 (7)
O1—P1—O6109.65 (10)O13vi—Ni1—O1490.89 (7)
O2—P1—O6105.21 (9)O15vi—Ni1—O1489.92 (6)
O3—P1—O6101.78 (9)O15—Ni1—O1491.73 (6)
O7—P3—O8118.66 (10)O14vi—Ni1—O14177.71 (8)
D—H···AD—HH···AD···AD—H···A
O10—H110···O15iii0.851.962.795 (3)165
O10—H210···O4vii0.872.032.851 (3)159
O11—H111···O14iii0.822.012.811 (3)164
O11—H211···O20.862.253.031 (3)150
O12—H112···O12vi0.862.443.058 (4)130
O12—H212···O3iv0.862.483.304 (3)161
O12—H212···O4iv0.862.523.166 (3)133
O15—H115···O4viii0.881.872.741 (3)171
O15—H215···O5i0.831.852.673 (3)174
O14—H114···O80.851.942.758 (3)163
O14—H214···O7ix0.861.782.643 (3)174
O13—H113···O2i0.831.972.789 (3)167
O13—H213···O1ii0.841.842.677 (3)174
Table 1

Selected bond lengths (Å)

Na1—O1i 2.4205 (19)
Na1—O5ii 2.384 (2)
Na1—O7iii 2.3737 (19)
Na1—O10iii 2.556 (2)
Na1—O112.546 (2)
Na1—O122.323 (2)
Li—O2i 1.927 (4)
Li—O81.930 (5)
Li—O101.964 (5)
Li—O111.972 (5)
Ni1—O132.0469 (16)
Ni1—O152.0572 (15)
Ni1—O142.0693 (18)

Symmetry codes: (i) ; (ii) ; (iii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O10—H110⋯O15iii 0.851.962.795 (3)165
O10—H210⋯O4iv 0.872.032.851 (3)159
O11—H111⋯O14iii 0.822.012.811 (3)164
O11—H211⋯O20.862.253.031 (3)150
O12—H112⋯O12v 0.862.443.058 (4)130
O12—H212⋯O3vi 0.862.483.304 (3)161
O12—H212⋯O4vi 0.862.523.166 (3)133
O15—H115⋯O4vii 0.881.872.741 (3)171
O15—H215⋯O5i 0.831.852.673 (3)174
O14—H114⋯O80.851.942.758 (3)163
O14—H214⋯O7viii 0.861.782.643 (3)174
O13—H113⋯O2i 0.831.972.789 (3)167
O13—H213⋯O1ii 0.841.842.677 (3)174

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

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