Literature DB >> 22903411

DISCOVERY OF GENES THAT AFFECT HUMAN BRAIN CONNECTIVITY: A GENOME-WIDE ANALYSIS OF THE CONNECTOME.

Neda Jahanshad1, Derrek P Hibar, April Ryles, Arthur W Toga, Katie L McMahon, Greig I de Zubicaray, Narelle K Hansell, Grant W Montgomery, Nicholas G Martin, Margaret J Wright, Paul M Thompson.   

Abstract

Human brain connectivity is disrupted in a wide range of disorders - from Alzheimer's disease to autism - but little is known about which specific genes affect it. Here we conducted a genome-wide association for connectivity matrices that capture information on the density of fiber connections between 70 brain regions. We scanned a large twin cohort (N=366) with 4-Tesla high angular resolution diffusion imaging (105-gradient HARDI). Using whole brain HARDI tractography, we extracted a relatively sparse 70×70 matrix representing fiber density between all pairs of cortical regions automatically labeled in co-registered anatomical scans. Additive genetic factors accounted for 1-58% of the variance in connectivity between 90 (of 122) tested nodes. We discovered genome-wide significant associations between variants and connectivity. GWAS permutations at various levels of heritability, and split-sample replication, validated our genetic findings. The resulting genes may offer new leads for mechanisms influencing aberrant connectivity and neurodegeneration.

Entities:  

Year:  2012        PMID: 22903411      PMCID: PMC3420975          DOI: 10.1109/ISBI.2012.6235605

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  14 in total

1.  Genetic influences on brain structure.

Authors:  P M Thompson; T D Cannon; K L Narr; T van Erp; V P Poutanen; M Huttunen; J Lönnqvist; C G Standertskjöld-Nordenstam; J Kaprio; M Khaledy; R Dail; C I Zoumalan; A W Toga
Journal:  Nat Neurosci       Date:  2001-12       Impact factor: 24.884

2.  Analytic approaches to twin data using structural equation models.

Authors:  Frühling V Rijsdijk; Pak C Sham
Journal:  Brief Bioinform       Date:  2002-06       Impact factor: 11.622

3.  Genetic influences on brain asymmetry: a DTI study of 374 twins and siblings.

Authors:  Neda Jahanshad; Agatha D Lee; Marina Barysheva; Katie L McMahon; Greig I de Zubicaray; Nicholas G Martin; Margaret J Wright; Arthur W Toga; Paul M Thompson
Journal:  Neuroimage       Date:  2010-04-27       Impact factor: 6.556

4.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.

Authors:  Rahul S Desikan; Florent Ségonne; Bruce Fischl; Brian T Quinn; Bradford C Dickerson; Deborah Blacker; Randy L Buckner; Anders M Dale; R Paul Maguire; Bradley T Hyman; Marilyn S Albert; Ronald J Killiany
Journal:  Neuroimage       Date:  2006-03-10       Impact factor: 6.556

5.  A comprehensive study of whole-brain functional connectivity in children and young adults.

Authors:  Dietsje D Jolles; Mark A van Buchem; Eveline A Crone; Serge A R B Rombouts
Journal:  Cereb Cortex       Date:  2010-06-11       Impact factor: 5.357

6.  A Hough transform global probabilistic approach to multiple-subject diffusion MRI tractography.

Authors:  Iman Aganj; Christophe Lenglet; Neda Jahanshad; Essa Yacoub; Noam Harel; Paul M Thompson; Guillermo Sapiro
Journal:  Med Image Anal       Date:  2011-01-26       Impact factor: 8.545

7.  OpenMx: An Open Source Extended Structural Equation Modeling Framework.

Authors:  Steven Boker; Michael Neale; Hermine Maes; Michael Wilde; Michael Spiegel; Timothy Brick; Jeffrey Spies; Ryne Estabrook; Sarah Kenny; Timothy Bates; Paras Mehta; John Fox
Journal:  Psychometrika       Date:  2011-04-01       Impact factor: 2.500

8.  Meeting the Challenges of Neuroimaging Genetics.

Authors:  Greig I de Zubicaray; Ming-Chang Chiang; Katie L McMahon; David W Shattuck; Arthur W Toga; Nicholas G Martin; Margaret J Wright; Paul M Thompson
Journal:  Brain Imaging Behav       Date:  2008-12-01       Impact factor: 3.978

9.  Genetics of brain fiber architecture and intellectual performance.

Authors:  Ming-Chang Chiang; Marina Barysheva; David W Shattuck; Agatha D Lee; Sarah K Madsen; Christina Avedissian; Andrea D Klunder; Arthur W Toga; Katie L McMahon; Greig I de Zubicaray; Margaret J Wright; Anuj Srivastava; Nikolay Balov; Paul M Thompson
Journal:  J Neurosci       Date:  2009-02-18       Impact factor: 6.167

10.  Avoiding the high Bonferroni penalty in genome-wide association studies.

Authors:  Xiaoyi Gao; Lewis C Becker; Diane M Becker; Joshua D Starmer; Michael A Province
Journal:  Genet Epidemiol       Date:  2010-01       Impact factor: 2.135

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  9 in total

1.  Mapping the human connectome.

Authors:  Arthur W Toga; Kristi A Clark; Paul M Thompson; David W Shattuck; John Darrell Van Horn
Journal:  Neurosurgery       Date:  2012-07       Impact factor: 4.654

2.  Development of brain structural connectivity between ages 12 and 30: a 4-Tesla diffusion imaging study in 439 adolescents and adults.

Authors:  Emily L Dennis; Neda Jahanshad; Katie L McMahon; Greig I de Zubicaray; Nicholas G Martin; Ian B Hickie; Arthur W Toga; Margaret J Wright; Paul M Thompson
Journal:  Neuroimage       Date:  2012-09-14       Impact factor: 6.556

3.  The heritability of multi-modal connectivity in human brain activity.

Authors:  Giles L Colclough; Stephen M Smith; Thomas E Nichols; Anderson M Winkler; Stamatios N Sotiropoulos; Matthew F Glasser; David C Van Essen; Mark W Woolrich
Journal:  Elife       Date:  2017-07-26       Impact factor: 8.140

4.  Frequency Specific Effects of ApoE ε4 Allele on Resting-State Networks in Nondemented Elders.

Authors:  Ying Liang; Zhenzhen Li; Jing Wei; Chunlin Li; Xu Zhang; Alzheimer's Disease Neuroimaging Initiative
Journal:  Biomed Res Int       Date:  2017-03-15       Impact factor: 3.411

5.  Random Forest Classification of Alcohol Use Disorder Using EEG Source Functional Connectivity, Neuropsychological Functioning, and Impulsivity Measures.

Authors:  Chella Kamarajan; Babak A Ardekani; Ashwini K Pandey; David B Chorlian; Sivan Kinreich; Gayathri Pandey; Jacquelyn L Meyers; Jian Zhang; Weipeng Kuang; Arthur T Stimus; Bernice Porjesz
Journal:  Behav Sci (Basel)       Date:  2020-03-01

6.  Super-variants identification for brain connectivity.

Authors:  Ting Li; Jianchang Hu; Shiying Wang; Heping Zhang
Journal:  Hum Brain Mapp       Date:  2020-11-24       Impact factor: 5.038

7.  A kernel machine method for detecting higher order interactions in multimodal datasets: Application to schizophrenia.

Authors:  Md Ashad Alam; Hui-Yi Lin; Hong-Wen Deng; Vince D Calhoun; Yu-Ping Wang
Journal:  J Neurosci Methods       Date:  2018-09-02       Impact factor: 2.390

8.  Multi-site genetic analysis of diffusion images and voxelwise heritability analysis: a pilot project of the ENIGMA-DTI working group.

Authors:  Neda Jahanshad; Peter V Kochunov; Emma Sprooten; René C Mandl; Thomas E Nichols; Laura Almasy; John Blangero; Rachel M Brouwer; Joanne E Curran; Greig I de Zubicaray; Ravi Duggirala; Peter T Fox; L Elliot Hong; Bennett A Landman; Nicholas G Martin; Katie L McMahon; Sarah E Medland; Braxton D Mitchell; Rene L Olvera; Charles P Peterson; John M Starr; Jessika E Sussmann; Arthur W Toga; Joanna M Wardlaw; Margaret J Wright; Hilleke E Hulshoff Pol; Mark E Bastin; Andrew M McIntosh; Ian J Deary; Paul M Thompson; David C Glahn
Journal:  Neuroimage       Date:  2013-04-28       Impact factor: 6.556

9.  How a common variant in the growth factor receptor gene, NTRK1, affects white matter.

Authors:  Meredith N Braskie; Neda Jahanshad; Arthur W Toga; Katie L McMahon; Greig I de Zubicaray; Nicholas G Martin; Margaret J Wright; Paul M Thompson
Journal:  Bioarchitecture       Date:  2012-09-01
  9 in total

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