Literature DB >> 22898819

The mammalian de novo DNA methyltransferases DNMT3A and DNMT3B are also DNA 5-hydroxymethylcytosine dehydroxymethylases.

Chun-Chang Chen1, Keh-Yang Wang, Che-Kun James Shen.   

Abstract

For cytosine (C) demethylation of vertebrate DNA, it is known that the TET proteins could convert 5-methyl C (5-mC) to 5-hydroxymethyl C (5-hmC). However, DNA dehydroxymethylase(s), or enzymes able to directly convert 5-hmC to C, have been elusive. We present in vitro evidence that the mammalian de novo DNA methyltransferases DNMT3A and DNMT3B, but not the maintenance enzyme DNMT1, are also redox-dependent DNA dehydroxymethylases. Significantly, intactness of the C methylation catalytic sites of these de novo enzymes is also required for their 5-hmC dehydroxymethylation activity. That DNMT3A and DNMT3B function bidirectionally both as DNA methyltransferases and as dehydroxymethylases raises intriguing and new questions regarding the structural and functional aspects of these enzymes and their regulatory roles in the dynamic modifications of the vertebrate genomes during development, carcinogenesis, and gene regulation.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22898819      PMCID: PMC3460417          DOI: 10.1074/jbc.C112.406975

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  42 in total

1.  In vivo activity of murine de novo methyltransferases, Dnmt3a and Dnmt3b.

Authors:  C L Hsieh
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

Review 2.  Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals.

Authors:  Rudolf Jaenisch; Adrian Bird
Journal:  Nat Genet       Date:  2003-03       Impact factor: 38.330

Review 3.  Chromatin modification and epigenetic reprogramming in mammalian development.

Authors:  En Li
Journal:  Nat Rev Genet       Date:  2002-09       Impact factor: 53.242

4.  5-Methylcytosine attack by hydroxyl free radicals and during carbon tetrachloride promoted liver microsomal lipid peroxidation: structure of reaction products.

Authors:  G D Castro; M I Díaz Gómez; J A Castro
Journal:  Chem Biol Interact       Date:  1996-01-05       Impact factor: 5.192

5.  The fission yeast gene pmt1+ encodes a DNA methyltransferase homologue.

Authors:  C R Wilkinson; R Bartlett; P Nurse; A P Bird
Journal:  Nucleic Acids Res       Date:  1995-01-25       Impact factor: 16.971

Review 6.  5-Methylcytosine in eukaryotic DNA.

Authors:  M Ehrlich; R Y Wang
Journal:  Science       Date:  1981-06-19       Impact factor: 47.728

7.  Induction of tumors in mice by genomic hypomethylation.

Authors:  François Gaudet; J Graeme Hodgson; Amir Eden; Laurie Jackson-Grusby; Jessica Dausman; Joe W Gray; Heinrich Leonhardt; Rudolf Jaenisch
Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

Review 8.  Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation.

Authors:  Hao Wu; Yi Zhang
Journal:  Genes Dev       Date:  2011-12-01       Impact factor: 11.361

9.  Oxidative damage to 5-methylcytosine in DNA.

Authors:  S Zuo; R J Boorstein; G W Teebor
Journal:  Nucleic Acids Res       Date:  1995-08-25       Impact factor: 16.971

Review 10.  DNA methylation in cancer: too much, but also too little.

Authors:  Melanie Ehrlich
Journal:  Oncogene       Date:  2002-08-12       Impact factor: 9.867

View more
  71 in total

Review 1.  Epigenetic choreography of stem cells: the DNA demethylation episode of development.

Authors:  Swayamsiddha Kar; Sabnam Parbin; Moonmoon Deb; Arunima Shilpi; Dipta Sengupta; Sandip Kumar Rath; Madhumita Rakshit; Aditi Patra; Samir Kumar Patra
Journal:  Cell Mol Life Sci       Date:  2013-10-10       Impact factor: 9.261

2.  Morphine induces redox-based changes in global DNA methylation and retrotransposon transcription by inhibition of excitatory amino acid transporter type 3-mediated cysteine uptake.

Authors:  Malav Trivedi; Jayni Shah; Nathaniel Hodgson; Hyang-Min Byun; Richard Deth
Journal:  Mol Pharmacol       Date:  2014-02-25       Impact factor: 4.436

3.  Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome.

Authors:  Rochelle L Tiedemann; Emily L Putiri; Jeong-Heon Lee; Ryan A Hlady; Katsunobu Kashiwagi; Tamas Ordog; Zhiguo Zhang; Chen Liu; Jeong-Hyeon Choi; Keith D Robertson
Journal:  Cell Rep       Date:  2014-11-06       Impact factor: 9.423

4.  Analysis of DNA methylation and gene expression in radiation-resistant head and neck tumors.

Authors:  Xiaofei Chen; Liang Liu; Jade Mims; Elizabeth C Punska; Kristin E Williams; Weiling Zhao; Kathleen F Arcaro; Allen W Tsang; Xiaobo Zhou; Cristina M Furdui
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

5.  Evaluation of anti-HIV-1 mutagenic nucleoside analogues.

Authors:  Valérie Vivet-Boudou; Catherine Isel; Yazan El Safadi; Redmond P Smyth; Géraldine Laumond; Christiane Moog; Jean-Christophe Paillart; Roland Marquet
Journal:  J Biol Chem       Date:  2014-11-14       Impact factor: 5.157

6.  DNA 5-methylcytosine demethylation activities of the mammalian DNA methyltransferases.

Authors:  Chun-Chang Chen; Keh-Yang Wang; Che-Kun James Shen
Journal:  J Biol Chem       Date:  2013-02-07       Impact factor: 5.157

7.  Expression of TET and 5-HmC in Trophoblast Villi of Women with Normal Pregnancy and with Early Pregnancy Loss.

Authors:  Ai-Hua Wu; Dong-Yu Yang; Yu-Dong Liu; Xin Chen; Xu-Long Chen; Shan Lu; Shi-Ling Chen
Journal:  Curr Med Sci       Date:  2018-06-22

Review 8.  DNA methylation and methylcytosine oxidation in cell fate decisions.

Authors:  Kian Peng Koh; Anjana Rao
Journal:  Curr Opin Cell Biol       Date:  2013-03-14       Impact factor: 8.382

Review 9.  5-Hydroxymethylcytosine: generation, fate, and genomic distribution.

Authors:  Li Shen; Yi Zhang
Journal:  Curr Opin Cell Biol       Date:  2013-03-13       Impact factor: 8.382

Review 10.  Tet family of 5-methylcytosine dioxygenases in mammalian development.

Authors:  Hongbo Zhao; Taiping Chen
Journal:  J Hum Genet       Date:  2013-05-30       Impact factor: 3.172

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.