Literature DB >> 22894392

Lung texture in serial thoracic CT scans: assessment of change introduced by image registration.

Alexandra R Cunliffe1, Hania A Al-Hallaq, Zacariah E Labby, Charles A Pelizzari, Christopher Straus, William F Sensakovic, Michelle Ludwig, Samuel G Armato.   

Abstract

PURPOSE: The aim of this study was to quantify the effect of four image registration methods on lung texture features extracted from serial computed tomography (CT) scans obtained from healthy human subjects.
METHODS: Two chest CT scans acquired at different time points were collected retrospectively for each of 27 patients. Following automated lung segmentation, each follow-up CT scan was registered to the baseline scan using four algorithms: (1) rigid, (2) affine, (3) B-splines deformable, and (4) demons deformable. The registration accuracy for each scan pair was evaluated by measuring the Euclidean distance between 150 identified landmarks. On average, 1432 spatially matched 32 × 32-pixel region-of-interest (ROI) pairs were automatically extracted from each scan pair. First-order, fractal, Fourier, Laws' filter, and gray-level co-occurrence matrix texture features were calculated in each ROI, for a total of 140 features. Agreement between baseline and follow-up scan ROI feature values was assessed by Bland-Altman analysis for each feature; the range spanned by the 95% limits of agreement of feature value differences was calculated and normalized by the average feature value to obtain the normalized range of agreement (nRoA). Features with small nRoA were considered "registration-stable." The normalized bias for each feature was calculated from the feature value differences between baseline and follow-up scans averaged across all ROIs in every patient. Because patients had "normal" chest CT scans, minimal change in texture feature values between scan pairs was anticipated, with the expectation of small bias and narrow limits of agreement.
RESULTS: Registration with demons reduced the Euclidean distance between landmarks such that only 9% of landmarks were separated by ≥1 mm, compared with rigid (98%), affine (95%), and B-splines (90%). Ninety-nine of the 140 (71%) features analyzed yielded nRoA > 50% for all registration methods, indicating that the majority of feature values were perturbed following registration. Nineteen of the features (14%) had nRoA < 15% following demons registration, indicating relative feature value stability. Student's t-tests showed that the nRoA of these 19 features was significantly larger when rigid, affine, or B-splines registration methods were used compared with demons registration. Demons registration yielded greater normalized bias in feature value change than B-splines registration, though this difference was not significant (p = 0.15).
CONCLUSIONS: Demons registration provided higher spatial accuracy between matched anatomic landmarks in serial CT scans than rigid, affine, or B-splines algorithms. Texture feature changes calculated in healthy lung tissue from serial CT scans were smaller following demons registration compared with all other algorithms. Though registration altered the values of the majority of texture features, 19 features remained relatively stable after demons registration, indicating their potential for detecting pathologic change in serial CT scans. Combined use of accurate deformable registration using demons and texture analysis may allow for quantitative evaluation of local changes in lung tissue due to disease progression or treatment response.

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Mesh:

Year:  2012        PMID: 22894392      PMCID: PMC3411586          DOI: 10.1118/1.4730505

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  26 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Computerized analysis of mammographic parenchymal patterns for assessing breast cancer risk: effect of ROI size and location.

Authors:  Hui Li; Maryellen L Giger; Zhimin Huo; Olufunmilayo I Olopade; Li Lan; Barbara L Weber; Ioana Bonta
Journal:  Med Phys       Date:  2004-03       Impact factor: 4.071

3.  A hybrid multimodal non-rigid registration of MR images based on diffeomorphic demons.

Authors:  Huanxiang Lu; Philippe C Cattin; Mauricio Reyes
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

4.  A new approach to quantifying lung damage after stereotactic body radiation therapy.

Authors:  David A Palma; John R van Sörnsen de Koste; Wilko F A R Verbakel; Suresh Senan
Journal:  Acta Oncol       Date:  2010-12-21       Impact factor: 4.089

5.  Objective assessment of deformable image registration in radiotherapy: a multi-institution study.

Authors:  Rojano Kashani; Martina Hub; James M Balter; Marc L Kessler; Lei Dong; Lifei Zhang; Lei Xing; Yaoqin Xie; David Hawkes; Julia A Schnabel; Jamie McClelland; Sarang Joshi; Quan Chen; Weiguo Lu
Journal:  Med Phys       Date:  2008-12       Impact factor: 4.071

6.  High performance computing for deformable image registration: towards a new paradigm in adaptive radiotherapy.

Authors:  Sanjiv S Samant; Junyi Xia; Pinar Muyan-Ozcelik; John D Owens
Journal:  Med Phys       Date:  2008-08       Impact factor: 4.071

7.  Image matching as a diffusion process: an analogy with Maxwell's demons.

Authors:  J P Thirion
Journal:  Med Image Anal       Date:  1998-09       Impact factor: 8.545

8.  Computer recognition of regional lung disease patterns.

Authors:  R Uppaluri; E A Hoffman; M Sonka; P G Hartley; G W Hunninghake; G McLennan
Journal:  Am J Respir Crit Care Med       Date:  1999-08       Impact factor: 21.405

9.  Validation of an accelerated 'demons' algorithm for deformable image registration in radiation therapy.

Authors:  He Wang; Lei Dong; Jennifer O'Daniel; Radhe Mohan; Adam S Garden; K Kian Ang; Deborah A Kuban; Mark Bonnen; Joe Y Chang; Rex Cheung
Journal:  Phys Med Biol       Date:  2005-06-01       Impact factor: 3.609

10.  Obstructive lung diseases: texture classification for differentiation at CT.

Authors:  Francois Chabat; Guang-Zhong Yang; David M Hansell
Journal:  Radiology       Date:  2003-07-17       Impact factor: 11.105

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  14 in total

1.  Lung texture in serial thoracic CT scans: correlation with radiologist-defined severity of acute changes following radiation therapy.

Authors:  Alexandra R Cunliffe; Samuel G Armato; Christopher Straus; Renuka Malik; Hania A Al-Hallaq
Journal:  Phys Med Biol       Date:  2014-08-26       Impact factor: 3.609

2.  IBEX: an open infrastructure software platform to facilitate collaborative work in radiomics.

Authors:  Lifei Zhang; David V Fried; Xenia J Fave; Luke A Hunter; Jinzhong Yang; Laurence E Court
Journal:  Med Phys       Date:  2015-03       Impact factor: 4.071

Review 3.  Texture analysis of medical images for radiotherapy applications.

Authors:  Elisa Scalco; Giovanna Rizzo
Journal:  Br J Radiol       Date:  2016-11-25       Impact factor: 3.039

4.  Effect of deformable registration on the dose calculated in radiation therapy planning CT scans of lung cancer patients.

Authors:  Alexandra R Cunliffe; Clay Contee; Samuel G Armato; Bradley White; Julia Justusson; Renuka Malik; Hania A Al-Hallaq
Journal:  Med Phys       Date:  2015-01       Impact factor: 4.071

5.  Incorporation of pre-therapy 18 F-FDG uptake data with CT texture features into a radiomics model for radiation pneumonitis diagnosis.

Authors:  Gregory J Anthony; Alexandra Cunliffe; Richard Castillo; Ngoc Pham; Thomas Guerrero; Samuel G Armato; Hania A Al-Hallaq
Journal:  Med Phys       Date:  2017-05-22       Impact factor: 4.071

6.  Comparison of Two Deformable Registration Algorithms in the Presence of Radiologic Change Between Serial Lung CT Scans.

Authors:  Alexandra R Cunliffe; Bradley White; Julia Justusson; Christopher Straus; Renuka Malik; Hania A Al-Hallaq; Samuel G Armato
Journal:  J Digit Imaging       Date:  2015-12       Impact factor: 4.056

7.  Lung texture in serial thoracic computed tomography scans: correlation of radiomics-based features with radiation therapy dose and radiation pneumonitis development.

Authors:  Alexandra Cunliffe; Samuel G Armato; Richard Castillo; Ngoc Pham; Thomas Guerrero; Hania A Al-Hallaq
Journal:  Int J Radiat Oncol Biol Phys       Date:  2015-02-07       Impact factor: 7.038

8.  Lung texture in serial thoracic CT scans: registration-based methods to compare anatomically matched regions.

Authors:  Alexandra R Cunliffe; Samuel G Armato; Xianhan M Fei; Rachel E Tuohy; Hania A Al-Hallaq
Journal:  Med Phys       Date:  2013-06       Impact factor: 4.071

9.  Effects of variability in radiomics software packages on classifying patients with radiation pneumonitis.

Authors:  Joseph J Foy; Samuel G Armato; Hania A Al-Hallaq
Journal:  J Med Imaging (Bellingham)       Date:  2020-02-21

10.  A Voxel-Based Approach to Explore Local Dose Differences Associated With Radiation-Induced Lung Damage.

Authors:  Giuseppe Palma; Serena Monti; Vittoria D'Avino; Manuel Conson; Raffaele Liuzzi; Maria Cristina Pressello; Vittorio Donato; Joseph O Deasy; Mario Quarantelli; Roberto Pacelli; Laura Cella
Journal:  Int J Radiat Oncol Biol Phys       Date:  2016-05-07       Impact factor: 7.038

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