Literature DB >> 22878554

Pseudomonas linyingensis sp. nov.: a novel bacterium isolated from wheat soil subjected to long-term herbicides application.

Wei-Hong He1, Ya-Nan Wang, Xun Du, Yang Zhou, Bin Jia, Jiang Bian, Shuang-Jiang Liu, Guo-Can Chen.   

Abstract

A strain of genus Pseudomonas, LYBRD3-7(T) was isolated from long-term sulfonylurea herbicides applied wheat-field soil in Linying located in Henan province of China. This strain is a strictly aerobic and Gram-negative short rod-shaped bacterium with single flagellum. Phylogenetic evaluation based on 16S rRNA gene sequence analysis placed this isolate as a member of Pseudomonas, and most closely to Pseudomonas tuomuerensis CGMCC 1.1365(T) (97.1 %) and P. alcaligenes IAM12411(T) (97.1 %). Morphological characters and chemotaxonomic data confirmed the affiliation of strain LYBRD3-7(T) to the genus Pseudomonas. The results of phylogenetic analysis, physiological and biochemical studies, and DNA-DNA hybridization allowed the differentiation of genotype and phenotype between strain LYBRD3-7(T) and the phylogenetic closest species with valid names. The name proposed for the new species is Pseudomonas linyingensis sp. nov. The type strain is LYBRD3-7(T) (=CGMCC 1.10701(T ) =LMG 25967(T)).

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22878554     DOI: 10.1007/s00284-012-0187-3

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  23 in total

1.  The linear PCR reaction: a simple and robust method for sequencing amplified rRNA genes.

Authors:  T M Embley
Journal:  Lett Appl Microbiol       Date:  1991-09       Impact factor: 2.858

2.  Hydrogen sulphide production by bacteria.

Authors:  P H CLARKE
Journal:  J Gen Microbiol       Date:  1953-06

3.  Halomonas campaniensis sp. nov., a haloalkaliphilic bacterium isolated from a mineral pool of Campania Region, Italy.

Authors:  Ida Romano; Assunta Giordano; Licia Lama; Barbara Nicolaus; Agata Gambacorta
Journal:  Syst Appl Microbiol       Date:  2005-09       Impact factor: 4.022

4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

5.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

6.  A detailed phenotypic characterisation of the type strains of Halomonas species.

Authors:  Jua Antonio Mata; José Martínez-Cánovas; Emilia Quesada; Victoria Béjar
Journal:  Syst Appl Microbiol       Date:  2002-10       Impact factor: 4.022

7.  Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment.

Authors:  Qi-Long Qin; Dian-Li Zhao; Jing Wang; Xiu-Lan Chen; Hong-Yue Dang; Tie-Gang Li; Yu-Zhong Zhang; Pei-Ji Gao
Journal:  FEMS Microbiol Lett       Date:  2007-03-28       Impact factor: 2.742

8.  Pseudomonas panipatensis sp. nov., isolated from an oil-contaminated site.

Authors:  Sanjay Kumar Gupta; Rekha Kumari; Om Prakash; Rup Lal
Journal:  Int J Syst Evol Microbiol       Date:  2008-06       Impact factor: 2.747

9.  Pseudomonas tuomuerensis sp. nov., isolated from a bird's nest.

Authors:  Yu-Hua Xin; De-Chao Zhang; Hong-Can Liu; Hui-Ling Zhou; Yu-Guang Zhou
Journal:  Int J Syst Evol Microbiol       Date:  2009-01       Impact factor: 2.747

10.  Pseudomonas japonica sp. nov., a novel species that assimilates straight chain alkylphenols.

Authors:  Wiboonluk Pungrasmi; Haeng-Seog Lee; Akira Yokota; Akinori Ohta
Journal:  J Gen Appl Microbiol       Date:  2008-02       Impact factor: 1.452

View more
  5 in total

1.  Pseudomonas hunanensis sp. nov., isolated from soil subjected to long-term manganese pollution.

Authors:  Jian Gao; Bai-Yuan Li; Hai-Hua Wang; Zhi-Qiang Liu
Journal:  Curr Microbiol       Date:  2014-02-23       Impact factor: 2.188

Review 2.  Pseudomonas pratensis sp. nov., Isolated from Grassland Soil from Inner Mongolia, China.

Authors:  Meng Zhang; Lixin Shen; Jiajia Shi; Linxia Chen; Ying Luo; Jiquan Sun; Deliang Fan; Shintaro Hara; Zhihua Bao
Journal:  Curr Microbiol       Date:  2021-01-02       Impact factor: 2.188

3.  Crystal structure of thermally stable homodimeric cytochrome c'-β from Thermus thermophilus.

Authors:  Taisuke Yoshimi; Sotaro Fujii; Hiroya Oki; Takeshi Igawa; Hannah R Adams; Kengo Ueda; Kazuki Kawahara; Tadayasu Ohkubo; Michael A Hough; Yoshihiro Sambongi
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2022-05-27       Impact factor: 1.072

4.  Effects of a sulfonylurea herbicide on the soil bacterial community.

Authors:  Dallel Arabet; Sébastien Tempel; Michel Fons; Yann Denis; Cécile Jourlin-Castelli; Joshua Armitano; David Redelberger; Chantal Iobbi-Nivol; Abderrahmane Boulahrouf; Vincent Méjean
Journal:  Environ Sci Pollut Res Int       Date:  2014-01-14       Impact factor: 4.223

5.  Genome analysis of Pseudomonas sp. OF001 and Rubrivivax sp. A210 suggests multicopper oxidases catalyze manganese oxidation required for cylindrospermopsin transformation.

Authors:  Erika Berenice Martínez-Ruiz; Myriel Cooper; Jimena Barrero-Canosa; Mindia A S Haryono; Irina Bessarab; Rohan B H Williams; Ulrich Szewzyk
Journal:  BMC Genomics       Date:  2021-06-22       Impact factor: 3.969

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.