| Literature DB >> 22874010 |
Fernando A L Marson1, Carmen S Bertuzzo, Taís D R Hortencio, José D Ribeiro, Luciana C Bonadia, Antônio F Ribeiro.
Abstract
BACKGROUND: Cystic Fibrosis (CF) is a monogenic disease with complex expression because of the action of genetic and environmental factors. We investigated whether the ACE gene D/I polymorphism is associated with severity of CF.Entities:
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Year: 2012 PMID: 22874010 PMCID: PMC3460779 DOI: 10.1186/1471-2466-12-41
Source DB: PubMed Journal: BMC Pulm Med ISSN: 1471-2466 Impact factor: 3.317
Description of quantitative variables (in months) of CF patients treated at the pediatric clinic at UNICAMP
| Age | 179 | 7 | 288 | 154 | 212.64 | 14.13 | 189.04 |
| Onset of the manifestation | 170 | 0 | 156 | 3 | 34.69 | 8.33 | 108.54 |
| Age at diagnosis | 173 | 0 | 170 | 24 | 91.47 | 12.44 | 163.60 |
| Onset of digestive symptons | 150 | 0 | 150 | 3 | 40.69 | 8.93 | 109.32 |
| Onset of lungs symptons | 165 | 0 | 156 | 6 | 42.88 | 9.24 | 118.68 |
| 1st. | 131 | 6 | 180 | 31 | 102.60 | 15.16 | 173.47 |
*N- number of patients.
Association ofgene D/I polymorphism with variables used as markers of severity of CF, patients followed at the pediatric center in UNICAMP distributed bygene mutation identified divided into cohorts
| Patients age | W:0.791 | 0.374 | W:3x10-5 | 0.995 | W:2.969 | 0.085 | W:0.001 | 0.984 | |
| Onset of clinical manifestations | W:0.116 | 0.733 | W:0.162 | 0.687 | W:0.937 | 0.333 | |||
| Diagnostic | W:0.11 | 0.74 | W:0.047 | 0.83 | W:0.099 | 0.753 | W:0.087 | 0.768 | |
| Onset of digestive symptons | W:1.494 | 0.221 | W:0.148 | 0.7 | W:0.297 | 0.586 | W:0.979 | 0.322 | |
| Onset of lung symptons | W:0.021 | 0.885 | W:0.039 | 0.843 | W:0.401 | 0.526 | W:1.302 | 0.31 | |
| BMI | W:1.169 | 0.28 | W:0.687 | 0.407 | W:0.436 | 0.509 | W:2.498 | 0.114 | |
| Nasal poliposys | W:0.62 | 0.431 | W:0.984 | 0.321 | W:0.419 | 0.517 | W:1.26 | 0.262 | |
| Diabetes | W:0.358 | 0.55 | W:0.016 | 0.901 | W:0.174 | 0.676 | W:0.184 | 0.668 | |
| Osteoporosis | W:0.877 | 0.349 | W:1.056 | 0.0304 | W:0.561 | 0.454 | W:0.083 | 0.773 | |
| Pancreatic insuficience | W:1.6 | 0.206 | W:0.693 | 0.406 | W:1.063 | 0.302 | W:0.182 | 0.669 | |
| Meconium ileus | W-0.252 | 0.616 | W:3.813 | 0.051 | W:1.109 | 0.292 | W:1.498 | 0.221 | |
| SaO2 | F:2.131 | 0.142 | F:0.022 | 0.884 | F:1.868 | 0.178 | F:1.344 | 0.25 | |
| Scores | Bhalla | F:0.2 | 0.689 | ||||||
| Kanga | F:1.3 | 0.256 | F:0.486 | 0.492 | F:0.027 | 0.871 | F:3.765 | 0.057 | |
| SK | F:2.361 | 0.127 | F:0.286 | 0.597 | F:1.042 | 0.312 | F:1.243 | 0.269 | |
| FVC | F:0.139 | 0.71 | F:0.829 | 0.37 | F:0.918 | 0.345 | F:0.93 | 0.339 | |
| FEV1 | F:0.785 | 0.377 | F:0.622 | 0.436 | F:0.907 | 0.348 | F:2.797 | 0.099 | |
| FEV1/FVC | F:0.891 | 0.347 | F:0.005 | 0.943 | F:2.212 | 0.146 | F:0.156 | 0.694 | |
| FEF25-75% | F:0.42 | 0.518 | F:0.112 | 0.735 | F:0.02 | 0.887 | F:1.048 | 0.31 | |
| 1a | W:0.962 | 0.327 | W:0.702 | 0.402 | W:0.16 | 0.69 | W:0.099 | 0.753 | |
| Isolated Bacteria | PAM | W:0.92 | 0.338 | W:0.141 | 0.708 | W:2.016 | 0.156 | W:0.165 | 0.684 |
| PANM | W:1.21 | 0.272 | W:1.149 | 0.284 | W:0.987 | 0.753 | W:0.262 | 0.609 | |
| AX | W:3.2 | 0.074 | W:0.038 | 0.845 | W:0.642 | 0.423 | W:2.911 | 0.088 | |
| BC | W:0.1 | 0.753 | W:3.681 | 0.055 | W:0.341 | 0.559 | |||
| SA | W:0.209 | 0.65 | W:1.151 | 0.283 | W:0.191 | 0.662 | W:1.102 | 0.294 | |
Analysis by linear regression (F) and logistic regression (W) test . Values below of 0.05 for p denote a clinical correlation between variables. E - Statistical,% - percentage, SaO2 - transcutaneous oxygen saturation, FEV1 – forced expiratory volume in 1 second, FVC – forced expiratory capacity, FEV1/FVC – ratio between two variables, forced FEF25-75, SC - expiratory flow at 25-75% of the pulmonary volume, SK - Shwachman-Kulczycki, PAM – P. aeruginosa mucoid, PAM – P. aeruginosa non mucoid, AX – A. xylosoxidans, BC – B. cepacia, SA – S. aureus, BMI – body mass index, CF - cystic fibrosis, ACE – angiotensin converting enzyme. No identified mutation (44 patients) – patients without of identified mutation in classes I, II or III. One identified mutation (51 patients) – patient with one identified mutation in class I, II, or III. Two identified mutation (85 patients) – patient with two mutations in class I, II and/or III. Others identified mutations as class IV (P205S e R334W) was included in the statistical analysis in the not identified mutation subgroup, to minimize the associated factor with the mutation classes in the CFTR gene.
Association ofgene D/I polymorphism with onset of clinical symptoms of patients in months considering the cohorts tomutation
| Without taking | I/I | 38 | 28 | 66 | 0,880 | 0,644 | 0.012 | 0.9136 | 1.035 (0.555 - 1.931) |
| I/D | 44 | 37 | 81 | 0.473 | 0.492 | 0.808 (0.4396 -1.484) | |||
| D/D | 15 | 8 | 23 | 0.723 | 0.395 | 1.486 (0.5937, 3.721) | |||
| No identified | I/I | 13 | 6 | 19 | 1,685 | 0,431 | 0.825 | 0.364 | 1.806 (0.5017 -6.498) |
| I/D | 9 | 9 | 18 | 1.624 | 0.203 | 0.438 (0.122 - 1.576) | |||
| D/D | 3 | 1 | 4 | 0.357 | 0.977 | 2.045 (0.194 - 21.58) | |||
| One | I/I | 10 | 11 | 21 | |||||
| I/D | 14 | 6 | 20 | 0.521 | 0.471 | 1.167 (0.775 – 1.757) | |||
| D/D | 8 | 1 | 9 | 2.951 | 0.097 | 5,667 (0,647 – 49,61) | |||
| Two | I/I | 15 | 11 | 26 | 0,599 | 1,026 | 0.773 | 0.379 | 1.527 (0.593 - 3.936) |
| I/D | 21 | 22 | 43 | 0.122 | 0.727 | 0.854 (0.352 - 2.072) | |||
| D/D | 4 | 6 | 10 | 0.511 | 0.704 | 0.611 (0.158 - 2.358) |
Values below 0.05 for p denote clinical correlation between variables. OR - odds ratio, CI- confidence interval, ≤ − less than or equal to, > − greater, D - deleted allele, I - insertion allele. No identified mutation (44 patients) – patients without of identified mutation in classes I, II or III. One identified mutation (51 patients) – patient with one identified mutation in class I, II, or III. Two identified mutation (85 patients) – patient with two mutations in class I, II or III.
Association of thegene D/I polymorphism, withoutgenotype distribution and presence of(BC)
| Without taking | I/I | 8 | 64 | 72 | 0.468 | 0.498 | 0.699 (0.319 – 1.534) | ||
| I/D | 9 | 74 | 82 | 0.814 | 0.182 | 0.651 (0.304 – 1.394) | |||
| D/D | 8 | 16 | 24 | ||||||
| No identified | I/I | 3 | 18 | 21 | 0.530 | 0.767 | 0.003 | 1.29 | 1.056 (0.188 - 5.925) |
| I/D | 2 | 16 | 18 | 0.204 | 1.00 | 0.656 (0.107 - 4.041) | |||
| D/D | 1 | 3 | 4 | 0.438 | 0.93 | 2.267 (0.196 - 26.27) | |||
| One | I/I | 2 | 20 | 22 | 5.539 | 0.063 | 1.248 | 0.466 | 0.383 (0.069 - 2.117) |
| I/D | 2 | 18 | 20 | 0.787 | 0.629 | 0.463 (0.084 - 2.562) | |||
| D/D | 4 | 5 | 9 | ||||||
| Two | I/I | 3 | 26 | 29 | 0.511 | 0.774 | 0.084 | 1.07 | 0.8077 (0.193 - 3.387) |
| I/D | 5 | 40 | 45 | 0.039 | 1.10 | 0.875 (0.234 - 3.275) | |||
| D/D | 2 | 9 | 11 | 0.495 | 0.764 | 1.833 (0.335 - 10.02) |
Values below 0.05 for p denote clinical correlation between variables. OR - odds ratio, CI- confidence interval, D - deleted allele, I - insertion allele. No identified mutation (44 patients) – patients without of identified mutation in classes I, II or III. One identified mutation (51 patients) – patient with one identified mutation in class I, II, or III. Two identified mutation (85 patients) – patient with two mutations in class I, II or III.
Figure 1Association of clinical data, with numerical distribution, withgene D/I polymorphism and subgroups ofmutations. a Bloxplot denoting the association of the ACE gene D/I polymorphism in patients without taking CFTR gene into account. There were significant differences between groups of patients with the genotypes D/D and I/I. # p: 0.092 * p: 0.768, ¥ p: 0.045. b. Bloxplot denoting the association of the ACE gene D/I polymorphism in the subgroup of patients for whom one class I, II and III mutation have been identified. There were significant differences between groups of patients with genotypes D/D and I/I. # p: 0.478, * p: 0.183; ¥ p: 0.043. c. Bloxplot denoting the association of the ACE gene D/I polymorphism in the subgroup of patients for whom two class I, II and/or III mutation have been identified. There were significant differences between groups of patients with genotype D/D and I/I. # p: 0.789 * p: 0.505; ¥ p: 0.05. Analysis was performed by Mann–Whitney test considering a p-value of 0.05 as statistically significant