| Literature DB >> 25667564 |
Ronny Tah Yen Ng1, Fernando Augusto de Lima Marson2, Jose Dirceu Ribeiro3, Antonio Fernando Ribeiro3, Carmen Silvia Bertuzzo4, Maria Angela Gonçalves de Oliveira Ribeiro3, Silvana Dalge Severino3, Eulalia Sakano1.
Abstract
The gold standard for diagnosing cystic fibrosis (CF) is a sweat chloride value above 60 mEq/L. However, this historical and important tool has limitations; other techniques should be studied, including the nasal potential difference (NPD) test. CFTR gene sequencing can identify CFTR mutations, but this method is time-consuming and too expensive to be used in all CF centers. The present study compared CF patients with two classes I-III CFTR mutations (10 patients) (G1), CF patients with classes IV-VI CFTR mutations (five patients) (G2), and 21 healthy subjects (G3). The CF patients and healthy subjects also underwent the NPD test. A statistical analysis was performed using the Mann-Whitney, Kruskal-Wallis, χ(2), and Fisher's exact tests, α = 0.05. No differences were observed between the CF patients and healthy controls for the PDMax, Δamiloride, and Δchloride + free + amiloride markers from the NPD test. For the finger value, a difference between G2 and G3 was described. The Wilschanski index values were different between G1 and G3. In conclusion, our data showed that NPD is useful for CF diagnosis when classes I-III CFTR mutations are screened. However, if classes IV-VI are considered, the NPD test showed an overlap in values with healthy subjects.Entities:
Mesh:
Year: 2015 PMID: 25667564 PMCID: PMC4312569 DOI: 10.1155/2015/306825
Source DB: PubMed Journal: Dis Markers ISSN: 0278-0240 Impact factor: 3.434
Clinical and laboratory characteristics of the cystic fibrosis patients enrolled in the study∗.
| Gender (male) | 15 | 7 (46.7%) |
| Race (Caucasian) | 15 | 15 (100%) |
| Age (months) | 15 | 213.13 ± 122.03; 171 (87–443) |
| Onset of symptoms (months) | 14 | 6.93 ± 13.28; 1 (0–39) |
| Onset of pulmonary symptoms (months) | 14 | 10.86 ± 19.21; 3 (0–69) |
| Onset of digestive symptoms (months) | 12 | 19.92 ± 38.57; 1 (0–120) |
| Diagnosis (months) | 14 | 54.14 ± 101.95; 8,50 (1–378) |
| Body mass index (normal values) | 15 | 12 (80%) |
| Nasal polyposis (presence) | 15 | 3 (20%) |
| Diabetes mellitus (presence) | 15 | 2 (13.3%) |
| Osteoporosis (presence) | 15 | 3 (20%) |
| Pancreatic insufficiency (presence) | 15 | 13 (86.7%) |
| Meconium ileus (presence) | 15 | 3 (20%) |
|
| 15 | 10 (66.7%) |
| Mucoid | 15 | 8 (53.3%) |
|
| 15 | 2 (13.3%) |
|
| 15 | 4 (26.7%) |
|
| 15 | 12 (80%) |
| Weight (kg) | 15 | 43.67 ± 17.02; 34 (21–70) |
| Height (m) | 15 | 1.58 ± 0.50; 1 (1-2) |
| Body mass index | 15 | 18.35 ± 2.67; 17.75 (14.33–21.60) |
| SpO2 | 14 | 96.07 ± 1.64; 96 (94–98) |
| Bhalla | 11 | 8.82 ± 4.75; 10 (0–17) |
| Kanga | 13 | 22.54 ± 12.16; 21 (12–60) |
| Shwachman-Kulczycki | 13 | 69.23 ± 12.39; 65 (50–90) |
| FVC | 15 | 84.60 ± 22.02; 82 (57–131) |
| FEV1 | 15 | 76.40 ± 25.84; 72 (30–132) |
| FEV1/FVC | 14 | 78.36 ± 19.17; 85 (37–100) |
| FEF25–75% | 14 | 59.50 ± 34.25; 57,50 (70–118) |
∗The data are shown as N (percentage) for the categorical data and as the mean ± standard deviation and the median (minimum and maximum) values for the numerical data. N: number of patients; SpO2: blood oxygen saturation; FVC: forced vital capacity; FEV1: forced expiratory volume in the first second; FEF25–75%: forced expiratory flow between 25 and 75% of the FVC.
Clinical and laboratory characteristics of the cystic fibrosis patients enrolled in the study.
| Clinical markers* | G1 | G2 |
|
|---|---|---|---|
| Gender (male) | 5 | 2 | 1 |
| Race (Caucasian) | 10 | 5 | — |
| Age (months) | 210.60 ± 132.01; 146 (87–443) | 336.40 ± 119.13; 336 (170–480) | 0.099 |
| Onset of symptoms (months) | 8.20 ± 15.50; 1 (0–39) | 3.75 ± 4.86; 1.50 (1–11) | 0.454 |
| Onset of pulmonary symptoms (months) | 13.60 ± 22.26; 4 (0–69) | 4 ± 4.97; 2.50 (0–11) | 0.539 |
| Onset of digestive symptoms (months) | 23.70 ± 41.51; 1 (0–120) | 1 ± 1.41; 1 (0–2) | 0.758 |
| Diagnosis (months) | 36.10 ± 47.24; 17 (1–144) | 99.25 ± 8.50; 185.88 (2–378) | 1 |
| Body mass index (normal values) | 9 | 3 | 0.242 |
| Nasal polyposis (presence) | 1 | 2 | 0.242 |
| Diabetes mellitus (presence) | 2 | — | 0.524 |
| Osteoporosis (presence) | 1 | 2 | 0.242 |
| Pancreatic insufficiency (presence) | 10 | 3 | 0.095 |
| Meconium ileus (presence) | 3 | — | 0.505 |
|
| 6 | 4 | 0.600 |
| Mucoid | 4 | 4 | 0.282 |
|
| 2 | — | 0.524 |
|
| 3 | 1 | 1 |
|
| 9 | 3 | 0.242 |
| Weight (kg) | 41.50 ± 17.51; 36 (21–66) | 48 ± 16.98; 50 (27–70) | 0.513 |
| Height (m) | 1.74 ± 0.43; 2 (1-2) | 1.50 ± 0.53; 1.50 (1-2) | 0.594 |
| Body mass index | 18.54 ± 3.18; 19.95 (14.38–21.60) | 18.25 ± 2.56; 18.48 (14.34–21.31) | 0.768 |
| SpO2 | 96.10 ± 1.45; 96 (94–98) | 96 ± 2.31; 96 (94–98) | 1 |
| Bhalla | 8 ± 4.74; 7 (0–17) | 12.50 ± 3.53; 12.50 (10–15) | 0.327 |
| Kanga | 19 ± 4.82; 19 (12–25) | 30.50 ± 20.17; 23.50 (15–60) | 0.260 |
| Shwachman-Kulczycki | 68.50 ± 13.34; 65 (50–90) | 71.67 ± 10.40; 75 (60–80) | 0.811 |
| FVC | 91.80 ± 20.02; 87.50 (69–131) | 70.20 ± 20.17; 63 (57–106) |
|
| FEV1 | 85.10 ± 22.41; 75.50 (64–132) | 59 ± 25.40; 60 (30–95) | 0.055 |
| FEV1/FVC | 82.60 ± 18.92; 85.50 (37–100) | 67.75 ± 17.58; 71 (46–83) | 0.106 |
| FEF25–75% | 71.40 ± 30.85; 66 (33–118) | 45.50 ± 24.78; 47.50 (17–70) | 0.188 |
*The data are shown as N (percentage) for the categorical data; the statistical analysis consisted of the χ 2 test and Fisher's exact test; the mean ± standard deviation and median (minimum and maximum) values were used for the numerical data that was analyzed by the Mann-Whitney U test. N: number of patients; SpO2: blood oxygen saturation; FVC: forced vital capacity; FEV1: forced expiratory volume in the first second; FEF25–75%: forced expiratory flow between 25 and 75% of the FVC. G1: cystic fibrosis patients with two class I, II, or III CFTR mutations; G2: cystic fibrosis patients with at least one class IV, V, or V CFTR mutation.
Figure 1(a) CFTR mutations distributed by exon/intron localization and class. (b) CFTR gene with exon and intron descriptions. (c) CFTR protein domains. (d) For all the data, consider the following: (A) cystic fibrosis patients with two class I, II, or III CFTR mutations; (B) cystic fibrosis patients with two class IV, V, or VI CFTR mutations; and (C) healthy subjects. The comparison was made using the Mann-Whitney U test considering the following associations: A versus B, A versus C, and B versus C. α considered was 0.05. For the finger (mV), ∗ P = 1; # P = 0.021; ¥ P = 0.003. For the PDMax (mV), P = 0.426; # P = 0.040; ¥ P = 0.416. For the Δamiloride (mV), ∗ P = 0.394; # P = 0.554; ¥ P = 0.474. For the Δchloride-free + isoproterenol, ∗ P = 0.390; # P = 0.007; ¥ P = 0.125. For the Wilschanski index, ∗ P = 0.050; # P = 0.002; ¥ P = 0.345. The maximum difference was observed by finger (B versus C) and for the Wilschanski index (A versus C). CFTR = cystic fibrosis transmembrane regulator, MSD = membrane-spanning domains, NBD = nucleotide-binding domains, R = regulator, and mV = millivolts.
CFTR mutations found in the individuals under study. Gene and protein localization. Mutation classification and frequency from the present study are designated. Traditional and HGVS standard nomenclaturea for CFTR mutations are also indicated.
| Traditional nomenclature | HGVS nomenclatureb | Localization ( | Consequence | Protein localization | Mutation classification | Predicted functional class | |
|---|---|---|---|---|---|---|---|
| cDNA name | Protein name | ||||||
| F508del | c.1521_1523delCTT | p.Phe508del | Exon 10 | Point deletion | NBD1 | A | II |
| G542X | c.1624G>T | p.Gly542X | Exon 11 | Nonsense | NBD1 | A | I |
| P205S | c.613C>T | p.Pro205Ser | Exon 6a | Missense | TM3 | A | IV |
| 1717-1G>A | c.1585-1G>A | — | IVS11 | Splicing | — | A | I |
| 1812-1G>A | c.1680-1G>A | — | IVS12 | Splicing | — | A | I |
| 3272-26A>G | c.3140-26A>G | — | IVS17b | Splicing | — | A | V |
| V562I | c.1684G>A | p.Val562Ile | Exon 12 | Missense | NBD1 | B | — |
| D1152H | c.3454G>C | pAsp1152Hist | Exon 21 | Missense | NBD2 | A | IV |
| IVS8-5T | — | — | Intron 8 | Splicing | — | A | V |
A: CF-causing mutation; B: CFTR-RD mutation; C: mutation with no clinical consequence.
aReference CFTR sequence accession number: NM_000492.3; nucleotide number 1 corresponds to the A of the ATG translation initiation codon; in the reference sequence, it is numbered as 133.
bAccording to the HVGS guidelines, this mutation should be named 1585–9412 bp A>G.
cTraditional nomenclature.
Association of nasal potential difference between cystic fibrosis patients and healthy subjects.
| NPD variables | Groups |
| Mean | Standard deviation | Standard error | Confidence interval | Minimum | Maximum |
#
|
| |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 5% | 95% | ||||||||||
| Finger (mV) | A | 10 | −31.40 | 27.452 | 8.681 | −51.04 | −11.76 | −57 | 37 |
|
|
| B | 5 | −39.40 | 7.956 | 3.558 | −49.28 | −29.52 | −52 | −31 | |||
| C | 21 | −20.10 | 16.078 | 3.508 | −27.41 | −12.78 | −41 | 36 | |||
| Total |
|
|
|
|
|
|
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| |||
|
| |||||||||||
| PDMax (mV) | A | 10 | −2.40 | 18.075 | 5.716 | −15.33 | 10.53 | −42 | 21 | 0.111 | 0.555 |
| B | 5 | 5.60 | 14.064 | 6.290 | −11.86 | 23.06 | −12 | 23 | |||
| C | 21 | 10.52 | 11.378 | 2.483 | 5.34 | 15.70 | −14 | 28 | |||
| Total |
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| |||||||||||
| Δamiloride (mV) | A | 10 | 12.30 | 18.379 | 5.812 | −0.85 | 25.45 | −20 | 42 | 0.611 | 1 |
| B | 5 | 5.20 | 15.353 | 6.866 | −13.86 | 24.26 | −10 | 27 | |||
| C | 21 | 9.52 | 10.482 | 2.287 | 4.75 | 14.29 | −5 | 45 | |||
| Total |
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|
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| |||
|
| |||||||||||
| Δchloride-free + isoproterenol | A | 10 | 0.750 | 7.270 | 2.299 | −4.450 | 5.950 | −12.0 | 12.5 |
| 0.08 |
| B | 5 | −1.800 | 5.805 | 2.596 | −9.008 | 5.408 | −7.0 | 7.0 | |||
| C | 21 | −7.881 | 8.235 | 1.7971 | −11.630 | −4.132 | −26.5 | 6.0 | |||
| Total |
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| |||||||||||
| Wilschanski index | A | 10 | 1.112 | 0.627 | 0.198 | 0.664 | 1.561 | 0.535 | 2.718 |
|
|
| B | 5 | 0.610 | 0.274 | 0.123 | 0.269 | 0.950 | 0.223 | 0.883 | |||
| C | 21 | 0.435 | 0.362 | 0.081 | 0.267 | 0.603 | 0 | 1.051 | |||
| Total |
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|
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| |||
N = number of patients; CF = cystic fibrosis; mV = millivolts; PDMax = maximum NPD; Wilschanski index = e Δchloride/Δamiloride.
#Kruskal-Wallis statistical test.
The positive P value is in italic.
The P value was corrected using the Bonferroni test. Five analyses were performed on the same sample group.