Literature DB >> 22872369

Actinopolyspora algeriensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil.

Atika Meklat1, Noureddine Bouras, Abdelghani Zitouni, Florence Mathieu, Ahmed Lebrihi, Peter Schumann, Cathrin Spröer, Hans-Peter Klenk, Nasserdine Sabaou.   

Abstract

A halophilic actinomycete strain designated H19(T), was isolated from a Saharan soil in the Bamendil region (Ouargla province, South Algeria) and was characterized taxonomically by using a polyphasic approach. The morphological and chemotaxonomic characteristics of the strain were consistent with those of members of the genus Actinopolyspora, and 16S rRNA gene sequence analysis confirmed that strain H19(T) was a novel species of the genus Actinopolyspora. DNA-DNA hybridization value between strain H19(T) and the nearest Actinopolyspora species, A. halophila, was clearly below the 70 % threshold. The genotypic and phenotypic data showed that the organism represents a novel species of the genus Actinopolyspora for which the name Actinopolyspora algeriensis sp. nov. is proposed, with the type strain H19(T) (= DSM 45476(T) = CCUG 62415(T)).

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Year:  2012        PMID: 22872369     DOI: 10.1007/s00792-012-0473-9

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  17 in total

1.  An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa.

Authors:  Xiao-Yang Zhi; Wen-Jun Li; Erko Stackebrandt
Journal:  Int J Syst Evol Microbiol       Date:  2009-03       Impact factor: 2.747

2.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

3.  A rapid method for the base ratio determination of bacterial DNA.

Authors:  P Cashion; M A Holder-Franklin; J McCully; M Franklin
Journal:  Anal Biochem       Date:  1977-08       Impact factor: 3.365

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

8.  The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov.

Authors:  F A Rainey; N Ward-Rainey; R M Kroppenstedt; E Stackebrandt
Journal:  Int J Syst Bacteriol       Date:  1996-10

9.  Isolation and characterization of Actinopolyspora halophila, gen. et sp. nov., an extremely halophilic actinomycete.

Authors:  M B Gochnauer; G G Leppard; P Komaratat; M Kates; T Novitsky; D J Kushner
Journal:  Can J Microbiol       Date:  1975-10       Impact factor: 2.419

10.  Nocardiopsis kunsanensis sp. nov., a moderately halophilic actinomycete isolated from a saltern.

Authors:  J Chun; K S Bae; E Y Moon; S O Jung; H K Lee; S J Kim
Journal:  Int J Syst Evol Microbiol       Date:  2000-09       Impact factor: 2.747

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  5 in total

1.  Actinopolyspora biskrensis sp. nov., a novel halophilic actinomycete isolated from Northern Sahara.

Authors:  Rafika Saker; Noureddine Bouras; Atika Meklat; Abdelghani Zitouni; Peter Schumann; Cathrin Spröer; Hans-Peter Klenk; Nasserdine Sabaou
Journal:  Curr Microbiol       Date:  2014-11-28       Impact factor: 2.188

2.  Genome-based reclassification of Actinopolyspora righensis Meklat et al. 2013 as a later heterotypic synonym of Actinopolyspora lacussalsi Guan et al. 2013 and description of Actinopolyspora lacussalsi subsp. lacussalsi subsp. nov. and Actinopolyspora lacussalsi subsp. righensis subsp. nov.

Authors:  Rafika Saker; Noureddine Bouras; Atika Meklat; Michael D Holtz; Hans-Peter Klenk; Imen Nouioui
Journal:  Arch Microbiol       Date:  2022-07-18       Impact factor: 2.667

3.  Systematic and biotechnological aspects of halophilic and halotolerant actinomycetes.

Authors:  Javad Hamedi; Fatemeh Mohammadipanah; Antonio Ventosa
Journal:  Extremophiles       Date:  2012-11-06       Impact factor: 2.395

4.  Isolation and identification of endophytic actinobacteria from Citrullus colocynthis (L.) Schrad and their antibacterial properties.

Authors:  Aram R Ali; Yadollah Bahrami; Elham Kakaei; Sara Mohammadzadeh; Sasan Bouk; Nastaran Jalilian
Journal:  Microb Cell Fact       Date:  2022-10-10       Impact factor: 6.352

Review 5.  Actinobacteria Derived from Algerian Ecosystems as a Prominent Source of Antimicrobial Molecules.

Authors:  Ibtissem Djinni; Andrea Defant; Mouloud Kecha; Ines Mancini
Journal:  Antibiotics (Basel)       Date:  2019-10-01
  5 in total

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