Literature DB >> 22851445

Basic biology of GAPDH.

Norbert W Seidler1.   

Abstract

The GAPDH gene is highly conserved with a promoter that contains several types of regulatory elements, perhaps even in a distal intron. Curiously, the transcription start site shows some ambiguity and there are codon-sharing exons at alternate exon junctions. While there is only one functional gene for GAPDH in humans, the genome is littered with pseudogenes, representing a trove of researchable content. Tissue-specific expression speaks to the glycolytic function of GAPDH; thus, it's not surprising to see expression increased in cancer cells. Modulation of protein levels becomes an opportunity for intervention. The abundance of GAPDH in the cell provides the rationale (albeit, tenuous) for its use as a loading control. The single paralogous GAPDHS, which is the spermatogenic form of the protein, provides a curious study in cell-type specificity and perhaps intervention (i.e. contraception). And it is no wonder that great biochemists were kept busy for decades unveiling the nuances of GAPDH enzymology. While the active site of the enzyme is well-characterized and the catalytic mechanism is well-described, the role of inter-subunit interactions in catalysis still offers some mysteries, particularly with regards to other emerging enzymatic properties. The GAPDH protein exhibits an intrinsic asymmetry of the subunits, which also may speak to its functional diversity.

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Year:  2013        PMID: 22851445     DOI: 10.1007/978-94-007-4716-6_1

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  26 in total

1.  Assessment of reference genes for real-time quantitative PCR gene expression normalization during C2C12 and H9c2 skeletal muscle differentiation.

Authors:  Twinkle J Masilamani; Julie J Loiselle; Leslie C Sutherland
Journal:  Mol Biotechnol       Date:  2014-04       Impact factor: 2.695

Review 2.  Reprogramming glucose metabolism in cancer: can it be exploited for cancer therapy?

Authors:  Nissim Hay
Journal:  Nat Rev Cancer       Date:  2016-09-16       Impact factor: 60.716

3.  Mangostanaxanthones III and IV: advanced glycation end-product inhibitors from the pericarp of Garcinia mangostana.

Authors:  Hossam M Abdallah; Hany M El-Bassossy; Gamal A Mohamed; Ali M El-Halawany; Khalid Z Alshali; Zainy M Banjar
Journal:  J Nat Med       Date:  2016-10-13       Impact factor: 2.343

4.  Structural analyses to identify selective inhibitors of glyceraldehyde 3-phosphate dehydrogenase-S, a sperm-specific glycolytic enzyme.

Authors:  Polina V Danshina; Weidong Qu; Brenda R Temple; Rafael J Rojas; Michael J Miley; Mischa Machius; Laurie Betts; Deborah A O'Brien
Journal:  Mol Hum Reprod       Date:  2016-02-26       Impact factor: 4.025

5.  A proton relay enhances H2O2 sensitivity of GAPDH to facilitate metabolic adaptation.

Authors:  David Peralta; Agnieszka K Bronowska; Bruce Morgan; Éva Dóka; Koen Van Laer; Péter Nagy; Frauke Gräter; Tobias P Dick
Journal:  Nat Chem Biol       Date:  2015-01-12       Impact factor: 15.040

6.  Emodin induces liver injury by inhibiting the key enzymes of FADH/NADPH transport in rat liver.

Authors:  Xiaowei Yang; Yinhuan Zhang; Yan Liu; Chang Chen; Wenjuan Xu; Hongbin Xiao
Journal:  Toxicol Res (Camb)       Date:  2018-05-14       Impact factor: 3.524

7.  Occurrence of a multimeric high-molecular-weight glyceraldehyde-3-phosphate dehydrogenase in human serum.

Authors:  Rani Kunjithapatham; Jean-Francois Geschwind; Lauren Devine; Tatiana N Boronina; Robert N O'Meally; Robert N Cole; Michael S Torbenson; Shanmugasundaram Ganapathy-Kanniappan
Journal:  J Proteome Res       Date:  2015-03-18       Impact factor: 4.466

8.  Mapping Proteome-Wide Targets of Environmental Chemicals Using Reactivity-Based Chemoproteomic Platforms.

Authors:  Daniel Medina-Cleghorn; Leslie A Bateman; Breanna Ford; Ann Heslin; Karl J Fisher; Esha D Dalvie; Daniel K Nomura
Journal:  Chem Biol       Date:  2015-10-22

9.  High-resolution crystal structures of the photoreceptor glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with three and four-bound NAD molecules.

Authors:  Bo Y Baker; Wuxian Shi; Benlian Wang; Krzysztof Palczewski
Journal:  Protein Sci       Date:  2014-09-25       Impact factor: 6.725

10.  Oxidation of an exposed methionine instigates the aggregation of glyceraldehyde-3-phosphate dehydrogenase.

Authors:  Andre L Samson; Anja S Knaupp; Itamar Kass; Oded Kleifeld; Emilia M Marijanovic; Victoria A Hughes; Chris J Lupton; Ashley M Buckle; Stephen P Bottomley; Robert L Medcalf
Journal:  J Biol Chem       Date:  2014-08-01       Impact factor: 5.157

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