Literature DB >> 22823933

Modeling the signatures of hydrides in metalloenzymes: ENDOR analysis of a Di-iron Fe(μ-NH)(μ-H)Fe core.

R Adam Kinney1, Caroline T Saouma, Jonas C Peters, Brian M Hoffman.   

Abstract

The application of 35 GHz pulsed EPR and ENDOR spectroscopies has established that the biomimetic model complex L(3)Fe(μ-NH)(μ-H)FeL(3) (L(3) = [PhB(CH(2)PPh(2))(3)](-)) complex, 3, is a novel S = (1)/(2) type-III mixed-valence di-iron II/III species, in which the unpaired electron is shared equally between the two iron centers. (1,2)H and (14,15)N ENDOR measurements of the bridging imide are consistent with an allyl radical molecular orbital model for the two bridging ligands. Both the (μ-H) and the proton of the (μ-NH) of the crystallographically characterized 3 show the proposed signature of a 'bridging' hydride that is essentially equidistant between two 'anchor' metal ions: a rhombic dipolar interaction tensor, T ≈ [T, -T, 0]. The point-dipole model for describing the anisotropic interaction of a bridging H as the sum of the point-dipole couplings to the 'anchor' metal ions reproduces this signature with high accuracy, as well as the axial tensor of a terminal hydride, T ≈ [-T, -T, 2T], thus validating both the model and the signatures. This validation in turn lends strong support to the assignment, based on such a point-dipole analysis, that the molybdenum-iron cofactor of nitrogenase contains two [Fe-H(-)-Fe] bridging-hydride fragments in the catalytic intermediate that has accumulated four reducing equivalents (E(4)). Analysis further reveals a complementary similarity between the isotropic hyperfine couplings for the bridging hydrides in 3 and E(4). This study provides a foundation for spectroscopic study of hydrides in a variety of reducing metalloenzymes in addition to nitrogenase.

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Year:  2012        PMID: 22823933      PMCID: PMC3433054          DOI: 10.1021/ja303739g

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  27 in total

1.  Paramagnetic bridging hydrides of relevance to catalytic hydrogen evolution at metallosulfur centers.

Authors:  Aušra Jablonskytė; Joseph A Wright; Shirley A Fairhurst; Jamie N T Peck; Saad K Ibrahim; Vasily S Oganesyan; Christopher J Pickett
Journal:  J Am Chem Soc       Date:  2011-11-02       Impact factor: 15.419

2.  Combining steady-state and dynamic methods for determining absolute signs of hyperfine interactions: pulsed ENDOR Saturation and Recovery (PESTRE).

Authors:  Peter E Doan
Journal:  J Magn Reson       Date:  2010-10-14       Impact factor: 2.229

3.  Trapping H- bound to the nitrogenase FeMo-cofactor active site during H2 evolution: characterization by ENDOR spectroscopy.

Authors:  Robert Y Igarashi; Mikhail Laryukhin; Patricia C Dos Santos; Hong-In Lee; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2005-05-04       Impact factor: 15.419

4.  Connecting nitrogenase intermediates with the kinetic scheme for N2 reduction by a relaxation protocol and identification of the N2 binding state.

Authors:  Dmitriy Lukoyanov; Brett M Barney; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-24       Impact factor: 11.205

5.  57Fe ENDOR spectroscopy and 'electron inventory' analysis of the nitrogenase E4 intermediate suggest the metal-ion core of FeMo-cofactor cycles through only one redox couple.

Authors:  Peter E Doan; Joshua Telser; Brett M Barney; Robert Y Igarashi; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2011-10-07       Impact factor: 15.419

6.  Transformation of an [Fe(η2-N2H3)]+ species to π-delocalized [Fe2(μ-N2H2)](2+/+) complexes.

Authors:  Caroline T Saouma; R Adam Kinney; Brian M Hoffman; Jonas C Peters
Journal:  Angew Chem Int Ed Engl       Date:  2011-03-10       Impact factor: 15.336

7.  Mechanistic aspects of the protonation of [FeFe]-hydrogenase subsite analogues.

Authors:  Ausra Jablonskyte; Joseph A Wright; Christopher J Pickett
Journal:  Dalton Trans       Date:  2010-01-19       Impact factor: 4.390

8.  Climbing nitrogenase: toward a mechanism of enzymatic nitrogen fixation.

Authors:  Brian M Hoffman; Dennis R Dean; Lance C Seefeldt
Journal:  Acc Chem Res       Date:  2009-05-19       Impact factor: 22.384

9.  Nitrogenase of Klebsiella pneumoniae. Kinetics of the dissociation of oxidized iron protein from molybdenum-iron protein: identification of the rate-limiting step for substrate reduction.

Authors:  R N Thorneley; D J Lowe
Journal:  Biochem J       Date:  1983-11-01       Impact factor: 3.857

10.  A nickel hydride complex in the active site of methyl-coenzyme m reductase: implications for the catalytic cycle.

Authors:  Jeffrey Harmer; Cinzia Finazzo; Rafal Piskorski; Sieglinde Ebner; Evert C Duin; Meike Goenrich; Rudolf K Thauer; Markus Reiher; Arthur Schweiger; Dariush Hinderberger; Bernhard Jaun
Journal:  J Am Chem Soc       Date:  2008-07-25       Impact factor: 15.419

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  13 in total

Review 1.  Frontiers, opportunities, and challenges in biochemical and chemical catalysis of CO2 fixation.

Authors:  Aaron M Appel; John E Bercaw; Andrew B Bocarsly; Holger Dobbek; Daniel L DuBois; Michel Dupuis; James G Ferry; Etsuko Fujita; Russ Hille; Paul J A Kenis; Cheryl A Kerfeld; Robert H Morris; Charles H F Peden; Archie R Portis; Stephen W Ragsdale; Thomas B Rauchfuss; Joost N H Reek; Lance C Seefeldt; Rudolf K Thauer; Grover L Waldrop
Journal:  Chem Rev       Date:  2013-06-14       Impact factor: 60.622

2.  High-Frequency Fe-H Vibrations in a Bridging Hydride Complex Characterized by NRVS and DFT.

Authors:  Vladimir Pelmenschikov; Leland B Gee; Hongxin Wang; K Cory MacLeod; Sean F McWilliams; Kazimer L Skubi; Stephen P Cramer; Patrick L Holland
Journal:  Angew Chem Int Ed Engl       Date:  2018-06-25       Impact factor: 15.336

3.  Diiron bridged-thiolate complexes that bind N2 at the Fe(II)Fe(II), Fe(II)Fe(I), and Fe(I)Fe(I) redox states.

Authors:  Sidney E Creutz; Jonas C Peters
Journal:  J Am Chem Soc       Date:  2015-06-09       Impact factor: 15.419

4.  Interplay between Terminal and Bridging Diiron Hydrides in Neutral and Oxidized States.

Authors:  Xin Yu; Chen-Ho Tung; Wenguang Wang; Mioy T Huynh; Danielle L Gray; Sharon Hammes-Schiffer; Thomas B Rauchfuss
Journal:  Organometallics       Date:  2017-05-18       Impact factor: 3.876

Review 5.  Reactivity, Mechanism, and Assembly of the Alternative Nitrogenases.

Authors:  Andrew J Jasniewski; Chi Chung Lee; Markus W Ribbe; Yilin Hu
Journal:  Chem Rev       Date:  2020-03-04       Impact factor: 60.622

Review 6.  Insight into the Iron-Molybdenum Cofactor of Nitrogenase from Synthetic Iron Complexes with Sulfur, Carbon, and Hydride Ligands.

Authors:  Ilija Čorić; Patrick L Holland
Journal:  J Am Chem Soc       Date:  2016-06-03       Impact factor: 15.419

7.  High-Resolution ENDOR Spectroscopy Combined with Quantum Chemical Calculations Reveals the Structure of Nitrogenase Janus Intermediate E4(4H).

Authors:  Veronika Hoeke; Laura Tociu; David A Case; Lance C Seefeldt; Simone Raugei; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2019-07-16       Impact factor: 15.419

Review 8.  The Spectroscopy of Nitrogenases.

Authors:  Casey Van Stappen; Laure Decamps; George E Cutsail; Ragnar Bjornsson; Justin T Henthorn; James A Birrell; Serena DeBeer
Journal:  Chem Rev       Date:  2020-04-02       Impact factor: 60.622

9.  Synthesis, spectroscopy, and hydrogen/deuterium exchange in high-spin iron(II) hydride complexes.

Authors:  Thomas R Dugan; Eckhard Bill; K Cory MacLeod; William W Brennessel; Patrick L Holland
Journal:  Inorg Chem       Date:  2014-02-20       Impact factor: 5.165

Review 10.  Mechanism of nitrogen fixation by nitrogenase: the next stage.

Authors:  Brian M Hoffman; Dmitriy Lukoyanov; Zhi-Yong Yang; Dennis R Dean; Lance C Seefeldt
Journal:  Chem Rev       Date:  2014-01-27       Impact factor: 60.622

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