Literature DB >> 22822270

Speeding up Evolutionary Search by Small Fitness Fluctuations.

Jakub Otwinowski1, Sorin Tanase-Nicola, Ilya Nemenman.   

Abstract

We consider a fixed size population that undergoes an evolutionary adaptation in the weak mutation rate limit, which we model as a biased Langevin process in the genotype space. We show analytically and numerically that, if the fitness landscape has a small highly epistatic (rough) and time-varying component, then the population genotype exhibits a high effective diffusion in the genotype space and is able to escape local fitness minima with a large probability. We argue that our principal finding that even very small time-dependent fluctuations of fitness can substantially speed up evolution is valid for a wide class of models.

Entities:  

Year:  2011        PMID: 22822270      PMCID: PMC3401026          DOI: 10.1007/s10955-011-0199-6

Source DB:  PubMed          Journal:  J Stat Phys        ISSN: 0022-4715            Impact factor:   1.548


  19 in total

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Authors:  M KIMURA
Journal:  Genetics       Date:  1962-06       Impact factor: 4.562

2.  Interdependence of cell growth and gene expression: origins and consequences.

Authors:  Matthew Scott; Carl W Gunderson; Eduard M Mateescu; Zhongge Zhang; Terence Hwa
Journal:  Science       Date:  2010-11-19       Impact factor: 47.728

3.  Theory of the statistics of kinetic transitions with application to single-molecule enzyme catalysis.

Authors:  Irina V Gopich; Attila Szabo
Journal:  J Chem Phys       Date:  2006-04-21       Impact factor: 3.488

4.  A species near its equilibrium size in a fluctuating environment can evolve a lower intrinsic rate of increase.

Authors:  D G Heckel; J Roughgarden
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

5.  Universal geometric theory of mesoscopic stochastic pumps and reversible ratchets.

Authors:  N A Sinitsyn; Ilya Nemenman
Journal:  Phys Rev Lett       Date:  2007-11-30       Impact factor: 9.161

6.  An evolutionary maximum principle for density-dependent population dynamics in a fluctuating environment.

Authors:  Russell Lande; Steinar Engen; Bernt-Erik Saether
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-06-12       Impact factor: 6.237

7.  Nonergodicity mimics inhomogeneity in single particle tracking.

Authors:  Ariel Lubelski; Igor M Sokolov; Joseph Klafter
Journal:  Phys Rev Lett       Date:  2008-06-26       Impact factor: 9.161

8.  Genome evolution and adaptation in a long-term experiment with Escherichia coli.

Authors:  Jeffrey E Barrick; Dong Su Yu; Sung Ho Yoon; Haeyoung Jeong; Tae Kwang Oh; Dominique Schneider; Richard E Lenski; Jihyun F Kim
Journal:  Nature       Date:  2009-10-18       Impact factor: 49.962

9.  Periodic Lotka-Volterra competition equations.

Authors:  J M Cushing
Journal:  J Math Biol       Date:  1986       Impact factor: 2.259

10.  Adaptation to the fitness costs of antibiotic resistance in Escherichia coli.

Authors:  S J Schrag; V Perrot; B R Levin
Journal:  Proc Biol Sci       Date:  1997-09-22       Impact factor: 5.349

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