Literature DB >> 22821476

Technical and practical aspects of (19) F NMR-based screening: toward sensitive high-throughput screening with rapid deconvolution.

Claudio Dalvit1, Anna Vulpetti.   

Abstract

The technical and practical aspects of (19) F NMR-based screening against a macromolecular target are analyzed in detail. A novel method utilizing the relaxation of (19) F homonuclear double quantum coherence is proposed for performing NMR-based binding assays in a direct- or competition-mode format. A combined strategy based on (19) F NMR chemical shift prediction, 2D (19) F NMR DOSY, and 2D (19) F-(1) H NMR long-range COSY experiments is presented for the deconvolution of complex mixtures of fluorinated molecules generated by either addition of single compounds or by chemical synthesis. The approaches presented here allow the screening of complex mixtures, even in the case where the exact composition is not known, and the rapid identification of the binders contained in the mixtures.
Copyright © 2012 John Wiley & Sons, Ltd.

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Year:  2012        PMID: 22821476     DOI: 10.1002/mrc.3842

Source DB:  PubMed          Journal:  Magn Reson Chem        ISSN: 0749-1581            Impact factor:   2.447


  8 in total

1.  ¹⁹F NMR indicator displacement assay using a synthetic receptor with appended paramagnetic relaxation agent.

Authors:  Adam J Plaunt; Kasey J Clear; Bradley D Smith
Journal:  Chem Commun (Camb)       Date:  2014-09-18       Impact factor: 6.222

2.  The interaction of fatty acid amide hydrolase (FAAH) inhibitors with an anandamide carrier protein using (19)F-NMR.

Authors:  Jianqin Zhuang; De-Ping Yang; Spyros P Nikas; Jianhong Zhao; Jianxin Guo; Alexandros Makriyannis
Journal:  AAPS J       Date:  2013-01-24       Impact factor: 4.009

Review 3.  Current NMR Techniques for Structure-Based Drug Discovery.

Authors:  Toshihiko Sugiki; Kyoko Furuita; Toshimichi Fujiwara; Chojiro Kojima
Journal:  Molecules       Date:  2018-01-12       Impact factor: 4.411

4.  CcpNmr AnalysisScreen, a new software programme with dedicated automated analysis tools for fragment-based drug discovery by NMR.

Authors:  Luca G Mureddu; Timothy J Ragan; Edward J Brooksbank; Geerten W Vuister
Journal:  J Biomol NMR       Date:  2020-07-07       Impact factor: 2.835

Review 5.  Applications of Solution NMR in Drug Discovery.

Authors:  Li Shi; Naixia Zhang
Journal:  Molecules       Date:  2021-01-22       Impact factor: 4.411

6.  19F multiple-quantum coherence NMR spectroscopy for probing protein-ligand interactions.

Authors:  Anna Zawadzka-Kazimierczuk; Mate Somlyay; Hanspeter Kaehlig; George Iakobson; Petr Beier; Robert Konrat
Journal:  RSC Adv       Date:  2018-12-05       Impact factor: 3.361

Review 7.  NMR approaches in structure-based lead discovery: recent developments and new frontiers for targeting multi-protein complexes.

Authors:  David M Dias; Alessio Ciulli
Journal:  Prog Biophys Mol Biol       Date:  2014-08-28       Impact factor: 3.667

8.  ¹⁹F NMR fingerprints: identification of neutral organic compounds in a molecular container.

Authors:  Yanchuan Zhao; Georgios Markopoulos; Timothy M Swager
Journal:  J Am Chem Soc       Date:  2014-07-22       Impact factor: 15.419

  8 in total

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