Improved methods for quickly identifying neutral organic compounds and differentiation of analytes with similar chemical structures are widely needed. We report a new approach to effectively "fingerprint" neutral organic molecules by using (19)F NMR and molecular containers. The encapsulation of analytes induces characteristic up- or downfield shifts of (19)F resonances that can be used as multidimensional parameters to fingerprint each analyte. The strategy can be achieved either with an array of fluorinated receptors or by incorporating multiple nonequivalent fluorine atoms in a single receptor. Spatial proximity of the analyte to the (19)F is important to induce the most pronounced NMR shifts and is crucial in the differentiation of analytes with similar structures. This new scheme allows for the precise and simultaneous identification of multiple analytes in a complex mixture.
Improved methods for quickly identifying neutral organic compounds and differentiation of analytes with similar chemical structures are widely needed. We report a new approach to effectively "fingerprint" neutral organic molecules by using (19)F NMR and molecular containers. The encapsulation of analytes induces characteristic up- or downfield shifts of (19)F resonances that can be used as multidimensional parameters to fingerprint each analyte. The strategy can be achieved either with an array of fluorinated receptors or by incorporating multiple nonequivalent fluorine atoms in a single receptor. Spatial proximity of the analyte to the (19)F is important to induce the most pronounced NMR shifts and is crucial in the differentiation of analytes with similar structures. This new scheme allows for the precise and simultaneous identification of multiple analytes in a complex mixture.
There is an increasing awareness of the
need for more selective
and reliable methods to detect and rapidly identify target analytes
of interest in a variety of contexts relevant to health care, process
control, and environmental monitoring.[1] Chemosensory systems designed to assist in this process are molecular
constructs that respond to a stimulus and give a measurable change
in electronic, optical, and/or chemical/spectroscopic properties.[2] Transduction generally involves molecular associations
or an electron transfer process between the analyte and a receptor.[3] These interactions typically occur at a specific
bonding site, and sensing methods based on this strategy are best
suited to detect classes of structurally related analytes, but often
fail in the precise discrimination of related species. Array sensing
has emerged as an approach that increases discriminatory power by
combining signals collected by a large amount of individual sensors.[4] However, without highly orthogonal discrimination
between analytes, this method often has difficulty in unambiguously
identifying analytes at unknown concentrations. Herein, we report
a sensing method based on 19F NMR and the encapsulation
of an analyte with molecular containers. The method provides a unique
spectroscopic signature (fingerprint) that allows for an output and
enables precise and simultaneous identification of multiple guest
molecules in a complex mixture.[5]19F NMR has emerged as a versatile tool in biological
and pharmaceutical studies as a result of the high sensitivity and
scarcity of naturally occurring background signals.[6] Libraries of fluorinated compounds are used to identify
potential ligands that bind to target proteins.[7] Fluorinated biological molecules have utility in the determination
of enzyme activity.[8] In addition to reaction
monitoring, such as the hydrolysis of a fluorine-containing substrate,
various metal ions can be detected through reversible association
with fluorinated chelates or crown ethers where characteristic shifts
are generated for each metal ion.[9] As the
induced 19F NMR shifts are largely dependent on the through-bond
disturbance of electron density at the fluorine atom upon association,
charged species are typically selected as target analytes. In contrast,
the detection and differentiation of neutral organic molecules with
similar structures represents a significant challenge for most sensing
methods.To achieve our goal of unique identification of an
analyte, our
platform needs to meet the following criteria: (1) The molecular recognition
event is sufficiently defined to provide a well-structured binding
complex. (2) There are a number of independently varying 19F NMR signals that shift to provide a robust multidimensional discrimination
of an analyte. (3) The shift of the 19F resonance should
be induced by spatial proximity rather than through-bond electron
density transmission so that the structure information on the whole
molecule can be accessed by spatially arranged fluorine atoms.Molecular containers, such as cavitands and capsules with different
levels of preorganization, have found wide-ranging applications in
molecular recognition.[10] By design, the
encapsulation of an analyte induces a change of the environment inside
the container, thereby creating easily discernible 19F NMR shifts. The multidimensional output can be achieved either
with an array of receptors bearing equivalent fluorine atoms at different
positions relative to the analyte (Scheme 1a) or by employing a single receptor with multiple nonequivalent
fluorine atoms (Scheme 1b). As a result of
the scarcity of organic fluorine compounds in nature,[6,11] it is unlikely that there will be interfering signals, and our scheme
provides an efficient method to fingerprint a chosen analyte.[12]
Scheme 1
Schematic Illustration of 19F
NMR Spectroscopy Identification
of Organic Molecules with Molecular Containers
Results and Discussion
We chose
calix[4]arenetungsten–imido complexes as a scaffold
from which to produce partially fluorinated molecular containers on
the basis of their synthetic accessibility and the fact that the Lewis
acidic nature of the metal center gives predictable binding structures
with Lewis basic analytes.[13] To evaluate
the feasibility of the strategy based on encapsulation and the chemical
shift induced by spatial proximity, we examined calixarenetungsten–imido
complexes appended with spatially varying trifluoromethyl (CF3) and trifluoromethoxy (OCF3) groups at the upper
rim (Scheme 2, complexes 1–4). In addition to an array of complexes that can be employed
together to output a fingerprint, receptors 5 and 5a with multiple nonequivalent fluorine atoms are also prepared
(Scheme 2).
Scheme 2
Fluorinated Calix[4]arene–Tungsten
Complexes Employed in This
Study
Synthesis
The −CF3 and −OCF3-substituted calix[4]arenes 7–10 were prepared through a Suzuki–Miyaura
coupling of diiodocalix[4]arene
(6) and various organoboronic acids followed by a demethylation
with Me3SiI (Scheme 3a). The target
bis(pentafluorophenyl)-substituted calix[4]arene (11)
was prepared through a silver-mediated direct coupling of 6 and pentafluorobenzene recently reported by Zhang and co-workers.[14] The methyl groups were subsequently removed
by treatment with BBr3 in CH2Cl2 at
low temperature (Scheme 3b). The corresponding
tungsten–imido complexes 1–5 were obtained using a previously reported “one-pot”
procedure from calixarenes 7–11 by
reaction with WOCl4 and iminophosphorane (Ph3P=NR) reagent.[15]
Scheme 3
Preparation of Fluorinated
Calix[4]arenes 7–11
NMR Fingerprinting with an Array of Receptors
To evaluate
the fidelity of this strategy in the precise identification of structurally
similar molecules, we selected a series of nitriles with an interest
in differentiating pesticides and pharmaceuticals.[16] The Lewis basic nitrile can be encapsulated in the molecular
containers 1–5 and 5a through the formation of a coordination bond with the tungsten atom.
Sensing experiments are performed by adding analytes to chloroform
solutions of 1 at ambient temperature. The formation
of a static complex with 1 is critical to create a clear
shift rather than a dynamic structure that will produce shifts that
are more akin to a solvent effect.[15] In
this way, the fluorine atoms provide discrete signals at precise shifts
that are uniquely assignable to the encapsulated analytes. Notably,
the −OCF3 group in tungsten complex 1 appears as a singlet at −56.63 ppm (Figure 1a), which is very close to the shift found with parent calix[4]arene 7 (−56.51 ppm), indicating the remote through-bond
effects are not efficient to induce a 19F NMR shift. In
contrast, the binding of nitriles to 1 produces 0.2–0.9
ppm downfield shifts in 19F NMR as a result of the disturbance
of the environment through replacement of solvent molecules by the
analyte. Consistent with this model, acetonitrile induces a much smaller
shift than less electron-donating 3-bromopropionitrile. All of our
results are consistent with the differences in 19F NMR
of free and bound complex 1 being caused by spatial proximity
rather than through-bond electron transmission (Figure 1d,g). The precision in the identification of molecules is
illustrated by comparison of the differences induced by the binding
of acetonitrile, propionitrile, and nonanenitrile with 1. In this experiment, nonanenitrile induces a more pronounced downfield
shift than propionitrile and acetonitrile (Figure 1d–f). The power of this method was further evaluated
by the analysis of a mixture with a number of potential guest molecules.
In this experiment, a mixture of nine different nitriles and 1 gave the same spectrum as obtained by superimposing the
spectra recorded with each analyte independently (Figure 1b,c). It is notable that the precise identification
of the multiple neutral organic analytes in a mixture represents a
powerful advance in chemical sensing.
Figure 1
19F NMR spectra (64 scans) of complex 1 alone and mixtures
of complex 1 (1.0 mM in CDCl3) and different
analytes (2.0 mM): (a) complex 1 alone, (b) nine nitriles
added to a solution of 1 in
CDCl3, (c) superimposition of the spectra of complex 1 with each of the nine nitriles from (b) collected independently,
(d)–(o) complex 1 bound to various nitriles.
19F NMR spectra (64 scans) of complex 1 alone and mixtures
of complex 1 (1.0 mM in CDCl3) and different
analytes (2.0 mM): (a) complex 1 alone, (b) nine nitriles
added to a solution of 1 in
CDCl3, (c) superimposition of the spectra of complex 1 with each of the nine nitriles from (b) collected independently,
(d)–(o) complex 1 bound to various nitriles.We next explored the sensing properties
of 2-CF3-substituted
complex 2. Interestingly, although the encapsulation
of alkyl nitriles (Figure 2d–h) and
benzyl nitriles (Figure 2i,j) produces downfield
shifts which are also observed in the experiments with 1, aromatic nitriles (Figure 2k–o) induced
upfield shifts upon binding, thus providing a facile way to determine
the identity of the analyte. Unlike the trend observed in the experiments
with 1, the bonding of 3-bromopropionitrile with 2 gives a smaller downfield shift than that of acetonitrile
and nonanenitrile (Figure 2d–g). This
result indicates receptors/sensors with orthogonal discriminatory
power can be easily produced by incorporating fluorine atoms at different
positions. Similarly, complex 2 also shows the ability
to identify a series of nitriles in a complex mixture (Figure 2b).
Figure 2
19F NMR spectra (64 scans) of complex 2 alone and mixtures of complex 2 (1.0 mM in
CDCl3) and different analytes (2.0 mM): (a) complex 2 alone, (b) eight nitriles added to a solution of 2 in
CDCl3, (c) superimposition of the spectra of complex 2 with each of the eight nitriles from (b) collected independently,
(d)–(o) complex 2 bound to various nitriles.
19F NMR spectra (64 scans) of complex 2 alone and mixtures of complex 2 (1.0 mM in
CDCl3) and different analytes (2.0 mM): (a) complex 2 alone, (b) eight nitriles added to a solution of 2 in
CDCl3, (c) superimposition of the spectra of complex 2 with each of the eight nitriles from (b) collected independently,
(d)–(o) complex 2 bound to various nitriles.The differences observed for individual
analytes are shown in Figures 1 and 2, and the characteristic
up- and downfield shifts induced by each analyte are given in a two-dimensional
plot, with the 19F resonances of 1 and 2 as the axes (Figure 3). Simple inspection
of these data reveals the ability of the combined sensor system to
resolve all the alkyl and benzyl nitriles. In contrast, the discrimination
of benzonitriles with the para-substituents investigated
is still not satisfactory probably because the remote substituent
only results in a minimal magnetic influence on the fluorine atoms
in receptors 1 and 2. Consistent with this
assumption, 3-iodobenzonitrile with the substituent closer to the
fluorine atom displays behavior different from that of para-substituented nitriles (Figure 3). It should
be mentioned that a difference of 0.03 ppm leads to a baseline separation
of singlet peaks in our 19F NMR spectra, which correlates
to a magnitude of 30 on the axes used in Figure 3.
Figure 3
2D scatter of analytes based on the shifts of 19F resonances
upon bonding: x axis, OCF3 fluorine (1) (−Δδ × 1000); y axis, CF3 fluorine (2) (−Δδ
× 1000).
2D scatter of analytes based on the shifts of 19F resonances
upon bonding: x axis, OCF3 fluorine (1) (−Δδ × 1000); y axis, CF3 fluorine (2) (−Δδ
× 1000).To achieve better resolution
of benzonitriles, we examined complexes 3 and 4 with −OCF3 and −CF3 groups in
the meta-position, respectively
(Scheme 2). By design, the fluorine atoms in
these complexes are closer to the para-substituent
of the nitrile guests, which allows discrimination of this remote
structural difference that was not achieved by 1 and 2. As shown in Figures 4 and 5, the differences in 19F NMR of free
and bound complexes are within the range of <0.3 ppm, which is
smaller than those observed with 1 and 2, suggesting spatial proximity is crucial to induce shifts. Minimum 19F NMR shifts are observed for acetonitrile as a result of
its smaller size (Figures 4d and 5d). Interestingly, despite the smaller shifts produced, complexes 3 and 4 display improved resolution of benzonitriles
relative to complexes 1 and 2 as shown in
Figures 4k–o and 5k–o. Our collective results indicate it is possible to rationally
design sensors with the desired selectivity by optimizing the position
of the fluorine atoms. Simultaneous discrimination of diverse benzonitriles
in a mixture is further demonstrated by the well-dispersed peaks shown
in Figures 4b and 5b.
Figure 4
19F NMR spectra (64 scans) of complex 3 alone and mixtures
of complex 3 (1.0 mM in CDCl3) and different
analytes (2.0 mM): (a) complex 3 alone, (b) four aromatic
nitriles and propionitrile added to a solution
of 3 in CDCl3, (c) superimposition of the
spectra of complex 3 with each of the five nitriles from
(b) collected independently, (d)–(o) complex 3 bound to various nitriles.
Figure 5
19F NMR spectra (64 scans) of complex 4 alone
and mixtures of complex 4 (1.0 mM in CDCl3) and different analytes (2.0 mM): (a) complex 4 alone,
(b) four aromatic nitriles added to a solution of 4 in
CDCl3, (c) superimposition of the spectra of complex 4 with each of the four nitriles from (b) collected independently,
(d)–(o) complex 4 bound to various nitriles.
19F NMR spectra (64 scans) of complex 3 alone and mixtures
of complex 3 (1.0 mM in CDCl3) and different
analytes (2.0 mM): (a) complex 3 alone, (b) four aromatic
nitriles and propionitrile added to a solution
of 3 in CDCl3, (c) superimposition of the
spectra of complex 3 with each of the five nitriles from
(b) collected independently, (d)–(o) complex 3 bound to various nitriles.19F NMR spectra (64 scans) of complex 4 alone
and mixtures of complex 4 (1.0 mM in CDCl3) and different analytes (2.0 mM): (a) complex 4 alone,
(b) four aromatic nitriles added to a solution of 4 in
CDCl3, (c) superimposition of the spectra of complex 4 with each of the four nitriles from (b) collected independently,
(d)–(o) complex 4 bound to various nitriles.Multiple sensors with orthogonal
discriminatory properties allow
for higher analyte resolution through a combined analysis of signals
from multiple receptors. Figure 6 is a plot
using the 19F NMR differences observed with 1 and 4. As a result of the orthogonal selectivity imparted
by the spatial distribution variance, this combination provides better
resolution than that shown in Figure 3 wherein 1 and 2 were employed. Moreover, the resolution
can be further enhanced by using signals collected by a third receptor.
The use of 1, 2, and 4 enables
an interpretable 3D differentiation of all the analytes. As shown
in Figure 7, all aromatic nitriles appear below
the xy plane, benzyl nitriles give pronounced x values, and alkyl nitriles give smaller x values. Simple inspection of these figures reveals utility for the
facile classification of analytes.
Figure 6
2D scatter of analytes based on the shifts
of 19F resonances
upon bonding: x axis, 2-OCHF3 fluorine
(1) (−Δδ × 1000); y axis, 3,5-CF3 fluorine (4) (−Δδ
× 1000).
Figure 7
3D scatter of analytes
based on the shifts of 19F resonances
upon bonding: x axis, 3,5-CF3 fluorine
(4) (−Δδ × 1000); y axis, 2-OCF3 fluorine (1) (−Δδ × 1000); z axis, 2-CF3 fluorine (2) (−Δδ
× 1000).
2D scatter of analytes based on the shifts
of 19F resonances
upon bonding: x axis, 2-OCHF3 fluorine
(1) (−Δδ × 1000); y axis, 3,5-CF3 fluorine (4) (−Δδ
× 1000).3D scatter of analytes
based on the shifts of 19F resonances
upon bonding: x axis, 3,5-CF3 fluorine
(4) (−Δδ × 1000); y axis, 2-OCF3 fluorine (1) (−Δδ × 1000); z axis, 2-CF3 fluorine (2) (−Δδ
× 1000).
NMR Fingerprinting with a Single Receptor
The preceding
studies enable the development of a receptor with multiple nonequivalent
fluorine atoms that can fingerprint organic nitriles. In this regard,
in addition to pentafluorophenyl groups, we have also incorporated
a fluorine atom on the arylimido group, which has been shown to differentiate
the electron-donating ability of the bound analytes by 19F NMR shifts.[15] By design, the pentafluorophenyl
group of 5a spatially arranges fluorine groups in a polarizable
π-system to create an environment capable of differentiating
structurally similar analytes (Figure 1). The
NMR experiments were carried out similarly to those of complexes 1–4. As shown in Figure 8, the imido-fluorine of 5a appears
as a triplet at around −100 (t) ppm, and the peaks at −143
(dd), −156 (t), and −162 (m) ppm are identified as o-, p-, and m-fluorine,
respectively (Figure 8a). These distinctive
chemical shifts provide a multidimensional spectroscopic signature
without complexity from overlapping 19F NMR signals. Binding
of nitriles to 5a produces upfield shifts in the 19F NMR of the pentafluorophenyl group as a result of the shielding
effects of the encapsulated molecules. Alkyl nitriles with varying
chain length from acetonitrile to nonanenitrile display increasing
upfield shifts for the imido-fluorine which correlate
with the electron-donating ability of these molecules to the tungsten
center (Figure 8d–g), and the same trend
is observed for substituted aromatic nitriles (Figure 8k–n). Pronounced upfield shifts of m-19F signals are observed with aromatic nitriles and provide
a differentiation from the alkyl nitriles investigated (Figure 8k–o). In contrast, benzyl nitrile did not
induce a shift of m-19F signals, thereby
indicating the importance of the precise position of the aromatic
group in the molecular container (Figure 8i).
It is also notable that 4-iodobenzonitrile induces less pronounced
upfield shifts of m- and p-19F NMR signals as compared to benzonitrile (part n vs part k of Figure 8), indicating a downfield shifting
effect with halide substitution. This trend is also observed for 4-iodobenzyl
cyanide and 3-bromopropionitrile, which induce downfield shifts of m- and p-19F NMR signals. The
downfield shifts relative to the shifts for the uncomplexed receptor
are not surprising because only very small upfield shifts are produced
by their nonhalogenated analogues (part j vs part i and part g vs
part d of Figure 8). Electron-rich aromatic
nitriles produce a more pronounced upfield shift of m- and p-19F NMR signals as compared to
electron-deficient aromatic nitriles, and this trend is also displayed
by the shifts in the imido-19F NMR signals,
which are solely dependent upon the electron-donating ability of the
nitriles (Figure 1k–n). Owing to the
polarizable π-system, 5a is more sensitive to the
electronic properties of aromatic nitrile than 1–4. As a result of the multiplets of the 19F NMR,
the overlap of signals produced by each analyte is more likely in
the analysis of a complex mixture (Figure 8b).
Figure 8
19F NMR spectrum (typically 128 scans) of a mixture
of complex 5a (2 mM in CDCl3) and different
analytes (5.0 mM). (a) Five nitriles were added to a solution of 5a in CDCl3. (b) Superimposition of the spectrum
collected independently. 19F NMR spectra (typically 128
scans) of complex 5a alone and mixtures of complex 5a (2.0 mM in CDCl3) and different analytes (5.0
mM): (a) complex 5a alone, (b) five nitriles added to
a solution of 5a in CDCl3, (c) superimposition
of the spectra of complex 5a with each of the five nitriles
from (b) collected independently, (d)–(p) complex 5a bound to various nitriles.
19F NMR spectrum (typically 128 scans) of a mixture
of complex 5a (2 mM in CDCl3) and different
analytes (5.0 mM). (a) Five nitriles were added to a solution of 5a in CDCl3. (b) Superimposition of the spectrum
collected independently. 19F NMR spectra (typically 128
scans) of complex 5a alone and mixtures of complex 5a (2.0 mM in CDCl3) and different analytes (5.0
mM): (a) complex 5a alone, (b) five nitriles added to
a solution of 5a in CDCl3, (c) superimposition
of the spectra of complex 5a with each of the five nitriles
from (b) collected independently, (d)–(p) complex 5a bound to various nitriles.The selective detection/identification of insecticides is
important
considering the widespread usage and toxicity of these chemicals.
Cyanophos [O-(4-cyanophenyl) O,O-dimethyl phosphorothioate] is an organophosphorus-based
insecticide that is effective against various plant pests.[17] It is a powerful cholinesterase inhibitor and
represents a threat to human health. Traditional chemosensing methods
typically rely on bonding or reactions with the Lewis acidic phosphorus
group, which is not readily distinguished from structurally related
compounds.[18] In contrast, our method generates
a fingerprint that precisely distinguishes this compound from all
other analytes (Figure 8p). Notably, the characteristic
upshift of m-fluorine enables a fast assignment of
cyanophos as an aromatic nitrile. This method was able to provide
unambiguous detection of the cyanophos signals (S/N > 15) at an
analyte
concentration of 100 μM using a 400 MHz spectrometer and an
acquisition time of 24 min (800 scans) (for details, see Figure S1
in the Supporting Information).A
three-dimensional plot is shown in Figure 9, with the o-, p-, and m-19F NMR signals as the axes and the relative
shift of the imido-19F NMR signal represented
by the radius of a sphere. The highly dispersed data points demonstrated
the ability of 5a to resolve all the analytes. As expected,
nitriles with similar structures display 19F NMR signals
that are close to one another. For example, acetonitrile and propionitrile
(Figure 8d,e) induce similar but differentiated
responses. It should be mentioned that the radii of the spheres in
Figure 9 correlate with the shift of imido-fluorine and can further differentiate analytes that
produce similar spectral differences in the other 19F NMR
signals, such as ethyl (R)-4-cyano-3-hydroxybutyrate
(Figure 8h) and C8H17CN (Figure 8f).
Figure 9
3D scatter of analytes
based on the shifts of 19F resonances
upon bonding: x axis, o-19F (−Δδ × 1000); y axis, p-19F (−Δδ × 1000); z axis, m-19F (−Δδ
× 1000). The sphere radius is correlated to imido-19F (−Δδ × 1000) with a factor
of 0.04.
3D scatter of analytes
based on the shifts of 19F resonances
upon bonding: x axis, o-19F (−Δδ × 1000); y axis, p-19F (−Δδ × 1000); z axis, m-19F (−Δδ
× 1000). The sphere radius is correlated to imido-19F (−Δδ × 1000) with a factor
of 0.04.
Association Constants and
Detection Limits
The association
constants were measured in chloroform. The concentrations of free
and bound complexes are determined by the integration of the 19F NMR signal, and the concentration of free nitrile is calculated
accordingly. As shown in Table 1, the magnitude
of the bonding constant varies significantly toward different nitriles.
For 1 and 2, the constants decrease in the
sequence acetonitrile, benzonitrile, and benzyl nitrile. Significant
bonding enhancement of benzonitrile is observed with 4, 5, and 5a, indicating the favorable π–π
interactions between the phenyl ring and electron-deficient 3,5-bis(trifluoromethyl)phenyl
or pentafluorophenyl group. Changing the methyl group to fluorine
on the arylimido group is beneficial to the binding as a result of
the increased Lewis acidity of the tungsten center. It should be mentioned
that the dissociation of the internal bound ligand of a metalated
cavitand tends to be slow because of the isolation of the ligand from
the bulk solution. This explains why a relatively low binding constant
is accompanied by a slow exchange system.[19] Notably, with the association constants, the simultaneous and quantitative
measurements of multiple analytes can be achieved on the basis of
signal integrations (for details, see Figure S8 in the Supporting Information). According to eq 1, the ratio of bound to free analyte is equal to K[CalixW(NR)]. For the detection of analyte in the presence
of excess receptor, [CalixW(NR)] is the total complex concentration
employed in the analysis. This means, for example, about 45% of the
analyte is in the complexed form when a trace amount of benzonitrile
is detected in the presence of 2 M tungsten complex 1. Owing to the six equivalent fluorine atoms and singlet peak, the
detection limit of benzonitrile in the presence of 2 M 1 is determined to be down to 10 μM using a 400 MHz spectrometer
and an acquisition time of 24 min (800 scans) in contrast to the 100
μM detection limit of cyanophos obtained with 5a (for details, see Figure S7 in the Supporting
Information).
Table 1
Association Constants
(K/M–1) of Various Nitriles with
a Tungsten–Imido
Complexa
1
2
3
4
5
5a
K (CH3CN)
945
815
b
b
618
786
K (PhCN)
345
372
279
897
852
1360
K (PhCH2CN)
177
97
118
219
318
600
Determined by 19F NMR
in CDCl3. Three measurements at different concentrations
are taken, and the average is given in the table, error <15%.
Not determined because the
signals
overlap in both 1H NMR and 19F NMR.
Determined by 19F NMR
in CDCl3. Three measurements at different concentrations
are taken, and the average is given in the table, error <15%.Not determined because the
signals
overlap in both 1H NMR and 19F NMR.The robust sensing power is further
demonstrated by the analysis
of a complex mixture of various nitriles in the presence of an excess
amount of hexane, ethyl acetate, and acetone with 1.
As shown in Figure 10, noncoordinating analytes,
such as hexane, ethyl acetate, and acetone, did not give signals,
while various nitriles can be unambiguously identified simultaneously
even in nondeuterated solvent.
Figure 10
19F NMR spectrum (64 scans)
of a mixture of complex 1 (ca. 0.8 mM in CH2Cl2), various nitriles
(each ca. 1.6 mM), hexane (5 μL), ethyl acetate (5 μL),
and acetone (5 μL).
19F NMR spectrum (64 scans)
of a mixture of complex 1 (ca. 0.8 mM in CH2Cl2), various nitriles
(each ca. 1.6 mM), hexane (5 μL), ethyl acetate (5 μL),
and acetone (5 μL).The detection of pollution in water is crucial to environmental
monitoring. Although many sensing methods are capable of detecting
a specific target in domestic water, the analysis of a more complex
matrix, such as river water, is still challenging. To mimic a sample
in the environment, water taken from the Charles River between Boston
and Cambridge, MA, was contaminated with cyanophos at various concentrations.
To use a minimum amount of organic solvent, river water (5 mL) was
extracted with a solution of receptor 1 in dichloromethane
(2 M, 0.6 mL), and the resulting dichloromethane phase was analyzed
by 19F NMR. The detection limit of cyanophos is determined
to be 5 μM by using this method (for details, see Figure S10
in the Supporting Information). Enrichment
by extraction is often employed when detecting nanomolar range neutral
organic molecules in water. As the process is not selective, a complex
mixture with a number of components at much higher concentrations
than the target analyte is often obtained. To test our method in the
analysis of a mixture obtained from enrichment, river water (500 mL)
was extracted with dichloromethane (100 mL × 3) and concentrated.
The extract was then redissolved in a solution of receptor 1 in dichloromethane (2 M, 0.5 mL) and analyzed by 19F
NMR. Detection of cyanophos at 20 nM in river water was achieved by
this method (for details, see Figure S11 in the Supporting Information). It is worth noting that a number
of unidentified species at much higher concentrations than that of
cyanophos were observed in 1H NMR, which makes the identification
of cyanophos unsuccessful in 1H NMR (for details, see Figure
S12 in the Supporting Information). The
preceding studies are intended to illustrate that the method is sufficiently
robust for demanding applications. A more efficient extraction process
could be achieved by immobilization of 1 or analogues
in a concentrator/filter assembly.To gain more insight into
the transduction of the current method,
the X-ray single-crystal structures of 1, 2, and 5a were obtained. Interestingly, 2:CH3CN is found to be perfectly isostructural to 1:CH3CN, and the only difference is the OCF3 group is replaced by a CF3 group (Figure 11). This result suggests that it is valid to estimate
the structures of related complexes. Although the nonlinear geometry
of acetonitrile in 2:CH3CN is unusual, it
is not unprecedented and has been observed in a variety of metal complexes.[20] Another observation is that fluorinated groups
face inward for the cavity in 2:CH3CN whereas
the opposite is true for 2:PhCN. Probably as a result
of the larger size of benzonitrile, the cavity of calixarene expands
to fit the analyte. The discrete behaviors found in 2:CH3CN and 2:PhCN in the crystal structure
also shed light on the chemical shift induced with 2 wherein
alkyl nitrile produces a downfield shift whereas aromatic nitrile
induces an upfield shift (Figure 2). The distance
of tungsten to the nitrogen of the nitrile in 2:PhCN
is significantly longer than that of 2:CH3CN (2.310 Å vs 2.287 Å), suggesting a weaker bonding of
PhCN. This observation is consistent with the trend of association
constants found in Table 1. It should be mentioned
that the NMR signals are collected in solution; therefore, the shifts
are largely dependent on the average distance between the fluorine
atom and the analyte in all of the conformational isomers.
Figure 11
X-ray structures
of 1, 2, and 5a (1:1 cocrystal
with CH3CN or PhCN): black, carbon; green,
fluorine; blue, nitrogen; red, oxygen; purple, tungsten. Note: The
methyl groups of the acetonitriles in 1:CH3CN and 2:CH3CN are disordered about the crystallographic
2-fold axis.
X-ray structures
of 1, 2, and 5a (1:1 cocrystal
with CH3CN or PhCN): black, carbon; green,
fluorine; blue, nitrogen; red, oxygen; purple, tungsten. Note: The
methyl groups of the acetonitriles in 1:CH3CN and 2:CH3CN are disordered about the crystallographic
2-fold axis.
Conclusions
In
summary, we have demonstrated a new sensing scheme based on 19F NMR and the encapsulation of analytes with molecular containers.
The method collects extensive interactions between the analyte and
receptor/container to provide measurable signals with sufficient dimensionality
(information) to uniquely identify or “fingerprint”
analytes that have only small structural differences. The strategy
can be achieved either with an array of receptors or by incorporating
multiple nonequivalent fluorine atoms in a single receptor. This new
scheme allows for an informative and interpretable output and enables
a precise and simultaneous identification of multiple potential guest
molecules in a complex mixture. The structures we report herein are
only representative examples and can be extended to many other structural
scaffolds, including those targeting complex and/or larger biomolecular
species that cannot be readily identified by conventional analytical
methods (e.g., mass spectrometry). Critical to this latter prospect
is the development of receptors/probes that incorporate 19F groups that are sensitive to their environment and produce relatively
static complexes. We envision these more complex recognition elements
will produce powerful detection schemes relevant to environmental
and biomedical sensing.