Literature DB >> 22821196

Gas-phase hydration thermochemistry of sodiated and potassiated nucleic acid bases.

Henryk Wincel1.   

Abstract

Hydration reactions of sodiated and potassiated nucleic acid bases (uracil, thymine, cytosine, and adenine) produced by electrospray have been studied in a gas phase using the pulsed ion-beam high-pressure mass spectrometer. The thermochemical properties, ΔH(o)(n), ΔS(o)(n), and ΔG(o)(n), for the hydrated systems were obtained from hydration equilibrium measurement. The structural aspects of the hydrated complexes are discussed in conjunction with available literature data. The correlation between water binding energies in the hydrated complexes and the corresponding metal ion affinities of nucleobases suggests that a significant (if not dominant) amount of the canonical structure of cytosine undergoes tautomerization during electrospray ionization, and the thermochemical values for cationized cytosine probably correspond to a mixture of tautomeric complexes.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22821196      PMCID: PMC3414711          DOI: 10.1007/s13361-012-0436-5

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  42 in total

1.  The structure and dynamics of DNA in the gas phase.

Authors:  Manuel Rueda; Susana G Kalko; F Javier Luque; Modesto Orozco
Journal:  J Am Chem Soc       Date:  2003-07-02       Impact factor: 15.419

2.  Structures of alkali metal ion-adenine complexes and hydrated complexes by IRMPD spectroscopy and electronic structure calculations.

Authors:  Khadijeh Rajabi; Elizabeth A L Gillis; Travis D Fridgen
Journal:  J Phys Chem A       Date:  2010-03-18       Impact factor: 2.781

3.  Tautomerism of purines. I. N(7)H in equilibrium N(9)H equilibrium in adenine.

Authors:  M Dreyfus; G Dodin; O Bensaude; J E Dubois
Journal:  J Am Chem Soc       Date:  1975-04-30       Impact factor: 15.419

4.  On the existence of the H3 tautomer of adenine in aqueous solution. Rationalizations based on hybrid quantum mechanics/molecular mechanics predictions.

Authors:  Kestutis Aidas; Kurt V Mikkelsen; Jacob Kongsted
Journal:  Phys Chem Chem Phys       Date:  2009-11-27       Impact factor: 3.676

5.  Tautomerism in cytosine and 3-methylcytosine. A thermodynamic and kinetic study.

Authors:  M Dreyfus; O Bensaude; G Dodin; J E Dubois
Journal:  J Am Chem Soc       Date:  1976-09-29       Impact factor: 15.419

6.  Tautomers of cytosine and their excited electronic states: a matrix isolation spectroscopic and quantum chemical study.

Authors:  Gábor Bazsó; György Tarczay; Géza Fogarasi; Péter G Szalay
Journal:  Phys Chem Chem Phys       Date:  2011-01-14       Impact factor: 3.676

7.  Raman spectroscopic study of the tautomeric composition of adenine in water.

Authors:  Tatiana G Burova; Vladimir V Ermolenkov; Galina N Ten; Roman S Shcherbakov; Victor I Baranov; Igor K Lednev
Journal:  J Phys Chem A       Date:  2011-09-06       Impact factor: 2.781

8.  On the competition between water, sodium ions, and spermine in binding to DNA: a molecular dynamics computer simulation study.

Authors:  Nikolay Korolev; Alexander P Lyubartsev; Aatto Laaksonen; Lars Nordenskiöld
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

9.  Correlated ab initio study of nucleic acid bases and their tautomers in the gas phase, in a microhydrated environment and in aqueous solution. Part 4. Uracil and thymine.

Authors:  Jaroslav Rejnek; Michal Hanus; Martin Kabelác; Filip Ryjácek; Pavel Hobza
Journal:  Phys Chem Chem Phys       Date:  2005-05-07       Impact factor: 3.676

10.  Ultrafast excited-state dynamics of adenine and monomethylated adenines in solution: implications for the nonradiative decay mechanism.

Authors:  Boiko Cohen; Patrick M Hare; Bern Kohler
Journal:  J Am Chem Soc       Date:  2003-11-05       Impact factor: 15.419

View more
  2 in total

1.  Hydration energies of protonated and sodiated thiouracils.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2014-10-01       Impact factor: 3.109

2.  Microhydration of Deprotonated Nucleobases.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2016-05-13       Impact factor: 3.109

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.