Literature DB >> 21234503

Tautomers of cytosine and their excited electronic states: a matrix isolation spectroscopic and quantum chemical study.

Gábor Bazsó1, György Tarczay, Géza Fogarasi, Péter G Szalay.   

Abstract

We have measured the IR and UV spectra of cytosine in a low-temperature argon matrix. An attempt was made to determine the tautomeric ratios existing in the matrix, making use of the matrix-isolation IR spectrum and computed IR intensities of the tautomers in a least squares fitting procedure. The mole fractions are about 0.22 for oxo(-amino) form, 0.26 and 0.44 for the two rotamers, respectively, of the hydroxy(-amino) form and 0.08 for the (oxo-)imino tautomer. These ratios were then used to simulate the matrix-isolation UV spectrum as a composite of the individual spectra, the latter calculated ab initio at high levels of electron correlation theory. The agreement between simulated and experimental UV spectra seems satisfactory. This indicates that, in contrast to the solid state and solution spectra described up to now by the oxo(-amino) form alone, the reproduction of the matrix-isolation UV spectrum needs at least the hydroxy(-amino) and oxo(-amino) forms, and probably also the (oxo-)imino form.

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Year:  2011        PMID: 21234503     DOI: 10.1039/c0cp02354j

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  8 in total

1.  Homodimers of cytosine and 1-methylcytosine. A DFT study of geometry, relative stability and H-NMR shifts in gas-phase and selected solvents.

Authors:  Guvanchmyrat Paytakov; Leonid Gorb; Andriy Stepanyugin; Svitlana Samiylenko; Dmytro Hovorun; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2014-02-20       Impact factor: 1.810

2.  Stability and isomerization of complexes formed by metal ions and cytosine isomers in aqueous phase.

Authors:  Hongqi Ai; Jingjing Liu; Kwaichow Chan
Journal:  J Mol Model       Date:  2013-05-25       Impact factor: 1.810

3.  Theoretical investigation into the cooperativity effect between the intermolecular π∙π and H-bonding interactions in the curcumin∙cytosine∙H2O system.

Authors:  Jie Pan; Duan-Lin Cao; Fu-de Ren; Jian-Long Wang; Lu Yang
Journal:  J Mol Model       Date:  2018-09-28       Impact factor: 1.810

4.  Gas-phase hydration thermochemistry of sodiated and potassiated nucleic acid bases.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2012-07-21       Impact factor: 3.109

5.  Non-radiative deactivation of excited cytosine: probing of different DFT functionals and basis sets in solvents with different polarity.

Authors:  T D Cherneva; M M Todorova; R I Bakalska; E Horkel; V B Delchev
Journal:  J Mol Model       Date:  2022-09-09       Impact factor: 2.172

6.  Revealing Deactivation Pathways Hidden in Time-Resolved Photoelectron Spectra.

Authors:  Matthias Ruckenbauer; Sebastian Mai; Philipp Marquetand; Leticia González
Journal:  Sci Rep       Date:  2016-10-20       Impact factor: 4.379

7.  Nucleobases thin films deposited on nanostructured transparent conductive electrodes for optoelectronic applications.

Authors:  C Breazu; M Socol; N Preda; O Rasoga; A Costas; G Socol; G Petre; A Stanculescu
Journal:  Sci Rep       Date:  2021-04-06       Impact factor: 4.379

8.  Modeling the heating and cooling of a chromophore after photoexcitation.

Authors:  Elizete Ventura; Silmar Andrade do Monte; Mariana T do Casal; Max Pinheiro; Josene Maria Toldo; Mario Barbatti
Journal:  Phys Chem Chem Phys       Date:  2022-04-20       Impact factor: 3.945

  8 in total

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