Literature DB >> 22818515

RNA virus genetic robustness: possible causes and some consequences.

Santiago F Elena1.   

Abstract

In general terms, robustness is the capacity of biological systems to function in spite of genetic or environmental perturbations. The small and compacted genomes and high mutation rates of RNA viruses, as well as the ever-changing environments wherein they replicate, create the conditions for robustness to be advantageous. In this review, I will enumerate possible mechanisms by which viral populations may acquire robustness, distinguishing between mechanisms that are inherent to virus replication and population dynamics and those that result from the interaction with host factors. Then, I will move to review some evidences that RNA virus populations are robust indeed. Finally, I will comment on the implications of robustness for virus evolvability, the emergence of new viruses and the efficiency of lethal mutagenesis as an antiviral strategy.
Copyright © 2012 Elsevier B.V. All rights reserved.

Mesh:

Year:  2012        PMID: 22818515     DOI: 10.1016/j.coviro.2012.06.008

Source DB:  PubMed          Journal:  Curr Opin Virol        ISSN: 1879-6257            Impact factor:   7.090


  20 in total

1.  Mutational robustness and resilience of a replicative cis-element of RNA virus: Promiscuity, limitations, relevance.

Authors:  Maria A Prostova; Anatoly P Gmyl; Denis V Bakhmutov; Anna A Shishova; Elena V Khitrina; Marina S Kolesnikova; Marina V Serebryakova; Olga V Isaeva; Vadim I Agol
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

2.  Costs and benefits of mutational robustness in RNA viruses.

Authors:  Adi Stern; Simone Bianco; Ming Te Yeh; Caroline Wright; Kristin Butcher; Chao Tang; Rasmus Nielsen; Raul Andino
Journal:  Cell Rep       Date:  2014-08-07       Impact factor: 9.423

3.  Tautomerism provides a molecular explanation for the mutagenic properties of the anti-HIV nucleoside 5-aza-5,6-dihydro-2'-deoxycytidine.

Authors:  Deyu Li; Bogdan I Fedeles; Vipender Singh; Chunte Sam Peng; Katherine J Silvestre; Allison K Simi; Jeffrey H Simpson; Andrei Tokmakoff; John M Essigmann
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-28       Impact factor: 11.205

Review 4.  Emergency Services of Viral RNAs: Repair and Remodeling.

Authors:  Vadim I Agol; Anatoly P Gmyl
Journal:  Microbiol Mol Biol Rev       Date:  2018-03-14       Impact factor: 11.056

5.  A HTRF based competitive binding assay for screening specific inhibitors of HIV-1 capsid assembly targeting the C-Terminal domain of capsid.

Authors:  Da-Wei Zhang; Rong-Hua Luo; Lei Xu; Liu-Meng Yang; Xiao-Shuang Xu; Gregory J Bedwell; Alan N Engelman; Yong-Tang Zheng; Shan Chang
Journal:  Antiviral Res       Date:  2019-06-27       Impact factor: 5.970

Review 6.  The role of mutational robustness in RNA virus evolution.

Authors:  Adam S Lauring; Judith Frydman; Raul Andino
Journal:  Nat Rev Microbiol       Date:  2013-03-25       Impact factor: 60.633

Review 7.  Population Diversity and Collective Interactions during Influenza Virus Infection.

Authors:  Christopher B Brooke
Journal:  J Virol       Date:  2017-10-27       Impact factor: 5.103

8.  Uneven genetic robustness of HIV-1 integrase.

Authors:  Suzannah J Rihn; Joseph Hughes; Sam J Wilson; Paul D Bieniasz
Journal:  J Virol       Date:  2014-10-22       Impact factor: 5.103

9.  Why are viral genomes so fragile? The bottleneck hypothesis.

Authors:  Nono S C Merleau; Sophie Pénisson; Philip J Gerrish; Santiago F Elena; Matteo Smerlak
Journal:  PLoS Comput Biol       Date:  2021-07-08       Impact factor: 4.475

10.  Extreme genetic fragility of the HIV-1 capsid.

Authors:  Suzannah J Rihn; Sam J Wilson; Nick J Loman; Mudathir Alim; Saskia E Bakker; David Bhella; Robert J Gifford; Frazer J Rixon; Paul D Bieniasz
Journal:  PLoS Pathog       Date:  2013-06-20       Impact factor: 6.823

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