| Literature DB >> 22807867 |
Asma Mukhtar, M Nawaz Tahir, Misbahul Ain Khan, Abdul Qayyum Ather, Muhammad Naeem Khan.
Abstract
In the title compound, C(13)H(17)NO(3)S, the dihedral angles between the thio-phene ring and the ethyl ester and acetamide groups are 5.21 (13) and 10.06 (16)°, respectively. The cyclo-hezene ring adopts a half-chair conformation. An S(6) ring is formed due to an intra-molecular N-H⋯O hydrogen bond. In the crystal, mol-ecules are linked by C-H⋯O inter-actions between the tetra-hydro-1-benzothio-phene unit and the ethyl ester group, forming C(7) chains propagating along the b-axis direction.Entities:
Year: 2012 PMID: 22807867 PMCID: PMC3393310 DOI: 10.1107/S160053681202524X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H17NO3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1831 reflections |
| θ = 2.4–25.3° | |
| µ = 0.24 mm−1 | |
| β = 109.610 (1)° | Prism, colorless |
| 0.28 × 0.20 × 0.18 mm | |
| Bruker Kappa APEXII CCD diffractometer | 2389 independent reflections |
| Radiation source: fine-focus sealed tube | 1831 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.10 pixels mm-1 | θmax = 25.3°, θmin = 2.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 9994 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2389 reflections | (Δ/σ)max < 0.001 |
| 165 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| S1 | −0.07735 (6) | 0.14705 (4) | 0.26031 (7) | 0.0539 (2) | |
| O1 | 0.22774 (14) | −0.08502 (9) | 0.4124 (2) | 0.0570 (5) | |
| O2 | −0.31724 (17) | 0.09817 (13) | 0.0095 (2) | 0.0848 (8) | |
| O3 | 0.03140 (16) | −0.11247 (10) | 0.2017 (2) | 0.0646 (6) | |
| N1 | −0.15117 (16) | 0.00537 (11) | 0.0871 (2) | 0.0514 (6) | |
| C1 | 0.1049 (2) | −0.06486 (13) | 0.3047 (3) | 0.0471 (7) | |
| C2 | 0.06878 (18) | 0.01882 (12) | 0.3219 (2) | 0.0408 (6) | |
| C3 | 0.14704 (19) | 0.07906 (12) | 0.4432 (2) | 0.0414 (6) | |
| C4 | 0.2851 (2) | 0.06876 (13) | 0.5811 (3) | 0.0488 (7) | |
| C5 | 0.3212 (3) | 0.13991 (14) | 0.7081 (3) | 0.0653 (8) | |
| C6 | 0.2832 (3) | 0.21870 (14) | 0.6192 (3) | 0.0690 (9) | |
| C7 | 0.1317 (2) | 0.22493 (13) | 0.5254 (3) | 0.0591 (8) | |
| C8 | 0.0810 (2) | 0.14974 (12) | 0.4223 (3) | 0.0459 (7) | |
| C9 | −0.05484 (19) | 0.04848 (13) | 0.2159 (3) | 0.0444 (7) | |
| C10 | 0.2653 (3) | −0.16924 (14) | 0.4095 (4) | 0.0742 (10) | |
| C11 | 0.3917 (3) | −0.18249 (18) | 0.5583 (4) | 0.0926 (13) | |
| C12 | −0.2783 (2) | 0.03142 (17) | −0.0096 (3) | 0.0592 (9) | |
| C13 | −0.3644 (2) | −0.02882 (17) | −0.1363 (3) | 0.0729 (9) | |
| H1 | −0.12894 | −0.04227 | 0.06581 | 0.0616* | |
| H4A | 0.35340 | 0.06365 | 0.52467 | 0.0585* | |
| H4B | 0.28594 | 0.01977 | 0.64624 | 0.0585* | |
| H5A | 0.27501 | 0.13359 | 0.79324 | 0.0783* | |
| H5B | 0.41841 | 0.13940 | 0.77120 | 0.0783* | |
| H6A | 0.33036 | 0.22575 | 0.53537 | 0.0828* | |
| H6B | 0.31193 | 0.26133 | 0.70545 | 0.0828* | |
| H7A | 0.08553 | 0.23261 | 0.61017 | 0.0709* | |
| H7B | 0.11222 | 0.27086 | 0.44724 | 0.0709* | |
| H10A | 0.27966 | −0.18170 | 0.29995 | 0.0889* | |
| H10B | 0.19331 | −0.20356 | 0.42015 | 0.0889* | |
| H11A | 0.37805 | −0.16655 | 0.66514 | 0.1389* | |
| H11B | 0.46381 | −0.15119 | 0.54198 | 0.1389* | |
| H11C | 0.41548 | −0.23836 | 0.56466 | 0.1389* | |
| H13A | −0.41082 | −0.00295 | −0.24610 | 0.1095* | |
| H13B | −0.43007 | −0.05116 | −0.08977 | 0.1095* | |
| H13C | −0.30755 | −0.07092 | −0.15408 | 0.1095* |
| S1 | 0.0487 (3) | 0.0506 (4) | 0.0574 (4) | 0.0098 (3) | 0.0112 (3) | 0.0046 (3) |
| O1 | 0.0475 (8) | 0.0389 (9) | 0.0741 (10) | 0.0041 (7) | 0.0066 (7) | −0.0051 (7) |
| O2 | 0.0593 (11) | 0.0900 (15) | 0.0849 (13) | 0.0170 (10) | −0.0024 (9) | −0.0038 (11) |
| O3 | 0.0608 (10) | 0.0489 (10) | 0.0724 (10) | −0.0073 (8) | 0.0068 (8) | −0.0142 (8) |
| N1 | 0.0423 (10) | 0.0563 (12) | 0.0496 (10) | −0.0041 (8) | 0.0077 (8) | −0.0017 (9) |
| C1 | 0.0448 (12) | 0.0451 (13) | 0.0505 (12) | −0.0040 (10) | 0.0148 (10) | −0.0003 (10) |
| C2 | 0.0381 (10) | 0.0407 (12) | 0.0439 (11) | −0.0022 (9) | 0.0142 (8) | 0.0012 (9) |
| C3 | 0.0441 (11) | 0.0401 (12) | 0.0407 (10) | −0.0008 (9) | 0.0152 (9) | 0.0028 (9) |
| C4 | 0.0471 (12) | 0.0443 (12) | 0.0481 (12) | −0.0007 (9) | 0.0069 (9) | 0.0002 (10) |
| C5 | 0.0655 (15) | 0.0544 (15) | 0.0590 (14) | −0.0056 (12) | −0.0015 (12) | −0.0052 (12) |
| C6 | 0.0776 (17) | 0.0502 (15) | 0.0660 (15) | −0.0082 (12) | 0.0067 (13) | −0.0079 (12) |
| C7 | 0.0723 (16) | 0.0418 (14) | 0.0577 (13) | 0.0061 (11) | 0.0147 (12) | −0.0016 (10) |
| C8 | 0.0488 (12) | 0.0424 (12) | 0.0461 (11) | 0.0033 (9) | 0.0154 (9) | 0.0028 (10) |
| C9 | 0.0428 (11) | 0.0465 (12) | 0.0448 (11) | −0.0016 (9) | 0.0159 (9) | 0.0035 (9) |
| C10 | 0.0717 (17) | 0.0403 (14) | 0.103 (2) | 0.0095 (12) | 0.0192 (15) | −0.0085 (13) |
| C11 | 0.0626 (17) | 0.0620 (18) | 0.139 (3) | 0.0162 (14) | 0.0149 (18) | 0.0113 (18) |
| C12 | 0.0469 (13) | 0.0751 (18) | 0.0500 (13) | −0.0002 (12) | 0.0087 (10) | 0.0071 (12) |
| C13 | 0.0527 (14) | 0.096 (2) | 0.0562 (14) | −0.0106 (14) | 0.0001 (11) | 0.0007 (14) |
| S1—C8 | 1.731 (2) | C10—C11 | 1.474 (4) |
| S1—C9 | 1.714 (2) | C12—C13 | 1.499 (4) |
| O1—C1 | 1.328 (3) | C4—H4A | 0.9700 |
| O1—C10 | 1.459 (3) | C4—H4B | 0.9700 |
| O2—C12 | 1.211 (3) | C5—H5A | 0.9700 |
| O3—C1 | 1.218 (3) | C5—H5B | 0.9700 |
| N1—C9 | 1.382 (3) | C6—H6A | 0.9700 |
| N1—C12 | 1.364 (3) | C6—H6B | 0.9700 |
| N1—H1 | 0.8600 | C7—H7A | 0.9700 |
| C1—C2 | 1.463 (3) | C7—H7B | 0.9700 |
| C2—C9 | 1.378 (3) | C10—H10A | 0.9700 |
| C2—C3 | 1.449 (3) | C10—H10B | 0.9700 |
| C3—C4 | 1.506 (3) | C11—H11A | 0.9600 |
| C3—C8 | 1.346 (3) | C11—H11B | 0.9600 |
| C4—C5 | 1.531 (3) | C11—H11C | 0.9600 |
| C5—C6 | 1.485 (3) | C13—H13A | 0.9600 |
| C6—C7 | 1.509 (4) | C13—H13B | 0.9600 |
| C7—C8 | 1.499 (3) | C13—H13C | 0.9600 |
| C8—S1—C9 | 91.19 (10) | C4—C5—H5A | 109.00 |
| C1—O1—C10 | 115.95 (19) | C4—C5—H5B | 109.00 |
| C9—N1—C12 | 126.0 (2) | C6—C5—H5A | 109.00 |
| C9—N1—H1 | 117.00 | C6—C5—H5B | 109.00 |
| C12—N1—H1 | 117.00 | H5A—C5—H5B | 108.00 |
| O1—C1—O3 | 122.1 (2) | C5—C6—H6A | 109.00 |
| O3—C1—C2 | 124.3 (2) | C5—C6—H6B | 109.00 |
| O1—C1—C2 | 113.63 (18) | C7—C6—H6A | 109.00 |
| C1—C2—C9 | 119.95 (18) | C7—C6—H6B | 109.00 |
| C1—C2—C3 | 128.32 (17) | H6A—C6—H6B | 108.00 |
| C3—C2—C9 | 111.72 (18) | C6—C7—H7A | 110.00 |
| C2—C3—C8 | 111.88 (17) | C6—C7—H7B | 110.00 |
| C2—C3—C4 | 127.17 (18) | C8—C7—H7A | 110.00 |
| C4—C3—C8 | 120.95 (18) | C8—C7—H7B | 110.00 |
| C3—C4—C5 | 111.59 (19) | H7A—C7—H7B | 108.00 |
| C4—C5—C6 | 113.14 (19) | O1—C10—H10A | 110.00 |
| C5—C6—C7 | 111.6 (2) | O1—C10—H10B | 110.00 |
| C6—C7—C8 | 109.67 (18) | C11—C10—H10A | 110.00 |
| C3—C8—C7 | 126.2 (2) | C11—C10—H10B | 110.00 |
| S1—C8—C3 | 112.99 (16) | H10A—C10—H10B | 108.00 |
| S1—C8—C7 | 120.80 (16) | C10—C11—H11A | 109.00 |
| N1—C9—C2 | 125.09 (19) | C10—C11—H11B | 109.00 |
| S1—C9—N1 | 122.70 (16) | C10—C11—H11C | 109.00 |
| S1—C9—C2 | 112.22 (16) | H11A—C11—H11B | 109.00 |
| O1—C10—C11 | 107.6 (2) | H11A—C11—H11C | 109.00 |
| N1—C12—C13 | 115.0 (2) | H11B—C11—H11C | 109.00 |
| O2—C12—N1 | 121.4 (2) | C12—C13—H13A | 109.00 |
| O2—C12—C13 | 123.5 (2) | C12—C13—H13B | 109.00 |
| C3—C4—H4A | 109.00 | C12—C13—H13C | 109.00 |
| C3—C4—H4B | 109.00 | H13A—C13—H13B | 109.00 |
| C5—C4—H4A | 109.00 | H13A—C13—H13C | 110.00 |
| C5—C4—H4B | 109.00 | H13B—C13—H13C | 109.00 |
| H4A—C4—H4B | 108.00 | ||
| C9—S1—C8—C3 | −0.74 (18) | C9—C2—C3—C4 | 178.71 (19) |
| C9—S1—C8—C7 | −179.82 (19) | C9—C2—C3—C8 | −0.6 (2) |
| C8—S1—C9—N1 | −179.31 (19) | C1—C2—C9—S1 | 179.01 (15) |
| C8—S1—C9—C2 | 0.37 (17) | C1—C2—C9—N1 | −1.3 (3) |
| C10—O1—C1—O3 | −4.5 (3) | C3—C2—C9—S1 | 0.0 (2) |
| C10—O1—C1—C2 | 175.9 (2) | C3—C2—C9—N1 | 179.72 (19) |
| C1—O1—C10—C11 | −169.7 (2) | C2—C3—C4—C5 | −167.96 (19) |
| C12—N1—C9—S1 | −5.9 (3) | C8—C3—C4—C5 | 11.3 (3) |
| C12—N1—C9—C2 | 174.4 (2) | C2—C3—C8—S1 | 0.9 (2) |
| C9—N1—C12—O2 | 1.2 (4) | C2—C3—C8—C7 | 179.9 (2) |
| C9—N1—C12—C13 | −177.8 (2) | C4—C3—C8—S1 | −178.48 (15) |
| O1—C1—C2—C3 | −2.4 (3) | C4—C3—C8—C7 | 0.6 (3) |
| O1—C1—C2—C9 | 178.80 (19) | C3—C4—C5—C6 | −41.8 (3) |
| O3—C1—C2—C3 | 178.0 (2) | C4—C5—C6—C7 | 61.4 (3) |
| O3—C1—C2—C9 | −0.8 (3) | C5—C6—C7—C8 | −46.2 (3) |
| C1—C2—C3—C4 | −0.2 (3) | C6—C7—C8—S1 | −164.26 (17) |
| C1—C2—C3—C8 | −179.5 (2) | C6—C7—C8—C3 | 16.8 (3) |
| H··· | ||||
| N1—H1···O3 | 0.86 | 2.03 | 2.674 (2) | 131 |
| C7—H7 | 0.97 | 2.50 | 3.392 (3) | 153 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O3 | 0.86 | 2.03 | 2.674 (2) | 131 |
| C7—H7 | 0.97 | 2.50 | 3.392 (3) | 153 |
Symmetry code: (i) .