| Literature DB >> 21589467 |
Asma Mukhtar, M Nawaz Tahir, Misbahul Ain Khan, Muhammad Naeem Khan.
Abstract
The title compound, C(13)H(17)NO(5)S, is approximately planar (r.m.s. deviation for the non-H atoms = 0.055 Å). Its conformation is stabilized by N-H⋯O and C-H⋯O hydrogen bonds, which both generate S(6) rings. The crystal packing only features van der Waals contacts.Entities:
Year: 2010 PMID: 21589467 PMCID: PMC3011754 DOI: 10.1107/S1600536810045629
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H17NO5S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 1311 reflections |
| θ = 2.1–25.1° | |
| µ = 0.25 mm−1 | |
| β = 106.005 (7)° | Needle, orange |
| 0.25 × 0.10 × 0.08 mm | |
| Bruker Kappa APEXII CCD diffractometer | 2518 independent reflections |
| Radiation source: fine-focus sealed tube | 1311 reflections with |
| graphite | |
| Detector resolution: 8.20 pixels mm-1 | θmax = 25.1°, θmin = 2.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 10222 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2518 reflections | Δρmax = 0.25 e Å−3 |
| 186 parameters | Δρmin = −0.22 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.011 (2) |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| S1 | 0.31949 (8) | 0.0384 (2) | 0.49921 (6) | 0.0506 (5) | |
| O1 | 0.2674 (2) | 0.0997 (7) | 0.35864 (17) | 0.0745 (17) | |
| O2 | 0.1065 (2) | 0.7124 (7) | 0.48056 (18) | 0.0619 (12) | |
| O3 | 0.1245 (2) | 0.6438 (6) | 0.59347 (17) | 0.0568 (12) | |
| O4 | 0.4142 (3) | −0.1121 (7) | 0.6963 (2) | 0.0805 (17) | |
| O5 | 0.4407 (2) | −0.2748 (6) | 0.59982 (16) | 0.0583 (11) | |
| N1 | 0.1981 (2) | 0.3879 (7) | 0.4170 (2) | 0.0505 (16) | |
| C1 | 0.2371 (3) | 0.2886 (8) | 0.4826 (3) | 0.0431 (16) | |
| C2 | 0.2152 (3) | 0.3811 (9) | 0.5411 (2) | 0.0441 (17) | |
| C3 | 0.2680 (3) | 0.2433 (9) | 0.6015 (2) | 0.0448 (16) | |
| C4 | 0.3277 (3) | 0.0560 (9) | 0.5869 (2) | 0.0470 (17) | |
| C5 | 0.2156 (3) | 0.2958 (10) | 0.3575 (3) | 0.058 (2) | |
| C6 | 0.1661 (3) | 0.4472 (11) | 0.2930 (3) | 0.072 (2) | |
| C7 | 0.1450 (3) | 0.5918 (9) | 0.5342 (3) | 0.0504 (19) | |
| C8 | 0.0519 (3) | 0.8434 (10) | 0.5883 (3) | 0.0568 (19) | |
| C9 | 0.0353 (4) | 0.8550 (11) | 0.6579 (3) | 0.081 (2) | |
| C10 | 0.2625 (3) | 0.2958 (10) | 0.6742 (2) | 0.0622 (19) | |
| C11 | 0.3963 (3) | −0.1159 (10) | 0.6338 (3) | 0.0559 (19) | |
| C12 | 0.5140 (3) | −0.4391 (10) | 0.6418 (3) | 0.067 (2) | |
| C13 | 0.5539 (3) | −0.6035 (10) | 0.5932 (3) | 0.0692 (19) | |
| H1 | 0.15902 | 0.52060 | 0.41285 | 0.0604* | |
| H6A | 0.18642 | 0.38122 | 0.25496 | 0.1074* | |
| H6B | 0.17496 | 0.65304 | 0.29852 | 0.1074* | |
| H6C | 0.10496 | 0.40458 | 0.28401 | 0.1074* | |
| H8A | 0.00031 | 0.77509 | 0.55396 | 0.0687* | |
| H8B | 0.06655 | 1.03516 | 0.57495 | 0.0687* | |
| H9A | 0.08548 | 0.93427 | 0.69089 | 0.1219* | |
| H9B | 0.02430 | 0.66237 | 0.67177 | 0.1219* | |
| H9C | −0.01457 | 0.97565 | 0.65561 | 0.1219* | |
| H10A | 0.27447 | 0.49656 | 0.68603 | 0.0934* | |
| H10B | 0.30462 | 0.17622 | 0.70576 | 0.0934* | |
| H10C | 0.20497 | 0.24802 | 0.67713 | 0.0934* | |
| H12A | 0.49428 | −0.57346 | 0.67146 | 0.0802* | |
| H12B | 0.55670 | −0.30905 | 0.67064 | 0.0802* | |
| H13A | 0.57324 | −0.46835 | 0.56419 | 0.1038* | |
| H13B | 0.51108 | −0.73156 | 0.56500 | 0.1038* | |
| H13C | 0.60277 | −0.71498 | 0.61936 | 0.1038* |
| S1 | 0.0497 (8) | 0.0563 (7) | 0.0508 (9) | 0.0004 (6) | 0.0222 (6) | −0.0001 (6) |
| O1 | 0.081 (3) | 0.088 (3) | 0.057 (3) | 0.026 (2) | 0.023 (2) | −0.0013 (19) |
| O2 | 0.063 (2) | 0.076 (2) | 0.052 (2) | 0.0152 (18) | 0.025 (2) | 0.0064 (18) |
| O3 | 0.056 (2) | 0.068 (2) | 0.054 (2) | 0.0086 (16) | 0.0279 (18) | 0.0036 (16) |
| O4 | 0.095 (3) | 0.094 (3) | 0.050 (3) | 0.029 (2) | 0.016 (2) | 0.005 (2) |
| O5 | 0.055 (2) | 0.0638 (19) | 0.057 (2) | 0.0108 (16) | 0.0172 (18) | 0.0064 (16) |
| N1 | 0.054 (3) | 0.059 (2) | 0.044 (3) | 0.0083 (18) | 0.023 (2) | 0.003 (2) |
| C1 | 0.041 (3) | 0.047 (2) | 0.046 (3) | −0.005 (2) | 0.020 (2) | 0.002 (2) |
| C2 | 0.042 (3) | 0.049 (3) | 0.045 (3) | −0.004 (2) | 0.018 (2) | −0.005 (2) |
| C3 | 0.041 (3) | 0.050 (2) | 0.047 (3) | −0.009 (2) | 0.018 (3) | 0.000 (2) |
| C4 | 0.046 (3) | 0.054 (3) | 0.046 (3) | −0.006 (2) | 0.021 (2) | 0.002 (2) |
| C5 | 0.061 (4) | 0.067 (3) | 0.052 (4) | −0.007 (3) | 0.025 (3) | −0.001 (3) |
| C6 | 0.078 (4) | 0.094 (4) | 0.050 (4) | 0.005 (3) | 0.029 (3) | 0.005 (3) |
| C7 | 0.051 (3) | 0.051 (3) | 0.056 (4) | −0.012 (2) | 0.026 (3) | −0.004 (3) |
| C8 | 0.046 (3) | 0.065 (3) | 0.063 (4) | 0.009 (2) | 0.021 (3) | −0.002 (3) |
| C9 | 0.075 (4) | 0.114 (4) | 0.070 (4) | 0.016 (3) | 0.046 (3) | 0.001 (3) |
| C10 | 0.065 (4) | 0.078 (3) | 0.047 (3) | 0.005 (3) | 0.021 (3) | 0.000 (3) |
| C11 | 0.053 (3) | 0.057 (3) | 0.058 (4) | −0.002 (2) | 0.016 (3) | 0.000 (3) |
| C12 | 0.058 (4) | 0.070 (3) | 0.068 (4) | 0.010 (3) | 0.010 (3) | 0.010 (3) |
| C13 | 0.054 (3) | 0.076 (3) | 0.083 (4) | 0.016 (3) | 0.028 (3) | 0.008 (3) |
| S1—C1 | 1.709 (5) | C8—C9 | 1.498 (8) |
| S1—C4 | 1.738 (4) | C12—C13 | 1.510 (7) |
| O1—C5 | 1.219 (6) | C6—H6A | 0.9600 |
| O2—C7 | 1.220 (6) | C6—H6B | 0.9600 |
| O3—C7 | 1.344 (6) | C6—H6C | 0.9600 |
| O3—C8 | 1.458 (6) | C8—H8A | 0.9700 |
| O4—C11 | 1.212 (7) | C8—H8B | 0.9700 |
| O5—C11 | 1.331 (6) | C9—H9A | 0.9600 |
| O5—C12 | 1.452 (6) | C9—H9B | 0.9600 |
| N1—C1 | 1.375 (7) | C9—H9C | 0.9600 |
| N1—C5 | 1.371 (7) | C10—H10A | 0.9600 |
| N1—H1 | 0.8600 | C10—H10B | 0.9600 |
| C1—C2 | 1.386 (7) | C10—H10C | 0.9600 |
| C2—C3 | 1.424 (6) | C12—H12A | 0.9700 |
| C2—C7 | 1.458 (7) | C12—H12B | 0.9700 |
| C3—C10 | 1.511 (6) | C13—H13A | 0.9600 |
| C3—C4 | 1.374 (6) | C13—H13B | 0.9600 |
| C4—C11 | 1.464 (7) | C13—H13C | 0.9600 |
| C5—C6 | 1.494 (8) | ||
| C1—S1—C4 | 90.4 (3) | H6A—C6—H6B | 109.00 |
| C7—O3—C8 | 115.5 (4) | H6A—C6—H6C | 109.00 |
| C11—O5—C12 | 116.3 (4) | H6B—C6—H6C | 109.00 |
| C1—N1—C5 | 126.3 (4) | O3—C8—H8A | 110.00 |
| C1—N1—H1 | 117.00 | O3—C8—H8B | 110.00 |
| C5—N1—H1 | 117.00 | C9—C8—H8A | 110.00 |
| S1—C1—N1 | 122.1 (4) | C9—C8—H8B | 110.00 |
| N1—C1—C2 | 124.3 (4) | H8A—C8—H8B | 109.00 |
| S1—C1—C2 | 113.6 (4) | C8—C9—H9A | 109.00 |
| C1—C2—C7 | 119.3 (4) | C8—C9—H9B | 109.00 |
| C1—C2—C3 | 111.3 (4) | C8—C9—H9C | 109.00 |
| C3—C2—C7 | 129.4 (4) | H9A—C9—H9B | 109.00 |
| C2—C3—C10 | 125.4 (4) | H9A—C9—H9C | 109.00 |
| C2—C3—C4 | 112.2 (4) | H9B—C9—H9C | 109.00 |
| C4—C3—C10 | 122.4 (4) | C3—C10—H10A | 110.00 |
| C3—C4—C11 | 129.7 (4) | C3—C10—H10B | 109.00 |
| S1—C4—C11 | 117.7 (4) | C3—C10—H10C | 110.00 |
| S1—C4—C3 | 112.6 (3) | H10A—C10—H10B | 109.00 |
| O1—C5—N1 | 120.8 (5) | H10A—C10—H10C | 109.00 |
| O1—C5—C6 | 123.7 (5) | H10B—C10—H10C | 109.00 |
| N1—C5—C6 | 115.5 (4) | O5—C12—H12A | 110.00 |
| O2—C7—O3 | 121.4 (4) | O5—C12—H12B | 110.00 |
| O3—C7—C2 | 113.7 (4) | C13—C12—H12A | 110.00 |
| O2—C7—C2 | 124.9 (5) | C13—C12—H12B | 110.00 |
| O3—C8—C9 | 107.3 (4) | H12A—C12—H12B | 108.00 |
| O4—C11—O5 | 122.4 (5) | C12—C13—H13A | 109.00 |
| O4—C11—C4 | 125.6 (5) | C12—C13—H13B | 110.00 |
| O5—C11—C4 | 111.9 (4) | C12—C13—H13C | 110.00 |
| O5—C12—C13 | 107.3 (4) | H13A—C13—H13B | 109.00 |
| C5—C6—H6A | 110.00 | H13A—C13—H13C | 109.00 |
| C5—C6—H6B | 110.00 | H13B—C13—H13C | 109.00 |
| C5—C6—H6C | 109.00 | ||
| C4—S1—C1—N1 | 178.4 (4) | N1—C1—C2—C7 | 1.7 (7) |
| C4—S1—C1—C2 | −0.8 (4) | C1—C2—C3—C4 | 0.6 (6) |
| C1—S1—C4—C3 | 1.1 (4) | C1—C2—C3—C10 | 179.3 (4) |
| C1—S1—C4—C11 | −177.0 (4) | C7—C2—C3—C4 | 179.9 (5) |
| C8—O3—C7—O2 | 2.2 (6) | C7—C2—C3—C10 | −1.4 (8) |
| C8—O3—C7—C2 | −177.3 (4) | C1—C2—C7—O2 | −5.3 (7) |
| C7—O3—C8—C9 | 175.9 (4) | C1—C2—C7—O3 | 174.1 (4) |
| C12—O5—C11—O4 | −1.7 (7) | C3—C2—C7—O2 | 175.3 (5) |
| C12—O5—C11—C4 | 176.1 (4) | C3—C2—C7—O3 | −5.2 (7) |
| C11—O5—C12—C13 | 179.5 (4) | C2—C3—C4—S1 | −1.1 (5) |
| C5—N1—C1—S1 | 3.2 (6) | C2—C3—C4—C11 | 176.7 (5) |
| C5—N1—C1—C2 | −177.7 (4) | C10—C3—C4—S1 | −179.9 (3) |
| C1—N1—C5—O1 | 3.2 (7) | C10—C3—C4—C11 | −2.1 (8) |
| C1—N1—C5—C6 | −177.9 (4) | S1—C4—C11—O4 | 174.8 (4) |
| S1—C1—C2—C3 | 0.3 (5) | S1—C4—C11—O5 | −2.9 (5) |
| S1—C1—C2—C7 | −179.2 (3) | C3—C4—C11—O4 | −2.9 (8) |
| N1—C1—C2—C3 | −178.9 (4) | C3—C4—C11—O5 | 179.4 (4) |
| H··· | ||||
| N1—H1···O2 | 0.86 | 1.99 | 2.652 (5) | 133 |
| C10—H10B···O4 | 0.96 | 2.24 | 2.995 (6) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O2 | 0.86 | 1.99 | 2.652 (5) | 133 |
| C10—H10 | 0.96 | 2.24 | 2.995 (6) | 135 |