Literature DB >> 22806872

The use of FAME analyses to discriminate between different strains of Geotrichum klebahnii with different viabilities.

Thomas Schwarzenauer1, Philipp Lins, Christoph Reitschuler, Paul Illmer.   

Abstract

A considerable decline in viability of spray dried cells of Geotrichum klebahnii was observed and was attributed to an undefined alteration of the used strain. As common techniques were not able to distinguish the altered from the still viable strains, we used the fatty acid methyl ester (FAME) analysis. On the basis of FAME data we were able to discriminate the three strains under investigation. Especially the ratios of cis/trans fatty acid ratios and of saturated/unsaturated fatty acid were significantly reduced in the less viable strain, pointing to an increased stress level in this strain. These findings clearly show the applicability of the FAME analysis to detect strain alterations and that this method is therefore a suitable, fast and feasible tool for quality assurance.

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Year:  2011        PMID: 22806872     DOI: 10.1007/s11274-011-0847-7

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  10 in total

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Authors:  G Muyzer
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2.  A rapid and quantitative method for total fatty acid analysis of fungi and other biological samples.

Authors:  M Sönnichsen; B W Müller
Journal:  Lipids       Date:  1999-12       Impact factor: 1.880

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Authors:  Cornelia Malin; Paul Illmer
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4.  Genomic expression programs in the response of yeast cells to environmental changes.

Authors:  A P Gasch; P T Spellman; C M Kao; O Carmel-Harel; M B Eisen; G Storz; D Botstein; P O Brown
Journal:  Mol Biol Cell       Date:  2000-12       Impact factor: 4.138

5.  DNA fragments differing by single base-pair substitutions are separated in denaturing gradient gels: correspondence with melting theory.

Authors:  S G Fischer; L S Lerman
Journal:  Proc Natl Acad Sci U S A       Date:  1983-03       Impact factor: 11.205

Review 6.  Fatty acid synthesis and elongation in yeast.

Authors:  Oksana Tehlivets; Kim Scheuringer; Sepp D Kohlwein
Journal:  Biochim Biophys Acta       Date:  2006-07-21

7.  Survival and phospholipid Fatty Acid profiles of surface and subsurface bacteria in natural sediment microcosms.

Authors:  T L Kieft; E Wilch; K O'connor; D B Ringelberg; D C White
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

8.  From learning taxonomies to phylogenetic learning: integration of 16S rRNA gene data into FAME-based bacterial classification.

Authors:  Bram Slabbinck; Willem Waegeman; Peter Dawyndt; Paul De Vos; Bernard De Baets
Journal:  BMC Bioinformatics       Date:  2010-01-30       Impact factor: 3.169

9.  Phospholipid ester-linked fatty acid profile changes during nutrient deprivation of Vibrio cholerae: increases in the trans/cis ratio and proportions of cyclopropyl fatty acids.

Authors:  J B Guckert; M A Hood; D C White
Journal:  Appl Environ Microbiol       Date:  1986-10       Impact factor: 4.792

10.  Combined phospholipid biomarker-16S rRNA gene denaturing gradient gel electrophoresis analysis of bacterial diversity and physiological status in an intertidal microbial mat.

Authors:  Laura Villanueva; Antoni Navarrete; Jordi Urmeneta; David C White; Ricardo Guerrero
Journal:  Appl Environ Microbiol       Date:  2004-11       Impact factor: 4.792

  10 in total
  1 in total

1.  Microbial succession during thermophilic digestion: the potential of Methanosarcina sp.

Authors:  Paul Illmer; Christoph Reitschuler; Andreas Otto Wagner; Thomas Schwarzenauer; Philipp Lins
Journal:  PLoS One       Date:  2014-02-19       Impact factor: 3.240

  1 in total

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