Literature DB >> 22798797

N'-[(E)-4-Bromo-benzyl-idene]-1-benzofuran-2-carbohydrazide monohydrate.

Hoong-Kun Fun, Ching Kheng Quah, Balakrishna Kalluraya, M Babu.   

Abstract

The title compound, C(16)H(11)BrN(2)O(2)·H(2)O, exists in a trans conformation with respect to the N=C bond [1.2815 (14) Å] and the benzofuran ring system forms a dihedral angle of 2.96 (5)° with the benzene ring. In the crystal, the ketone O atom accepts two O-H⋯O and one C-H⋯O hydrogen bond, and the water O atom accepts an N-H⋯O inter-action. Together, these lead to infinite layers lying parallel to (100).

Entities:  

Year:  2012        PMID: 22798797      PMCID: PMC3393932          DOI: 10.1107/S1600536812026724

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and background to the biological activity of hydrazones, see: Fun et al. (2012a ▶,b ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C16H11BrN2O2·H2O M = 361.19 Monoclinic, a = 25.0594 (4) Å b = 4.6718 (1) Å c = 12.6166 (2) Å β = 99.175 (1)° V = 1458.16 (5) Å3 Z = 4 Mo Kα radiation μ = 2.83 mm−1 T = 100 K 0.41 × 0.22 × 0.13 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.390, T max = 0.708 22903 measured reflections 6458 independent reflections 6000 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.048 S = 1.00 6458 reflections 205 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.55 e Å−3 Δρmin = −0.24 e Å−3 Absolute structure: Flack (1983 ▶), 3029 Friedel pairs Flack parameter: 0.002 (3) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812026724/hb6850sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026724/hb6850Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812026724/hb6850Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H11BrN2O2·H2OF(000) = 728
Mr = 361.19Dx = 1.645 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 9978 reflections
a = 25.0594 (4) Åθ = 3.3–35.9°
b = 4.6718 (1) ŵ = 2.83 mm1
c = 12.6166 (2) ÅT = 100 K
β = 99.175 (1)°Block, colourless
V = 1458.16 (5) Å30.41 × 0.22 × 0.13 mm
Z = 4
Bruker SMART APEXII CCD diffractometer6458 independent reflections
Radiation source: fine-focus sealed tube6000 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
φ and ω scansθmax = 35.9°, θmin = 3.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −38→40
Tmin = 0.390, Tmax = 0.708k = −7→7
22903 measured reflectionsl = −20→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.021H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.048w = 1/[σ2(Fo2) + (0.0159P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max = 0.001
6458 reflectionsΔρmax = 0.55 e Å3
205 parametersΔρmin = −0.24 e Å3
2 restraintsAbsolute structure: Flack (1983), 3029 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.002 (3)
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.493770 (6)1.100705 (19)0.508751 (8)0.02217 (3)
O10.18964 (3)−0.55368 (16)0.27425 (6)0.01388 (14)
O20.23751 (3)−0.22894 (17)0.52806 (6)0.01613 (14)
N10.25775 (4)−0.12217 (17)0.36132 (8)0.01253 (15)
N20.29362 (4)0.08563 (17)0.40538 (8)0.01311 (15)
C10.15501 (5)−0.6274 (2)0.42754 (10)0.0167 (2)
H1A0.1499−0.61590.49880.020*
C20.12501 (5)−0.7988 (2)0.34457 (9)0.01525 (18)
C30.08115 (5)−0.9889 (3)0.33817 (10)0.0212 (2)
H3A0.0646−1.02530.39780.025*
C40.06318 (5)−1.1207 (2)0.24052 (10)0.0196 (2)
H4A0.0339−1.24550.23430.024*
C50.08847 (5)−1.0683 (2)0.15094 (11)0.0174 (2)
H5A0.0757−1.16160.08680.021*
C60.13193 (7)−0.8818 (2)0.15468 (11)0.0167 (2)
H6A0.1489−0.84860.09550.020*
C70.14821 (4)−0.7488 (2)0.25269 (9)0.01312 (17)
C80.19229 (4)−0.4854 (2)0.38103 (9)0.01323 (17)
C90.23162 (4)−0.2696 (2)0.42951 (9)0.01253 (17)
C100.32052 (4)0.2111 (2)0.34060 (9)0.01383 (17)
H10A0.31470.16280.26820.017*
C110.36048 (6)0.4314 (2)0.38081 (11)0.0136 (2)
C120.39181 (5)0.5549 (2)0.31113 (11)0.0176 (2)
H12A0.38600.50280.23910.021*
C130.43169 (5)0.7550 (2)0.34769 (10)0.0184 (2)
H13A0.45310.83320.30120.022*
C140.43889 (5)0.8351 (2)0.45464 (10)0.0167 (2)
C150.40692 (5)0.7233 (2)0.52486 (9)0.0175 (2)
H15A0.41160.78440.59590.021*
C160.36790 (5)0.5192 (2)0.48830 (9)0.01555 (19)
H16A0.34670.44100.53520.019*
O1W0.27065 (4)0.74269 (17)0.14979 (7)0.01805 (15)
H2W10.26950.88480.10770.010 (4)*
H1W10.25840.59150.12360.039 (6)*
H1N10.2547 (7)−0.166 (4)0.2920 (14)0.020 (4)*
U11U22U33U12U13U23
Br10.01396 (4)0.01463 (4)0.03562 (7)−0.00355 (5)−0.00306 (4)0.00589 (5)
O10.0141 (4)0.0144 (3)0.0133 (4)−0.0033 (2)0.0027 (3)−0.0009 (2)
O20.0209 (4)0.0149 (3)0.0130 (3)−0.0020 (3)0.0039 (3)−0.0014 (2)
N10.0136 (4)0.0121 (3)0.0119 (4)−0.0020 (3)0.0022 (3)−0.0012 (3)
N20.0126 (4)0.0113 (3)0.0150 (4)−0.0019 (3)0.0009 (3)−0.0012 (3)
C10.0201 (5)0.0172 (5)0.0136 (5)−0.0042 (3)0.0053 (4)−0.0019 (3)
C20.0153 (5)0.0148 (4)0.0160 (5)−0.0031 (3)0.0035 (4)−0.0005 (3)
C30.0224 (6)0.0227 (5)0.0197 (6)−0.0093 (4)0.0069 (4)−0.0013 (4)
C40.0179 (5)0.0197 (5)0.0209 (6)−0.0075 (4)0.0017 (4)−0.0007 (4)
C50.0183 (5)0.0177 (4)0.0152 (5)−0.0016 (3)0.0001 (4)−0.0015 (3)
C60.0183 (6)0.0197 (5)0.0123 (5)−0.0014 (4)0.0028 (4)0.0003 (4)
C70.0119 (4)0.0116 (4)0.0159 (5)−0.0013 (3)0.0025 (4)0.0008 (3)
C80.0145 (4)0.0122 (4)0.0128 (5)−0.0014 (3)0.0016 (4)−0.0019 (3)
C90.0127 (4)0.0111 (4)0.0139 (5)0.0001 (3)0.0022 (4)−0.0003 (3)
C100.0147 (5)0.0132 (4)0.0136 (5)−0.0003 (3)0.0023 (4)−0.0001 (3)
C110.0130 (5)0.0121 (4)0.0157 (5)0.0017 (3)0.0023 (4)0.0023 (3)
C120.0190 (5)0.0172 (4)0.0176 (5)−0.0006 (4)0.0061 (4)0.0020 (4)
C130.0163 (5)0.0167 (4)0.0232 (6)−0.0012 (3)0.0060 (4)0.0046 (4)
C140.0131 (5)0.0121 (4)0.0239 (6)−0.0006 (3)0.0004 (4)0.0041 (3)
C150.0170 (5)0.0168 (4)0.0178 (5)−0.0034 (3)0.0002 (4)0.0016 (4)
C160.0152 (5)0.0156 (4)0.0159 (5)−0.0030 (3)0.0024 (4)0.0006 (3)
O1W0.0251 (4)0.0160 (3)0.0129 (4)−0.0005 (3)0.0026 (3)0.0005 (3)
Br1—C141.8967 (11)C5—H5A0.9300
O1—C71.3757 (13)C6—C71.3860 (17)
O1—C81.3757 (13)C6—H6A0.9300
O2—C91.2431 (13)C8—C91.4730 (15)
N1—C91.3501 (14)C10—C111.4686 (17)
N1—N21.3783 (12)C10—H10A0.9300
N1—H1N10.890 (17)C11—C121.3938 (18)
N2—C101.2815 (14)C11—C161.4006 (18)
C1—C81.3537 (16)C12—C131.3923 (17)
C1—C21.4323 (16)C12—H12A0.9300
C1—H1A0.9300C13—C141.3841 (18)
C2—C71.3970 (15)C13—H13A0.9300
C2—C31.4054 (16)C14—C151.3879 (16)
C3—C41.3865 (18)C15—C161.3906 (16)
C3—H3A0.9300C15—H15A0.9300
C4—C51.4027 (19)C16—H16A0.9300
C4—H4A0.9300O1W—H2W10.8477
C5—C61.3895 (19)O1W—H1W10.8182
C7—O1—C8105.33 (8)C1—C8—C9128.15 (10)
C9—N1—N2116.97 (9)O1—C8—C9119.35 (9)
C9—N1—H1N1122.2 (12)O2—C9—N1124.56 (10)
N2—N1—H1N1120.5 (12)O2—C9—C8119.00 (10)
C10—N2—N1116.14 (9)N1—C9—C8116.41 (9)
C8—C1—C2105.98 (10)N2—C10—C11119.96 (10)
C8—C1—H1A127.0N2—C10—H10A120.0
C2—C1—H1A127.0C11—C10—H10A120.0
C7—C2—C3118.90 (10)C12—C11—C16119.23 (12)
C7—C2—C1105.87 (9)C12—C11—C10119.59 (12)
C3—C2—C1135.23 (11)C16—C11—C10121.17 (11)
C4—C3—C2118.16 (11)C13—C12—C11121.05 (12)
C4—C3—H3A120.9C13—C12—H12A119.5
C2—C3—H3A120.9C11—C12—H12A119.5
C3—C4—C5120.93 (11)C14—C13—C12118.66 (11)
C3—C4—H4A119.5C14—C13—H13A120.7
C5—C4—H4A119.5C12—C13—H13A120.7
C6—C5—C4122.31 (12)C13—C14—C15121.45 (11)
C6—C5—H5A118.8C13—C14—Br1120.14 (9)
C4—C5—H5A118.8C15—C14—Br1118.41 (9)
C7—C6—C5115.40 (12)C14—C15—C16119.56 (11)
C7—C6—H6A122.3C14—C15—H15A120.2
C5—C6—H6A122.3C16—C15—H15A120.2
O1—C7—C6125.38 (10)C15—C16—C11119.98 (11)
O1—C7—C2110.34 (9)C15—C16—H16A120.0
C6—C7—C2124.27 (10)C11—C16—H16A120.0
C1—C8—O1112.45 (9)H2W1—O1W—H1W1116.8
C9—N1—N2—C10175.83 (10)N2—N1—C9—O20.50 (15)
C8—C1—C2—C71.26 (13)N2—N1—C9—C8178.34 (9)
C8—C1—C2—C3−178.77 (14)C1—C8—C9—O29.58 (17)
C7—C2—C3—C40.58 (18)O1—C8—C9—O2−173.05 (9)
C1—C2—C3—C4−179.38 (13)C1—C8—C9—N1−168.39 (11)
C2—C3—C4—C50.73 (19)O1—C8—C9—N18.97 (14)
C3—C4—C5—C6−0.7 (2)N1—N2—C10—C11−178.76 (9)
C4—C5—C6—C7−0.66 (19)N2—C10—C11—C12176.26 (11)
C8—O1—C7—C6−178.42 (11)N2—C10—C11—C16−3.47 (17)
C8—O1—C7—C20.63 (11)C16—C11—C12—C132.60 (18)
C5—C6—C7—O1−178.99 (10)C10—C11—C12—C13−177.13 (11)
C5—C6—C7—C22.09 (18)C11—C12—C13—C14−1.58 (17)
C3—C2—C7—O1178.84 (10)C12—C13—C14—C15−0.80 (17)
C1—C2—C7—O1−1.19 (12)C12—C13—C14—Br1178.62 (9)
C3—C2—C7—C6−2.09 (18)C13—C14—C15—C162.11 (17)
C1—C2—C7—C6177.88 (11)Br1—C14—C15—C16−177.32 (9)
C2—C1—C8—O1−0.94 (13)C14—C15—C16—C11−1.05 (17)
C2—C1—C8—C9176.58 (10)C12—C11—C16—C15−1.26 (18)
C7—O1—C8—C10.21 (12)C10—C11—C16—C15178.47 (11)
C7—O1—C8—C9−177.55 (9)
D—H···AD—HH···AD···AD—H···A
O1W—H2W1···O2i0.852.002.7932 (11)157
O1W—H1W1···O2ii0.822.102.8987 (11)167
N1—H1N1···O1Wiii0.890 (17)1.947 (18)2.8108 (13)163.4 (17)
C6—H6A···O2iv0.932.533.3418 (18)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H2W1⋯O2i 0.852.002.7932 (11)157
O1W—H1W1⋯O2ii 0.822.102.8987 (11)167
N1—H1N1⋯O1W iii 0.890 (17)1.947 (18)2.8108 (13)163.4 (17)
C6—H6A⋯O2iv 0.932.533.3418 (18)146

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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