Literature DB >> 22785402

Validation of AclarusDx™, a blood-based transcriptomic signature for the diagnosis of Alzheimer's disease.

Pascale Fehlbaum-Beurdeley1, Olivier Sol, Laurent Désiré, Jacques Touchon, Thierry Dantoine, Martine Vercelletto, Audrey Gabelle, Anne-Charlotte Jarrige, Raphaël Haddad, Jean Christophe Lemarié, Weiyin Zhou, Harald Hampel, Richard Einstein, Bruno Vellas.   

Abstract

Biomarkers have gained an increased importance in the past years in helping physicians to diagnose Alzheimer's disease (AD). This study was designed to identify a blood-based, transcriptomic signature that can differentiate AD patients from control subjects. The performance of the signature was then evaluated for robustness in an independent blinded sample population. RNA was extracted from 177 blood samples (90 AD patients and 87 controls) and gene expression profiles were generated using the human Genome-Wide Splice Array™. These profiles were used to establish a signature to differentiate AD patients from controls. Subsequently, prediction results were optimized by establishing grey zone boundaries that discount prediction scores near the disease status threshold. Signature validation was then performed on a blinded independent cohort of 209 individuals (111 AD and 98 controls). The AclarusDx™ signature consists of 170 probesets which map to 136 annotated genes, a significant number of which are associated with inflammatory, gene expression, and cell death pathways. Additional signature genes are known to interact with pathways involved in amyloid and tau metabolism. The validation sample set, after removal of 45 individuals with prediction profile scores within the grey zone, consisted of 164 subjects. The AclarusDx™ performance on this validation cohort had a sensitivity of 81.3% (95% CI: [73.3%; 89.3%]); and a specificity of 67.1% (95% CI: [56.3%; 77.9%]). AclarusDx™ is a non-invasive blood-based transcriptomic test that, in combination with standard assessments, can provide physicians with objective information to support the diagnosis of AD.

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Year:  2012        PMID: 22785402     DOI: 10.3233/JAD-2012-120637

Source DB:  PubMed          Journal:  J Alzheimers Dis        ISSN: 1387-2877            Impact factor:   4.472


  15 in total

1.  Rare Variants and Transcriptomics in Alzheimer disease.

Authors:  Crystal Humphries; Martin A Kohli
Journal:  Curr Genet Med Rep       Date:  2014-06-01

2.  Blood methylomic signatures of presymptomatic dementia in elderly subjects with type 2 diabetes mellitus.

Authors:  Katie Lunnon; Rebecca G Smith; Itzik Cooper; Lior Greenbaum; Jonathan Mill; Michal Schnaider Beeri
Journal:  Neurobiol Aging       Date:  2014-12-24       Impact factor: 4.673

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Authors:  Kim Henriksen; Sid E O'Bryant; Harald Hampel; John Q Trojanowski; Thomas J Montine; Andreas Jeromin; Kaj Blennow; Anders Lönneborg; Tony Wyss-Coray; Holly Soares; Chantal Bazenet; Magnus Sjögren; William Hu; Simon Lovestone; Morten A Karsdal; Michael W Weiner
Journal:  Alzheimers Dement       Date:  2013-07-11       Impact factor: 21.566

Review 4.  Protein-based biomarkers in cerebrospinal fluid and blood for Alzheimer's disease.

Authors:  Yongyao Fu; Deming Zhao; Lifeng Yang
Journal:  J Mol Neurosci       Date:  2014-06-25       Impact factor: 3.444

Review 5.  Epigenetic studies in Alzheimer's disease: current findings, caveats, and considerations for future studies.

Authors:  Katie Lunnon; Jonathan Mill
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2013-09-13       Impact factor: 3.568

6.  Dysregulated Fc gamma receptor-mediated phagocytosis pathway in Alzheimer's disease: network-based gene expression analysis.

Authors:  Young Ho Park; Angela Hodges; Shannon L Risacher; Kuang Lin; Jae-Won Jang; Soyeon Ahn; SangYun Kim; Simon Lovestone; Andrew Simmons; Michael W Weiner; Andrew J Saykin; Kwangsik Nho
Journal:  Neurobiol Aging       Date:  2019-12-10       Impact factor: 4.673

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Journal:  Front Immunol       Date:  2021-06-14       Impact factor: 7.561

Review 8.  Developing novel blood-based biomarkers for Alzheimer's disease.

Authors:  Heather M Snyder; Maria C Carrillo; Francine Grodstein; Kim Henriksen; Andreas Jeromin; Simon Lovestone; Michelle M Mielke; Sid O'Bryant; Manual Sarasa; Magnus Sjøgren; Holly Soares; Jessica Teeling; Eugenia Trushina; Malcolm Ward; Tim West; Lisa J Bain; Diana W Shineman; Michael Weiner; Howard M Fillit
Journal:  Alzheimers Dement       Date:  2014-01       Impact factor: 21.566

9.  Methylomic profiling implicates cortical deregulation of ANK1 in Alzheimer's disease.

Authors:  Katie Lunnon; Rebecca Smith; Eilis Hannon; Philip L De Jager; Gyan Srivastava; Manuela Volta; Claire Troakes; Safa Al-Sarraj; Joe Burrage; Ruby Macdonald; Daniel Condliffe; Lorna W Harries; Pavel Katsel; Vahram Haroutunian; Zachary Kaminsky; Catharine Joachim; John Powell; Simon Lovestone; David A Bennett; Leonard C Schalkwyk; Jonathan Mill
Journal:  Nat Neurosci       Date:  2014-08-17       Impact factor: 24.884

10.  A novel multi-tissue RNA diagnostic of healthy ageing relates to cognitive health status.

Authors:  Sanjana Sood; Iain J Gallagher; Katie Lunnon; Eric Rullman; Aoife Keohane; Hannah Crossland; Bethan E Phillips; Tommy Cederholm; Thomas Jensen; Luc J C van Loon; Lars Lannfelt; William E Kraus; Philip J Atherton; Robert Howard; Thomas Gustafsson; Angela Hodges; James A Timmons
Journal:  Genome Biol       Date:  2015-09-07       Impact factor: 13.583

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