Literature DB >> 22773645

Unexpected specificity of interspecies cobamide transfer from Geobacter spp. to organohalide-respiring Dehalococcoides mccartyi strains.

Jun Yan1, Kirsti M Ritalahti, Darlene D Wagner, Frank E Löffler.   

Abstract

Dehalococcoides mccartyi strains conserve energy from reductive dechlorination reactions catalyzed by corrinoid-dependent reductive dehalogenase enzyme systems. Dehalococcoides lacks the ability for de novo corrinoid synthesis, and pure cultures require the addition of cyanocobalamin (vitamin B(12)) for growth. In contrast, Geobacter lovleyi, which dechlorinates tetrachloroethene to cis-1,2-dichloroethene (cis-DCE), and the nondechlorinating species Geobacter sulfurreducens have complete sets of cobamide biosynthesis genes and produced 12.9 ± 2.4 and 24.2 ± 5.8 ng of extracellular cobamide per liter of culture suspension, respectively, during growth with acetate and fumarate in a completely synthetic medium. G. lovleyi-D. mccartyi strain BAV1 or strain FL2 cocultures provided evidence for interspecies corrinoid transfer, and cis-DCE was dechlorinated to vinyl chloride and ethene concomitant with Dehalococcoides growth. In contrast, negligible increase in Dehalococcoides 16S rRNA gene copies and insignificant dechlorination occurred in G. sulfurreducens-D. mccartyi strain BAV1 or strain FL2 cocultures. Apparently, G. lovleyi produces a cobamide that complements Dehalococcoides' nutritional requirements, whereas G. sulfurreducens does not. Interestingly, Dehalococcoides dechlorination activity and growth could be restored in G. sulfurreducens-Dehalococcoides cocultures by adding 10 μM 5',6'-dimethylbenzimidazole. Observations made with the G. sulfurreducens-Dehalococcoides cocultures suggest that the exchange of the lower ligand generated a cobalamin, which supported Dehalococcoides activity. These findings have implications for in situ bioremediation and suggest that the corrinoid metabolism of Dehalococcoides must be understood to faithfully predict, and possibly enhance, reductive dechlorination activities.

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Year:  2012        PMID: 22773645      PMCID: PMC3426716          DOI: 10.1128/AEM.01535-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  35 in total

Review 1.  Coenzyme B12 (cobalamin)-dependent enzymes.

Authors:  E N Marsh
Journal:  Essays Biochem       Date:  1999       Impact factor: 8.000

2.  Trichloroethene reductive dehalogenase from Dehalococcoides ethenogenes: sequence of tceA and substrate range characterization.

Authors:  J K Magnuson; M F Romine; D R Burris; M T Kingsley
Journal:  Appl Environ Microbiol       Date:  2000-12       Impact factor: 4.792

3.  The cobinamide amidohydrolase (cobyric acid-forming) CbiZ enzyme: a critical activity of the cobamide remodelling system of Rhodobacter sphaeroides.

Authors:  Michael J Gray; Jorge C Escalante-Semerena
Journal:  Mol Microbiol       Date:  2009-11-02       Impact factor: 3.501

4.  Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and Europe.

Authors:  Edwin R Hendrickson; Jo Ann Payne; Roslyn M Young; Mark G Starr; Michael P Perry; Stephen Fahnestock; David E Ellis; Richard C Ebersole
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

5.  Identification and transcriptional analysis of trans-DCE-producing reductive dehalogenases in Dehalococcoides species.

Authors:  Wai Ling Chow; Dan Cheng; Shanquan Wang; Jianzhong He
Journal:  ISME J       Date:  2010-04-01       Impact factor: 10.302

6.  Reductive dechlorination of tetrachloroethene to ethene by a two-component enzyme pathway.

Authors:  J K Magnuson; R V Stern; J M Gossett; S H Zinder; D R Burris
Journal:  Appl Environ Microbiol       Date:  1998-04       Impact factor: 4.792

7.  Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi.

Authors:  Frank E Löffler; Jun Yan; Kirsti M Ritalahti; Lorenz Adrian; Elizabeth A Edwards; Konstantinos T Konstantinidis; Jochen A Müller; Heather Fullerton; Stephen H Zinder; Alfred M Spormann
Journal:  Int J Syst Evol Microbiol       Date:  2012-04-27       Impact factor: 2.747

8.  Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium.

Authors:  Jianzhong He; Kirsti M Ritalahti; Kun-Lin Yang; Stephen S Koenigsberg; Frank E Löffler
Journal:  Nature       Date:  2003-07-03       Impact factor: 49.962

9.  Complete detoxification of vinyl chloride by an anaerobic enrichment culture and identification of the reductively dechlorinating population as a Dehalococcoides species.

Authors:  Jianzhong He; Kirsti M Ritalahti; Michael R Aiello; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2003-02       Impact factor: 4.792

10.  Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae.

Authors:  Darlene D Wagner; Laura A Hug; Janet K Hatt; Melissa R Spitzmiller; Elizabeth Padilla-Crespo; Kirsti M Ritalahti; Elizabeth A Edwards; Konstantinos T Konstantinidis; Frank E Löffler
Journal:  BMC Genomics       Date:  2012-05-22       Impact factor: 3.969

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  41 in total

1.  Temporal abundance and activity trends of vinyl chloride (VC)-degrading bacteria in a dilute VC plume at Naval Air Station Oceana.

Authors:  Yi Liang; Laura J Cook; Timothy E Mattes
Journal:  Environ Sci Pollut Res Int       Date:  2017-04-11       Impact factor: 4.223

2.  Synthetic microbial consortia for biosynthesis and biodegradation: promises and challenges.

Authors:  Shun Che; Yujie Men
Journal:  J Ind Microbiol Biotechnol       Date:  2019-07-05       Impact factor: 3.346

3.  Structural dynamics and transcriptomic analysis of Dehalococcoides mccartyi within a TCE-Dechlorinating community in a completely mixed flow reactor.

Authors:  Xinwei Mao; Benoit Stenuit; Julien Tremblay; Ke Yu; Susannah G Tringe; Lisa Alvarez-Cohen
Journal:  Water Res       Date:  2019-04-19       Impact factor: 11.236

4.  PCB dechlorination hotspots and reductive dehalogenase genes in sediments from a contaminated wastewater lagoon.

Authors:  Timothy E Mattes; Jessica M Ewald; Yi Liang; Andres Martinez; Andrew Awad; Patrick Richards; Keri C Hornbuckle; Jerald L Schnoor
Journal:  Environ Sci Pollut Res Int       Date:  2017-08-12       Impact factor: 4.223

5.  Identification of specific corrinoids reveals corrinoid modification in dechlorinating microbial communities.

Authors:  Yujie Men; Erica C Seth; Shan Yi; Terence S Crofts; Robert H Allen; Michiko E Taga; Lisa Alvarez-Cohen
Journal:  Environ Microbiol       Date:  2014-06-02       Impact factor: 5.491

6.  Functional heterologous production of reductive dehalogenases from Desulfitobacterium hafniense strains.

Authors:  Anita Mac Nelly; Marco Kai; Aleš Svatoš; Gabriele Diekert; Torsten Schubert
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

7.  Sustainable growth of Dehalococcoides mccartyi 195 by corrinoid salvaging and remodeling in defined lactate-fermenting consortia.

Authors:  Yujie Men; Erica C Seth; Shan Yi; Robert H Allen; Michiko E Taga; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2014-01-24       Impact factor: 4.792

8.  Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions.

Authors:  Yujie Men; Ke Yu; Jacob Bælum; Ying Gao; Julien Tremblay; Emmanuel Prestat; Ben Stenuit; Susannah G Tringe; Janet Jansson; Tong Zhang; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

9.  Selective Utilization of Benzimidazolyl-Norcobamides as Cofactors by the Tetrachloroethene Reductive Dehalogenase of Sulfurospirillum multivorans.

Authors:  Sebastian Keller; Cindy Kunze; Martin Bommer; Christian Paetz; Riya C Menezes; Aleš Svatoš; Holger Dobbek; Torsten Schubert
Journal:  J Bacteriol       Date:  2018-03-26       Impact factor: 3.490

10.  Organic cofactors in the metabolism of Dehalococcoides mccartyi strains.

Authors:  Christian J Schipp; Ernest Marco-Urrea; Anja Kublik; Jana Seifert; Lorenz Adrian
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

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