Literature DB >> 22767235

The true core of RNA silencing revealed.

Hiroshi M Sasaki, Yukihide Tomari.   

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Year:  2012        PMID： 22767235     DOI： 10.1038/nsmb.2302

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


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  39 in total

1.  In vitro assembly of plant RNA-induced silencing complexes facilitated by molecular chaperone HSP90.

Authors:  Taichiro Iki; Manabu Yoshikawa; Masaki Nishikiori; Mauren C Jaudal; Eiko Matsumoto-Yokoyama; Ichiro Mitsuhara; Tetsuo Meshi; Masayuki Ishikawa
Journal:  Mol Cell       Date:  2010-06-03       Impact factor: 17.970

2.  Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.

Authors:  Filipp Frank; Nahum Sonenberg; Bhushan Nagar
Journal:  Nature       Date:  2010-05-26       Impact factor: 49.962

3.  Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis.

Authors:  Marcin Nowotny; Sergei A Gaidamakov; Robert J Crouch; Wei Yang
Journal:  Cell       Date:  2005-07-01       Impact factor: 41.582

4.  Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage.

Authors:  Yu-Ren Yuan; Yi Pei; Jin-Biao Ma; Vitaly Kuryavyi; Maria Zhadina; Gunter Meister; Hong-Ying Chen; Zbigniew Dauter; Thomas Tuschl; Dinshaw J Patel
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

5.  Recognition of 2'-O-methylated 3'-end of piRNA by the PAZ domain of a Piwi protein.

Authors:  Bernd Simon; John P Kirkpatrick; Stephanie Eckhardt; Michael Reuter; Elsa A Rocha; Miguel A Andrade-Navarro; Peter Sehr; Ramesh S Pillai; Teresa Carlomagno
Journal:  Structure       Date:  2011-01-20       Impact factor: 5.006

6.  Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein.

Authors:  Jin-Biao Ma; Yu-Ren Yuan; Gunter Meister; Yi Pei; Thomas Tuschl; Dinshaw J Patel
Journal:  Nature       Date:  2005-03-31       Impact factor: 49.962

7.  Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.

Authors:  Yuan Tian; Dhirendra K Simanshu; Jin-Biao Ma; Dinshaw J Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-30       Impact factor: 11.205

8.  Structure and conserved RNA binding of the PAZ domain.

Authors:  Kelley S Yan; Sherry Yan; Amjad Farooq; Arnold Han; Lei Zeng; Ming-Ming Zhou
Journal:  Nature       Date:  2003-11-16       Impact factor: 49.962

9.  An alternative mode of microRNA target recognition.

Authors:  Sung Wook Chi; Gregory J Hannon; Robert B Darnell
Journal:  Nat Struct Mol Biol       Date:  2012-02-12       Impact factor: 15.369

10.  Enhancement of the seed-target recognition step in RNA silencing by a PIWI/MID domain protein.

Authors:  James S Parker; Eneida A Parizotto; Muhan Wang; S Mark Roe; David Barford
Journal:  Mol Cell       Date:  2009-01-30       Impact factor: 17.970
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  9 in total

Review 1.  New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing.

Authors:  Alexander Maxwell Burroughs; Yoshinari Ando; L Aravind
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-12-05       Impact factor: 9.957

2.  Single-molecule FRET supports the two-state model of Argonaute action.

Authors:  Adrian Zander; Phil Holzmeister; Daniel Klose; Philip Tinnefeld; Dina Grohmann
Journal:  RNA Biol       Date:  2013-12-20       Impact factor: 4.652

3.  Mechanisms that impact microRNA stability in plants.

Authors:  Yuanyuan Zhao; Beixin Mo; Xuemi Chen
Journal:  RNA Biol       Date:  2012-09-20       Impact factor: 4.652

4.  The making of a slicer: activation of human Argonaute-1.

Authors:  Christopher R Faehnle; Elad Elkayam; Astrid D Haase; Gregory J Hannon; Leemor Joshua-Tor
Journal:  Cell Rep       Date:  2013-06-06       Impact factor: 9.423

5.  Markov State Models Reveal a Two-Step Mechanism of miRNA Loading into the Human Argonaute Protein: Selective Binding followed by Structural Re-arrangement.

Authors:  Hanlun Jiang; Fu Kit Sheong; Lizhe Zhu; Xin Gao; Julie Bernauer; Xuhui Huang
Journal:  PLoS Comput Biol       Date:  2015-07-16       Impact factor: 4.475

6.  Mg2+ effect on argonaute and RNA duplex by molecular dynamics and bioinformatics implications.

Authors:  Seungyoon Nam; Hyojung Ryu; Won-joon Son; Yon Hui Kim; Kyung Tae Kim; Curt Balch; Kenneth P Nephew; Jinhyuk Lee
Journal:  PLoS One       Date:  2014-10-17       Impact factor: 3.240

Review 7.  DNA silencing by prokaryotic Argonaute proteins adds a new layer of defense against invading nucleic acids.

Authors:  Sarah Willkomm; Kira S Makarova; Dina Grohmann
Journal:  FEMS Microbiol Rev       Date:  2018-05-01       Impact factor: 16.408

8.  Critical role of backbone coordination in the mRNA recognition by RNA induced silencing complex.

Authors:  Lizhe Zhu; Hanlun Jiang; Siqin Cao; Ilona Christy Unarta; Xin Gao; Xuhui Huang
Journal:  Commun Biol       Date:  2021-11-30

9.  Time-Resolved Small RNA Sequencing Unravels the Molecular Principles of MicroRNA Homeostasis.

Authors:  Brian Reichholf; Veronika A Herzog; Nina Fasching; Raphael A Manzenreither; Ivica Sowemimo; Stefan L Ameres
Journal:  Mol Cell       Date:  2019-07-23       Impact factor: 17.970
  9 in total

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