Literature DB >> 22760641

On-chip bioorthogonal chemistry enables immobilization of in situ modified nanoparticles and small molecules for label-free monitoring of protein binding and reaction kinetics.

C Tassa1, M Liong, S Hilderbrand, J E Sandler, T Reiner, E J Keliher, R Weissleder, S Y Shaw.   

Abstract

Efficient methods to immobilize small molecules under continuous-flow microfluidic conditions would greatly improve label-free molecular interaction studies using biosensor technology. At present, small-molecule immobilization chemistries require special conditions and in many cases must be performed outside the detector and microfluidic system where real-time monitoring is not possible. Here, we have developed and optimized a method for on-chip bioorthogonal chemistry that enables rapid, reversible immobilization of small molecules with control over orientation and immobilization density, and apply this technique to surface plasmon resonance (SPR) studies. Immobilized small molecules reverse the orientation of canonical SPR interaction studies, and also enable a variety of new SPR applications including on-chip assembly and interaction studies of multicomponent structures, such as functionalized nanoparticles, and measurement of bioorthogonal reaction rates. We use this approach to demonstrate that on-chip assembled functionalized nanoparticles show a preserved ability to interact with their target protein, and to measure rapid bioorthogonal reaction rates with k(2) > 10(3) M(-1) s(-1). This method offers multiple benefits for microfluidic biological applications, including rapid screening of targeted nanoparticles with vastly decreased nanoparticle synthetic requirements, robust immobilization chemistry in the presence of serum, and a continuous flow technique that mimics biologic contexts better than current methods used to measure bioorthogonal reaction kinetics such as NMR or UV-vis spectroscopy (e.g., stopped flow kinetics). Taken together, this approach constitutes a flexible and powerful technique for evaluating a wide variety of reactions and intermolecular interactions for in vitro or in vivo applications.

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Year:  2012        PMID: 22760641      PMCID: PMC3411869          DOI: 10.1039/c2lc40337d

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  55 in total

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4.  Identifying the proteins to which small-molecule probes and drugs bind in cells.

Authors:  Shao-En Ong; Monica Schenone; Adam A Margolin; Xiaoyu Li; Kathy Do; Mary K Doud; D R Mani; Letian Kuai; Xiang Wang; John L Wood; Nicola J Tolliday; Angela N Koehler; Lisa A Marcaurelle; Todd R Golub; Robert J Gould; Stuart L Schreiber; Steven A Carr
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-02       Impact factor: 11.205

5.  Specific or nonspecific protein-polyphenol interactions? Discrimination in real time by surface plasmon resonance.

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6.  The evolution of the protein corona around nanoparticles: a test study.

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8.  Bioorthogonal probes for polo-like kinase 1 imaging and quantification.

Authors:  Ghyslain Budin; Katherine S Yang; Thomas Reiner; Ralph Weissleder
Journal:  Angew Chem Int Ed Engl       Date:  2011-08-24       Impact factor: 15.336

9.  Tetrazine-based cycloadditions: application to pretargeted live cell imaging.

Authors:  Neal K Devaraj; Ralph Weissleder; Scott A Hilderbrand
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10.  Fast and sensitive pretargeted labeling of cancer cells through a tetrazine/trans-cyclooctene cycloaddition.

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2.  Bioorthogonal approach to identify unsuspected drug targets in live cells.

Authors:  Katherine S Yang; Ghyslain Budin; Carlos Tassa; Olivier Kister; Ralph Weissleder
Journal:  Angew Chem Int Ed Engl       Date:  2013-08-19       Impact factor: 15.336

3.  Nanoparticles for Improving Cancer Diagnosis.

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4.  Microfluidic on-chip capture-cycloaddition reaction to reversibly immobilize small molecules or multi-component structures for biosensor applications.

Authors:  Carlos Tassa; Monty Liong; Scott Hilderbrand; Jason E Sandler; Thomas Reiner; Edmund J Keliher; Ralph Weissleder; Stanley Y Shaw
Journal:  J Vis Exp       Date:  2013-09-23       Impact factor: 1.355

5.  The glycosylation-dependent interaction of perlecan core protein with LDL: implications for atherosclerosis.

Authors:  Yu-Xin Xu; David Ashline; Li Liu; Carlos Tassa; Stanley Y Shaw; Katya Ravid; Matthew D Layne; Vernon Reinhold; Phillips W Robbins
Journal:  J Lipid Res       Date:  2014-12-20       Impact factor: 5.922

6.  A new hand-held microfluidic cytometer for evaluating irradiation damage by analysis of the damaged cells distribution.

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Journal:  Sci Rep       Date:  2016-03-17       Impact factor: 4.379

7.  Quantitative and Orthogonal Formation and Reactivity of SuFEx Platforms.

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8.  Protein Nano-Object Integrator (ProNOI) for generating atomic style objects for molecular modeling.

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9.  A label-free microfluidic biosensor for activity detection of single microalgae cells based on chlorophyll fluorescence.

Authors:  Junsheng Wang; Jinyang Sun; Yongxin Song; Yongyi Xu; Xinxiang Pan; Yeqing Sun; Dongqing Li
Journal:  Sensors (Basel)       Date:  2013-11-26       Impact factor: 3.576

  9 in total

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